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Rat connectome



Paracentral thalamic nucleus right


Abbreviation
PC
Color       
Superior regionsIntralaminar nuclei of the dorsal thalamus

SynonymsAbbr.Language
 Pc 
 PCN 
Paracentral nucleus of the thalamus  
Paracentral thalamic nucleusPCEng
 PC-cEng
Intralaminar paracentral thalamic nucleus Eng
Paracentral nucleusPCEng
Paracentral intralaminar thalamic nucleus Eng

SubregionsSide
Paracentral thalamic nucleus caudal partright
Paracentral thalamic nucleus dorsomedial partright
Paracentral thalamic nucleus posterior partright
Paracentral thalamic nucleus rostral partright
Paracentral thalamic nucleus rostrocaudal partright
Paracentral thalamic nucleus ventral portionright
Paracentral thalamic nucleus ventrolateral partright
Middle portion of the paracentral thalamic nucleusright
Paracentral thalamic nucleus dorsal partright

Output to

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleuscontraLDTg2.5
Pedunculopontine tegmental nucleuscontraPPTg1
Ventrolateral pontine reticular formationcontravlPRF0
Caudate putamencontraCPu3
Cerebral cortexcontraCEC0
Anterior cingulate cortexcontraACC2
Cingulate cortex area 1contraCg1-0.5
Cingulate cortex area 2contraCg2-0.5
Insular cortexcontraICX1
Agranular insular cortexcontraAI1
Agranular insular cortex dorsal partcontraAID-0.5
Agranular insular cortex rostral partcontraRAIC1
Dysgranular insular cortexcontraDI-0.5
Lateral agranular prefrontal cortexcontraAGl1
Caudal forelimb motor areacontraCFMA2
Jaw movement motor cortexcontraJMCx1
Whiskers motor cortexcontraWMCx-0.5
Medial agranular prefrontal cortexcontraAGm1
Cervical segment 7contraCS7-1
MesencephalonipsiMEC-0.5
Ventral tegmental area A10ipsiVTA1
Laterodorsal tegmental nucleusipsiLDTg2.5
Midbrain tegmentumipsiTGmi-0.5
Pedunculopontine tegmental nucleusipsiPPTg1
Ventrolateral pontine reticular formationipsivlPRF0
Lateral reticular nucleusipsiLRt2.5
Facial nucleusipsi72
Basal nucleus MeynertipsiB-1
Basal nucleus Meynert medial partipsiBmp2
HypothalamusipsiHYPO0
ThalamusipsiT-0.5
Anterior group of the dorsal thalamusipsiATN1
Anteromedial thalamic nucleusipsiAM1
Ventral anterior-lateral complex of the thalamusipsiVAL1
Ventrolateral thalamic nucleusipsiVL2
Reticular thalamic nucleusipsiRt2
Reticular thalamic nucleus intermediate partipsiRti3
Reticular thalamic nucleus rostral partipsiRtr-0.5
Reticular thalamic nucleus ventromedial partipsiRtvm3
Internal capsuleipsiic-2
Corpus callosumipsicc-0.5
Forceps minor of the corpus callosumipsifmi-2
Genu of the corpus callosumipsigcc-0.5
Dorsal bank of rhinal fissureipsiDBrf-0.5
Amygdaloid complexipsiAC1
Basal nucleusipsiBnc-1
Basal nucleus anterior subdivisionipsiBncA3
Basal nucleus ventral divisonipsiBncV2
Anterior basolateral nucleusipsiBLA1
Anterior basomedial nucleusipsiBMA1
Dorsolateral part of the lateral nucleusipsiLaDL2
Ventromedial part of the lateral nucleusipsiLaVM2
Bed nucleus of the stria terminalis lateral divisionipsiBSTL1
Bed nucleus of the stria terminalis medial divisionipsiBSTM1
Central amygdaloid nucleusipsiCe1
Posterolateral cortical nucleusipsiPLCo2
ClaustrumipsiCl1
Anterior part of the claustrumipsiACl2
Rostral part of claustrumipsiRCl2.5
Globus pallidusipsiGP3
Accumbens nucleusipsiAc1
Accumbens nucleus anterolateral partipsiAcAL2
Accumbens nucleus anteromedial partipsiAcAM0.5
Accumbens nucleus coreipsiAcbC2
Accumbens nucleus posterolateral partipsiAcbpl2
Accumbens nucleus shellipsiAcbSh1
Lateral accumbens shellipsiAcbShl3
Medial accumbens shellipsiAcbShm-0.5
Ventromedial shellipsiAcbShvm-0.5
Lateral nucleus accumbensipsiAcl1
Medial accumbensipsiAcbM1
Posteromedial accumbensipsiAcbPM0
Caudate putamenipsiCPu3
Anterior striatumipsiAStri2
Anteriorposterior part of caudate putamenipsiCPuAP2
Dorsomedial striatumipsiCPudm1
