University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Primary somatosensory cortex rostral part right


Abbreviation
S1r
Color       
Superior regionsPrimary somatosensory cortex

SynonymsAbbr.Language
Primary somatosensory cortex rostral partS1rEng
Rostral part of primary somatosensory cortex Eng

SubregionsSide
Primary somatosensory cortex rostral part layersright
Primary somatosensory cortex rostral most partright

Output to

NameSideAbbr.WeightDetails
Rostrodorsomedial part of the spinal trigeminal nucleus oral partcontraSp5RDMO3
Lateral striatumcontraCPul1.5
Lateral agranular prefrontal cortexcontraAGl2
Medial prefrontal cortex layer 5contramPFCL51
Medial prefrontal cortex layer 6contramPFCL61
Medial prefrontal cortex layer 3contramPFCL31
Medial prefrontal cortex layer 4contramPFCL41
Reticular formation at trigeminal motor nucleusipsiRF50
Intertrigeminal nucleusipsiI50.5
Juxtatrigeminal area dorsal partipsiJx5D2
Dorsal part of spinal trigeminal nucleus oral partipsiSp5OD-0.5
Rostrodorsomedial part of the spinal trigeminal nucleus oral partipsiSp5RDMO1
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL0
Paracentral thalamic nucleusipsiPC2
Parafascicular thalamic nucleusipsiPF2
Posterior thalamic nuclear groupipsiPo2
Mediodorsal thalamic nucleusipsiMD0
Ventral anterior-lateral complex of the thalamusipsiVAL0
Ventrolateral thalamic nucleusipsiVL1
Ventral posteromedial thalamic nucleusipsiVPM2
Ventromedial thalamic nucleusipsiVM1
Lateral striatumipsiCPul3
Subthalamic nucleusipsiSTh1.5
Medial prefrontal cortex layer 5ipsimPFCL52
Medial prefrontal cortex layer 6ipsimPFCL62
Medial prefrontal cortex layer 3ipsimPFCL32
Medial prefrontal cortex layer 4ipsimPFCL42

Input from

NameSideAbbr.WeightDetails
Substantia innominata nucleus basalis complexipsiSiNBC-0.5
Substantia innominata nucleus basalis complex medial partipsiSiNBCM-0.5
Substantia innominata nucleus basalis complex ventral partipsiSiNBCV-0.5
Central medial thalamic nucleusipsiCM0
Centrolateral thalamic nucleusipsiCL0
Paracentral thalamic nucleusipsiPC0
Parafascicular thalamic nucleusipsiPF0
Parafascicular thalamic nucleus ventrolateral partipsiPFvl1.5
Posterior thalamic nuclear groupipsiPo2
Mediodorsal thalamic nucleusipsiMD0
Ventral anterior-lateral complex of the thalamusipsiVAL0
Ventrolateral thalamic nucleusipsiVL0
Ventral posteromedial thalamic nucleusipsiVPM2
Ventrobasal complex lateral part lateral regionipsiVBLL2
Ventrobasal complex lateral part rostral partipsiVBLR2
Ventromedial thalamic nucleusipsiVM1
Visceral dysgranular insular cortex layer 2ipsiDIvL21
Visceral dysgranular insular cortex layer 3ipsiDIvL31
Deep layers of the dysgranular insular cortexipsiDIvDL1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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