Medial striatumipsiCPum3
Caudal striatumipsiCPuc3
Central striatumipsiCPuce3
Dorsal striatumipsiCPud3
Dorsocentral striatumipsiDCS3
Dorsolateral striatumipsiCPudl2
Mediolateral striatumipsiCPuml1
Rostrocaudal striatumipsiCPurc1
Striatal matrix compartmentipsiSMC-0.5
Striatal patch compartmentipsiSPC-0.5
Ventral striatumipsiCPuv-0.5
Ventromedial striatumipsiCPuvm2
Jaw region of the striatumipsiCPuJaw3
Lateral striatumipsiCPul3
Fundus of the striatumipsiFS1
Striatal cell bridgesipsiStrCB1
Subthalamic nucleusipsiSTh2
Cerebral cortexipsiCEC-0.5
SubiculumipsiS1
Subiculum ventral partipsiSv1
Retrosplenial granular cortex caudal part layer 6 deep partipsiRSGc6d-0.5
Retrosplenial granular cortex layer 3ipsiRSGL31
Limbic regionsipsiLR0
Cingulate cortexipsiCg2
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex anterior part layer 1bipsiACCaL1b-0.5
Anterior cingulate cortex anterior part layer 2ipsiACCaL2-0.5
Anterior cingulate cortex anterior part layer 3ipsiACCaL3-0.5
Cingulate cortex area 1ipsiCg1-0.5
Cingulate cortex area 1 caudal partipsiCg1c2
Cingulate cortex area 1 rostral partipsiCg1r2
Cingulate cortex area 2ipsiCg2-0.5
Cingulate cortex area 2 caudal partipsiCg2c2
Cingulate area 2 layer 1ipsiCg2L14
Cingulate cortex area 2 deep half of layer 6ipsiCg2dhL6-0.5
Cingulate cortex area 3ipsiCg31
Dorsal anterior cingulate cortex layer 3ipsiDACCL33
Ventral anterior cingulate cortex layer 3ipsiVACCL33
Prelimbic cortexipsiPrL1
Prelimbic cortex layer 3ipsiPrLL3-0.5
Prelimbic cortex ventral part layer 3ipsiPrLvL33
Infralimbic cortexipsiIL1
Infralimbic cortex layer 3ipsiILL3-0.5
Frontal association cortexipsiFrA4
Rostral part of the dorsal part of frontal association cortexipsiFrARD-0.5
Caudal part of the dorsal part of frontal association cortexipsiFrACD-0.5
Frontal association cortex dorsal partipsiFrAd-0.5
Frontal association cortex lateral aspect layer 1ipsiFrALAL12.5
Frontal association cortex lateral aspect layer 3ipsiFrALAL32.5
Frontal association cortex lateral aspect layer 5ipsiFrALAL52.5
Frontal cortex area 1ipsiFr12
Frontal cortex area 1 layer 1ipsiFr1L13
Frontal cortex area 1 layer 1 outer quarteripsiFr1L1oq-0.5
Frontal cortex area 2ipsiFr22
Frontal cortex area 2 anterior partipsiFr2a2
Frontal cortex area 2 caudal partipsiFr2C1
Frontal cortex area 2 rostral partipsiFr2R1
Frontal cortex area 2 layer 3ipsiFr2L3-0.5
Frontal cortex area 2 layer 1bipsiFr2L1b-0.5
Frontal cortex area 2 layer 2ipsiFr2L2-0.5
Frontal cortex area 2 ventral part layer 3ipsiFr2vL32
Parietal association cortexipsiPtA2
Parietal cortex posterior areaipsiParP2
Parietal association cortex dorsomedial partipsiPtADM3
Parietal cortex area 1 dorsomedial partipsiPar1dm2
Temporal association area 3ipsiTe30
Auditory regionsipsiAU-0.5
Primary auditory cortexipsiAu12
Insular cortexipsiICX-0.5
Agranular insular cortexipsiAI3
Agranular insular cortex dorsal partipsiAID-0.5
Agranular insular cortex dorsal part layer 3ipsiAIDL3-0.5
Agranular insular cortex dorsal part superficial layersipsiAIDsL1
Agranular insular cortex posterior partipsiAIP1
Agranular insular cortex rostral partipsiRAIC2
Agranular insular cortex ventral part layer 3ipsiAIVL3-0.5
Agranular insular cortex ventral part jaw movement areaipsiAIVjm-0.5
Dysgranular insular cortexipsiDI2
Granular insular cortexipsiGI2
Perirhinal cortexipsiA351
Prefrontal cortexipsiPFC2
Medial sulcal areaipsiMeSA1
Prefrontal cortex dorsomedial partipsiPFCdm-1
Dorsolateral pregenual sector of the prefrontal cortexipsipgPFCdL1
Motoric regionsipsiM4
Lateral prefrontal cortexipsilPFC-1
Lateral agranular prefrontal cortexipsiAGl3
Forelimb motor cortexipsiFMCx2
Caudal forelimb motor areaipsiCFMA2
Elbow flexion motor cortexipsiEFMCx3
Rostral forelimb motor areaipsiRFMA3
Hindlimb motor cortexipsiHMCx2
Ankle dorsiflexion motor cortexipsiADFMCx2
Ankle plantar flexion motor cortexipsiAPFMCx0
Hip flexion motor cortexipsiHFMCx0
Lateral agranular prefrontal cortex layer 3ipsiAGlL3-0.5
Lateral agranular prefrontal cortex layer 5ipsiAGlL5-0.5
Rostral part of lateral agranular prefrontal cortexipsiAGlr1
Jaw movement motor cortexipsiJMCx2.5
Whiskers motor cortexipsiWMCx-0.5
Medial prefrontal cortexipsimPFC2
Medial agranular prefrontal cortexipsiAGm2
Medial agranular prefrontal cortex layer 3ipsiAGmL3-0.5
Medial agranular prefrontal cortex layer 5ipsiAGmL5-0.5
Medial agranular prefrontal cortex rostral partipsirAGm1
Posterior part of the medial agranular prefrontal cortexipsiPoAGm1
Sensory regionsipsiSR2
Primary somatosensory cortexipsiS12
Caudal whisker areaipsiCS1BF1
Rostral whisker areaipsiRS1BF1
Primary somatosensory cortex layer 5 aipsiS1L5a-0.5
Primary somatosensory cortex layer 6ipsiS1L63
Primary somatosensory cortex forelimb regionipsiS1FL2
Primary somatosensory cortex forelimb region rostral partipsiS1FLR2
Primary somatosensory cortex hindlimb regionipsiS1HL2
Primary somatosensory cortex trunk regionipsiS1Tr2
Primary somatosensory cortex rostral partipsiS1r0
Secondary somatosensory cortexipsiS22
Secondary somatosensory cortex layer 6ipsiS2L62
Visual regionsipsiVR1
Primary visual cortexipsiV12
Primary visual cortex layer 1ipsiV1L12
Lateral orbital cortexipsiLO3
Lateral orbital cortex layer 1bipsiLOLaL1b-0.5
Lateral orbital cortex layer 2ipsiLOLaL2-0.5
Lateral orbital cortex layer 3ipsiLOLaL33
Medial orbital cortexipsiMO2
Medial orbital cortex layer 3ipsiMOcxL32
Ventral orbital cortexipsiVO3
Ventral orbital cortex layer 1bipsiVOL1b-0.5
Ventral orbital cortex layer 2ipsiVOL2-0.5
Ventral orbital cortex layer 3ipsiVOL33
Ventrolateral orbital areaipsiVLO2
Ventrolateral orbital area layer 3ipsiVLOL3-0.5
Olfactory tubercleipsiTuO1
Olfactory tubercle lateral partipsiTuOL1
Lateral septal nucleusipsiLS2
Cervical segment 7ipsiCS7-1

Input from

NameSideAbbr.WeightDetails
Central graycontraCG1
Superior colliculus lateral partcontraSCL1
Superior colliculus intermediate and deep layerscontraSCidLa-0.5
Superior colliculus medial partcontramSC0.5
Substantia nigra reticular partcontraSNR0.5
Laterodorsal tegmental nucleuscontraLDTg3
Deep cerebellar nucleicontraDNC1.5
Locus coeruleuscontraLC1
Pontine sublaterodorsal nucleuscontraPsLdn3
Mesencephalic reticular formationcontraMRF3
Deep mesencephalic nucleuscontraDpMe0.5
Pontine reticular nucleus oral partcontraPnO3
Pontine reticular nucleus oral part central partcontraPnOC1
Pontine reticular nucleus oral part dorsal partcontraPnOd1
Ventrolateral pontine reticular formationcontravlPRF1
Pontine reticular nucleus caudal partcontraPNC3
Lateral parabrachial nucleus internal partcontraLPBI3
Gigantocellular reticular nucleuscontraGi3
Medullary reticular nucleus dorsal partcontraMdDd3
Principal sensory trigeminal nucleuscontraPr52
Barreletts of principal trigeminal nucleus ventral part A1contraPr5vA1-0.5
Barreletts of principal trigeminal nucleus ventral part A2contraPr5vA2-0.5
Barreletts of principal trigeminal nucleus ventral part A3contraPr5vA3-0.5
Barreletts of principal trigeminal nucleus ventral part A4contraPr5vA4-0.5
Barreletts of principal trigeminal nucleus ventral part B1contraPr5vB1-0.5
Barreletts of principal trigeminal nucleus ventral part B2contraPr5vB2-0.5
Barreletts of principal trigeminal nucleus ventral part B3contraPr5vB3-0.5
Barreletts of principal trigeminal nucleus ventral part B4contraPr5vB4-0.5
Barreletts of principal trigeminal nucleus ventral part C1contraPr5vC1-0.5
Barreletts of principal trigeminal nucleus ventral part C2contraPr5vC2-0.5
Barreletts of principal trigeminal nucleus ventral part C3contraPr5vC3-0.5
Barreletts of principal trigeminal nucleus ventral part C4contraPr5vC4-0.5
Barreletts of principal trigeminal nucleus ventral part C5contraPr5vC5-0.5
Barreletts of principal trigeminal nucleus ventral part D1contraPr5vD1-0.5
Barreletts of principal trigeminal nucleus ventral part D2contraPr5vD2-0.5
Barreletts of principal trigeminal nucleus ventral part D3contraPr5vD3-0.5
Barreletts of principal trigeminal nucleus ventral part D4contraPr5vD4-0.5
Barreletts of principal trigeminal nucleus ventral part D5contraPr5vD5-0.5
Barreletts of principal trigeminal nucleus ventral part D6contraPr5vD6-0.5
Barreletts of principal trigeminal nucleus ventral part E1contraPr5vE1-0.5
Barreletts of principal trigeminal nucleus ventral part E2contraPr5vE2-0.5
Barreletts of principal trigeminal nucleus ventral part E3contraPr5vE3-0.5
Barreletts of principal trigeminal nucleus ventral part E4contraPr5vE4-0.5
Barreletts of principal trigeminal nucleus ventral part E5contraPr5vE5-0.5
Barreletts of principal trigeminal nucleus ventral part E6contraPr5vE6-0.5
Barreletts of principal trigeminal nucleus ventral part E7contraPr5vE7-0.5
Spinal vestibular nucleuscontraSpVe-2
Medial vestibular nucleuscontraMVe-0.5
Dorsal raphe nucleuscontraDR1
Median raphe nucleuscontraMnR1
Cuneate nucleuscontraCu2
GracilecontraGra2
Reticular thalamic nucleus rostral partcontraRtr0
Caudal part of reticular thalamic nucleus rostral partcontraRtrC0
Ventrolateral part of reticular thalamic nucleus rostral partcontraRtrVL0
Zona incertacontraZI1
Globus palliduscontraGP0
Caudate putamencontraCPu1
Frontal association cortexcontraFrA2
Parietal association cortexcontraPtA0
Agranular insular cortexcontraAI1
Lateral agranular prefrontal cortexcontraAGl1
Caudal forelimb motor areacontraCFMA2
Jaw movement motor cortexcontraJMCx1
Medial agranular prefrontal cortex rostral partcontrarAGm1
Interpeduncular nucleuscontraIP1
Spinal cordcontraMES2
Cervical segment 1contraCS14
Nucleus of dorsolateral funiculus C1contraNDLFC11.5
Area X C1contraSCL10C11.5
Spinal cord layer 5 C1contraSCL5C12.5
Spinal cord layer 1 C1contraSCL1C11.5
Spinal cord layer 7 C1contraSCL7C12.5
Cervical segment 2contraCS24
Nucleus of dorsolateral funiculus C2contraNDLFC21.5
Area X C2contraSCL10C21.5
Spinal cord layer 5 C2contraSCL5C22.5
Spinal cord layer 1 C2contraSCL1C21.5
Spinal cord layer 7 C2contraSCL7C22.5
Cervical segment 3contraCS33
Nucleus of dorsolateral funiculus C3contraNDLFC31.5
Area X C3contraSCL10C31.5
Spinal cord layer 5 C3contraSCL5C32.5
Spinal cord layer 1 C3contraSCL1C31.5
Spinal cord layer 7 C3contraSCL7C32.5
Cervical segment 4contraCS42
Nucleus of dorsolateral funiculus C4contraNDLFC41.5
Area X C4contraSCL10C41.5
Spinal cord layer 5 C4contraSCL5C42.5
Spinal cord layer 1 C4contraSCL1C41.5
Spinal cord layer 7 C4contraSCL7C42.5
Cervical segment 5contraCS52
Nucleus of dorsolateral funiculus C5contraNDLFC51.5
Area X C5contraSCL10C51.5
Spinal cord layer 5 C5contraSCL5C52.5
Spinal cord layer 1 C5contraSCL1C51.5
Spinal cord layer 7 C5contraSCL7C52.5
Cervical segment 6contraCS61
Nucleus of dorsolateral funiculus C6contraNDLFC61.5
Area X C6contraSCL10C61.5
Spinal cord layer 5 C6contraSCL5C62.5
Spinal cord layer 1 C6contraSCL1C61.5
Spinal cord layer 7 C6contraSCL7C62.5
Cervical segment 7contraCS72
Nucleus of dorsolateral funiculus C7contraNDLFC71.5
Area X C7contraSCL10C71.5
Spinal cord layer 5 C7contraSCL5C72.5
Spinal cord layer 1 C7contraSCL1C71.5
Spinal cord layer 7 C7contraSCL7C72.5
Cervical segment 8contraCS82
Nucleus of dorsolateral funiculus C8contraNDLFC81.5
Area X C8contraSCL10C81.5
Spinal cord layer 5 C8contraSCL5C82.5
Spinal cord layer 1 C8contraSCL1C81.5
Spinal cord layer 7 C8contraSCL7C82.5
Thoracal segment 1contraT11
Nucleus of dorsolateral funiculus T1contraNDLFT11.5
Area X T1contraSCL10T11.5
Spinal cord layer 5 T1contraSCL5T12.5
Spinal cord layer 1 T1contraSCL1T11.5
Spinal cord layer 7 T1contraSCL7T12.5
Thoracal segment 2contraT21
Nucleus of dorsolateral funiculus T2contraNDLFT21.5
Area X T2contraSCL10T21.5
Spinal cord layer 5 T2contraSCL5T22.5
Spinal cord layer 1 T2contraSCL1T21.5
Spinal cord layer 7 T2contraSCL7T22.5
Thoracal segment 3contraT31
Nucleus of dorsolateral funiculus T3contraNDLFT31.5
Area X T3contraSCL10T31.5
Spinal cord layer 5 T3contraSCL5T32.5
Spinal cord layer 1 T3contraSCL1T31.5
Spinal cord layer 7 T3contraSCL7T32.5
Thoracal segment 4contraT40.5
Nucleus of dorsolateral funiculus T4contraNDLFT41.5
Area X T4contraSCL10T41.5
Spinal cord layer 5 T4contraSCL5T42.5
Spinal cord layer 1 T4contraSCL1T41.5
Spinal cord layer 7 T4contraSCL7T42.5
Thoracal segment 5contraT50.5
Nucleus of dorsolateral funiculus T5contraNDLFT51.5
Area X T5contraSCL10T51.5
Spinal cord layer 5 T5contraSCL5T52.5
Spinal cord layer 1 T5contraSCL1T51.5
Spinal cord layer 7 T5contraSCL7T52.5
Thoracal segment 6contraT60.5
Nucleus of dorsolateral funiculus T6contraNDLFT61.5
Area X T6contraSCL10T61.5
Spinal cord layer 5 T6contraSCL5T62.5
Spinal cord layer 1 T6contraSCL1T61.5
Spinal cord layer 7 T6contraSCL7T62.5
Thoracal segment 7contraT71
Nucleus of dorsolateral funiculus T7contraNDLFT71.5
Area X T7contraSCL10T71.5
Spinal cord layer 5 T7contraSCL5T72.5
Spinal cord layer 1 T7contraSCL1T71.5
Spinal cord layer 7 T7contraSCL7T72.5
Thoracal segment 8contraT80.5
Nucleus of dorsolateral funiculus T8contraNDLFT81.5
Area X T8contraSCL10T81.5
Spinal cord layer 5 T8contraSCL5T82.5
Spinal cord layer 1 T8contraSCL1T81.5
Spinal cord layer 7 T8contraSCL7T82.5
Thoracal segment 9contraT92
Nucleus of dorsolateral funiculus T9contraNDLFT91.5
Area X T9contraSCL10T91.5
Spinal cord layer 5 T9contraSCL5T92.5
Spinal cord layer 1 T9contraSCL1T91.5
Spinal cord layer 7 T9contraSCL7T92.5
Thoracal segment 10contraT102
Nucleus of dorsolateral funiculus T10contraNDLFT101.5
Area X T10contraSCL10T101.5
Spinal cord layer 5 T10contraSCL5T102.5
Spinal cord layer 1 T10contraSCL1T101.5
Spinal cord layer 7 T10contraSCL7T102.5
Thoracal segment 11contraT112
Nucleus of dorsolateral funiculus T11contraNDLFT111.5
Area X T11contraSCL10T111.5
Spinal cord layer 5 T11contraSCL5T112.5
Spinal cord layer 1 T11contraSCL1T111.5
Spinal cord layer 7 T11contraSCL7T112.5
Thoracal segment 12contraT121
Nucleus of dorsolateral funiculus T12contraNDLFT121.5
Area X T12contraSCL10T121.5
Spinal cord layer 5 T12contraSCL5T122.5
Spinal cord layer 1 T12contraSCL1T121.5
Spinal cord layer 7 T12contraSCL7T122.5
Thoracal segment 13contraT131
Nucleus of dorsolateral funiculus T13contraNDLFT131.5
Area X T13contraSCL10T131.5
Spinal cord layer 5 T13contraSCL5T132.5
Spinal cord layer 1 T13contraSCL1T131.5
Spinal cord layer 7 T13contraSCL7T132.5
Lumbar segment 1contraL13
Nucleus of dorsolateral funiculus L1contraNDLFL11.5
Area X L1contraSCL10L11.5
Spinal cord layer 5 L1contraSCL5L12.5
Spinal cord layer 1 L1contraSCL1L11.5
Spinal cord layer 7 L1contraSCL7L12.5
Lumbar segment 2contraL23
Nucleus of dorsolateral funiculus L2contraNDLFL21.5
Area X L2contraSCL10L21.5
Spinal cord layer 5 L2contraSCL5L22.5
Spinal cord layer 1 L2contraSCL1L21.5
Spinal cord layer 7 L2contraSCL7L22.5
Lumbar segment 3contraL33
Nucleus of dorsolateral funiculus L3contraNDLFL31.5
Area X L3contraSCL10L31.5
Spinal cord layer 5 L3contraSCL5L32.5
Spinal cord layer 1 L3contraSCL1L31.5
Spinal cord layer 7 L3contraSCL7L32.5
Lumbar segment 4contraL42
Nucleus of dorsolateral funiculus L4contraNDLFL41.5
Area X L4contraSCL10L41.5
Spinal cord layer 5 L4contraSCL5L42.5
Spinal cord layer 1 L4contraSCL1L41.5
Spinal cord layer 7 L4contraSCL7L42.5
Lumbar segment 5contraL52
Nucleus of dorsolateral funiculus L5contraNDLFL51.5
Area X L5contraSCL10L51.5
Spinal cord layer 5 L5contraSCL5L52.5
Spinal cord layer 1 L5contraSCL1L51.5
Spinal cord layer 7 L5contraSCL7L52.5
Lumbar segment 6contraL63
Nucleus of dorsolateral funiculus L6contraNDLFL61.5
Area X L6contraSCL10L61.5
Spinal cord layer 5 L6contraSCL5L62.5
Spinal cord layer 1 L6contraSCL1L61.5
Spinal cord layer 7 L6contraSCL7L62.5
Sacral segment 1contraSa13
Area X S1contraSCL10S11.5
Spinal cord layer 5 S1contraSCL5S12.5
Spinal cord layer 1 S1contraSCL1S11.5
Spinal cord layer 7 S1contraSCL7S12.5
Sacral segment 2contraSa23
Area X S2contraSCL10S21.5
Spinal cord layer 5 S2contraSCL5S22.5
Spinal cord layer 1 S2contraSCL1S21.5
Spinal cord layer 7 S2contraSCL7S22.5
Sacral segment 3contraSa31
Area X S3contraSCL10S31.5
Spinal cord layer 5 S3contraSCL5S32.5
Spinal cord layer 1 S3contraSCL1S31.5
Spinal cord layer 7 S3contraSCL7S32.5
Sacral segment 4contraSa41
Area X S4contraSCL10S41.5
Spinal cord layer 5 S4contraSCL5S42.5
Spinal cord layer 1 S4contraSCL1S41.5
Spinal cord layer 7 S4contraSCL7S42.5
Coccygeal segment 1contraCo11
Coccygeal segment 2contraCo21
Coccygeal segment 3contraCo31
MesencephalonipsiMEC2
Central grayipsiCG3
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF1
Nucleus of DarkschewitschipsiDk2
Periaqueductal grayipsiPAG2
Dorsolateral periaqueductal grayipsiDLPAG1
Dorsolateral periaqueductal gray caudal partipsiPAGdlc1
Dorsolateral periaqueductal gray rostral partipsiPAGdlr1
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray caudal dorsolateral partipsiPAGLDC1
Periaqueductal gray rostrolateral partipsiPAGRL1
Periaqueductal gray rostrocaudal extentipsiPAGroe1
Ventral periaqueductal grayipsiVPAG1.5
Ventrolateral periaqueductal grayipsiVLPAG2
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventrolateral periaqueductal gray rostral partipsiPAGvlr1
Periventricular gray matteripsiPVG0
Superior colliculusipsiSC4
Superior colliculus lateral partipsiSCL2
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Anterior part of superior colliculus intermediate layersipsiASCi2
Superior colliculus medial partipsimSC1
Tegmental areaipsiTGA2
Central tegmental fieldipsiTGAC2
Subpeduncular tegmental nucleusipsiSPTg1
Substantia nigra A9ipsiSN2
Substantia nigra compact partipsiSNC2
Substantia nigra compact part ventral tieripsiSNCV2
Substantia nigra compact part ventral tier dopaminergic neuron populationipsiSNCVdopa0.5
Substantia nigra lateral partipsiSNL3
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part caudal tieripsiSNRca1
Substantia nigra reticular part dorsomedial tieripsiSNRDM2
Substantia nigra reticular part medial tieripsiSNRm3
Substantia nigra reticular part rostral tieripsiSNRro2
Substantia nigra reticular part ventral subdivisionipsiSNRv3
Substantia nigra reticular part rostral part of the ventral subdivisionipsiSNRrov3
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg2
Pedunculopontine tegmental nucleusipsiPPTg2
Edinger Westphal nucleusipsiEW2
Interstitial nucleus of CajalipsiInC1
Locus coeruleusipsiLC3
Pontine sublaterodorsal nucleusipsiPsLdn3
Medial reticular formationipsiRFm3
Mesencephalic reticular formationipsiMRF3
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus oral part central partipsiPnOC3
Pontine reticular nucleus oral part dorsal partipsiPnOd3
Ventrolateral pontine reticular formationipsivlPRF2
Pontine reticular nucleus caudal partipsiPNC2
Parabrachial nucleusipsiPB2
Lateral parabrachial nucleus internal partipsiLPBI2
Parabrachial nucleus ventral partipsiPBV2
Parabrachial nucleus ventrolateral partipsiPBveLa-0.5
Gigantocellular reticular nucleusipsiGi3
Subnucleus reticularis dorsalisipsiSRD1
Medial medullary reticular nucleusipsiMMdD-0.5
Medullary reticular nucleus dorsal partipsiMdDd2
Parvicellular reticular nucleusipsiPCRt3
Supratrigeminal nucleusipsiSu5-0.5
Principal sensory trigeminal nucleusipsiPr51
Anterior part of spinal trigeminal nucleus oral partipsiSp5OA2
Spinal vestibular nucleusipsiSpVe2
Superior vestibular nucleusipsiSuVe2
Medial vestibular nucleusipsiMVe3
Lateral vestibular nucleusipsiLVe1
Inferior vestibular nucleusipsiIVN3
Raphe nucleiipsiRAN1
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus caudal partipsiDRC2
Dorsal raphe nucleus rostral partipsiDRr2
Median raphe nucleusipsiMnR3
Pontine raphe nucleusipsiPnR1.5
Raphe magnus nucleusipsiRMg1.5
Cuneate nucleusipsiCu1
GracileipsiGra1
Dorsal paragigantocellular nucleusipsiDPGi3
Nucleus of the diagonal band of Broca dorsal partipsiVDBD2.5
Substantia innominataipsiSI1
Substantia innominata dorsal partipsiSID2.5
Lateral preoptic areaipsiLPO2
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar0
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR0
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp0
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm0
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa0
Lateral hypothalamic area perifornical partipsiPFx2
Lateral hypothalamic area posterior partipsiLHAp2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic nucleus caudal partipsiPHCa2
Posterior hypothalamic nucleus rostral partipsiPHRo3
Incerto hypothalamic areaipsiicHYPO1
Supramammillar nucleus lateral part lateral subpartipsiSuMLL1
Supramammillar nucleus lateral part medial subpartipsiSuMLM2
Supramammillar nucleus medial partipsiSuMM1
A8 dopamine cells retrorubral groupipsiRRF2
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus medial partipsiRtm1
Reticular thalamic nucleus rostral partipsiRtr3
Caudal part of reticular thalamic nucleus rostral partipsiRtrC2
Ventrolateral part of reticular thalamic nucleus rostral partipsiRtrVL3
Zona incertaipsiZI2
Dorsolateral aspect of rostral extent of zona incertaipsiZIRdL2.5
Pretectal regionipsiPRT0
Anterior pretectal nucleusipsiAPT-0.5
Anterior basomedial nucleusipsiBMA-0.5
Posterior basomedial nucleusipsiBMP-0.5
Medial amygdaloid nucleusipsiMe2
Anterior part of the claustrumipsiACl1
Globus pallidusipsiGP2.5
Ventral pallidumipsiVP2.5
Ventral pallidum caudal partipsiVPc2
Ventral pallidum lateral partipsiVPlp2
Caudate putamenipsiCPu2
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC1
Prelimbic cortexipsiPrL0
Infralimbic cortexipsiIL0
Frontal association cortexipsiFrA3
Frontal cortex area 2ipsiFr2-0.5
Parietal association cortexipsiPtA1.5
Insular cortexipsiICX3
Agranular insular cortexipsiAI3
Agranular insular cortex ventral part jaw movement areaipsiAIVjm-0.5
Dorsal granular insular cortexipsiDGI1
Motoric regionsipsiM-0.5
Lateral agranular prefrontal cortexipsiAGl2.5
Caudal forelimb motor areaipsiCFMA2
Rostral part of lateral agranular prefrontal cortexipsiAGlr1
Orofacial motor cortexipsiOFCx1
Jaw movement motor cortexipsiJMCx2.5
Medial prefrontal cortexipsimPFC-1
Medial agranular prefrontal cortexipsiAGm2
Medial agranular prefrontal cortex caudal partipsicAGm1
Medial agranular prefrontal cortex rostral partipsirAGm3
Posterior part of the medial agranular prefrontal cortexipsiPoAGm1
Primary somatosensory cortex face regionipsiS1FR1
Primary somatosensory cortex rostral partipsiS1r2
Primary visual cortexipsiV1-0.5
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO0
Interpeduncular nucleusipsiIP2
Spinal cordipsiMES1
Cervical segment 1ipsiCS1-3
Intermediomedial cell column C1ipsiIMMC1-3
Lateral cervical nucleus C1ipsiLatCC1-3
Lateral spinal nucleus C1ipsiLSpC1-3
Nucleus of dorsolateral funiculus C1ipsiNDLFC11
Area X C1ipsiSCL10C11
Dorsal horn C1ipsiDHC1-3
Spinal cord layer 5 C1ipsiSCL5C12
Spinal cord layer 1 C1ipsiSCL1C11
Spinal cord layer 7 C1ipsiSCL7C12
Cervical segment 2ipsiCS2-3
Intermediomedial cell column C2ipsiIMMC2-3
Lateral cervical nucleus C2ipsiLatCC2-3
Lateral spinal nucleus C2ipsiLSpC2-3
Nucleus of dorsolateral funiculus C2ipsiNDLFC21
Area X C2ipsiSCL10C21
Dorsal horn C2ipsiDHC2-3
Spinal cord layer 5 C2ipsiSCL5C22
Spinal cord layer 1 C2ipsiSCL1C21
Spinal cord layer 7 C2ipsiSCL7C22
Nucleus of dorsolateral funiculus C3ipsiNDLFC31
Area X C3ipsiSCL10C31
Spinal cord layer 5 C3ipsiSCL5C32
Spinal cord layer 1 C3ipsiSCL1C31
Spinal cord layer 7 C3ipsiSCL7C32
Cervical segment 4ipsiCS4-3
Intermediomedial cell column C4ipsiIMMC4-3
Lateral cervical nucleus C4ipsiLatCC4-3
Lateral spinal nucleus C4ipsiLSpC4-3
Nucleus of dorsolateral funiculus C4ipsiNDLFC41
Area X C4ipsiSCL10C41
Dorsal horn C4ipsiDHC4-3
Spinal cord layer 5 C4ipsiSCL5C42
Spinal cord layer 1 C4ipsiSCL1C41
Spinal cord layer 7 C4ipsiSCL7C42
Cervical segment 5ipsiCS5-3
Intermediomedial cell column C5ipsiIMMC5-3
Lateral cervical nucleus C5ipsiLatCC5-3
Lateral spinal nucleus C5ipsiLSpC5-3
Nucleus of dorsolateral funiculus C5ipsiNDLFC51
Area X C5ipsiSCL10C51
Dorsal horn C5ipsiDHC5-3
Spinal cord layer 5 C5ipsiSCL5C52
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 7 C5ipsiSCL7C52
Nucleus of dorsolateral funiculus C6ipsiNDLFC61
Area X C6ipsiSCL10C61
Spinal cord layer 5 C6ipsiSCL5C62
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 7 C6ipsiSCL7C62
Cervical segment 7ipsiCS7-3
Intermediomedial cell column C7ipsiIMMC7-3
Lateral cervical nucleus C7ipsiLatCC7-3
Lateral spinal nucleus C7ipsiLSpC7-3
Nucleus of dorsolateral funiculus C7ipsiNDLFC71
Area X C7ipsiSCL10C71
Dorsal horn C7ipsiDHC7-3
Spinal cord layer 5 C7ipsiSCL5C72
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 7 C7ipsiSCL7C72
Cervical segment 8ipsiCS8-3
Intermediomedial cell column C8ipsiIMMC8-3
Lateral cervical nucleus C8ipsiLatCC8-3
Lateral spinal nucleus C8ipsiLSpC8-3
Nucleus of dorsolateral funiculus C8ipsiNDLFC81
Area X C8ipsiSCL10C81
Dorsal horn C8ipsiDHC8-3
Spinal cord layer 5 C8ipsiSCL5C82
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 7 C8ipsiSCL7C82
Nucleus of dorsolateral funiculus T1ipsiNDLFT11
Area X T1ipsiSCL10T11
Spinal cord layer 5 T1ipsiSCL5T12
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 7 T1ipsiSCL7T12
Nucleus of dorsolateral funiculus T2ipsiNDLFT21
Area X T2ipsiSCL10T21
Spinal cord layer 5 T2ipsiSCL5T22
Spinal cord layer 1 T2ipsiSCL1T21
Spinal cord layer 7 T2ipsiSCL7T22
Nucleus of dorsolateral funiculus T3ipsiNDLFT31
Area X T3ipsiSCL10T31
Spinal cord layer 5 T3ipsiSCL5T32
Spinal cord layer 1 T3ipsiSCL1T31
Spinal cord layer 7 T3ipsiSCL7T32
Thoracal segment 4ipsiT4-3
Intermediomedial cell column T4ipsiIMMT4-3
Lateral spinal nucleus T4ipsiLSpT4-3
Nucleus of dorsolateral funiculus T4ipsiNDLFT41
Area X T4ipsiSCL10T41
Dorsal horn T4ipsiDHT4-3
Spinal cord layer 5 T4ipsiSCL5T42
Spinal cord layer 1 T4ipsiSCL1T41
Spinal cord layer 7 T4ipsiSCL7T42
Nucleus of dorsolateral funiculus T5ipsiNDLFT51
Area X T5ipsiSCL10T51
Spinal cord layer 5 T5ipsiSCL5T52
Spinal cord layer 1 T5ipsiSCL1T51
Spinal cord layer 7 T5ipsiSCL7T52
Nucleus of dorsolateral funiculus T6ipsiNDLFT61
Area X T6ipsiSCL10T61
Spinal cord layer 5 T6ipsiSCL5T62
Spinal cord layer 1 T6ipsiSCL1T61
Spinal cord layer 7 T6ipsiSCL7T62
Nucleus of dorsolateral funiculus T7ipsiNDLFT71
Area X T7ipsiSCL10T71
Spinal cord layer 5 T7ipsiSCL5T72
Spinal cord layer 1 T7ipsiSCL1T71
Spinal cord layer 7 T7ipsiSCL7T72
Thoracal segment 8ipsiT8-3
Intermediomedial cell column T8ipsiIMMT8-3
Lateral spinal nucleus T8ipsiLSpT8-3
Nucleus of dorsolateral funiculus T8ipsiNDLFT81
Area X T8ipsiSCL10T81
Dorsal horn T8ipsiDHT8-3
Spinal cord layer 5 T8ipsiSCL5T82
Spinal cord layer 1 T8ipsiSCL1T81
Spinal cord layer 7 T8ipsiSCL7T82
Nucleus of dorsolateral funiculus T9ipsiNDLFT91
Area X T9ipsiSCL10T91
Spinal cord layer 5 T9ipsiSCL5T92
Spinal cord layer 1 T9ipsiSCL1T91
Spinal cord layer 7 T9ipsiSCL7T92
Nucleus of dorsolateral funiculus T10ipsiNDLFT101
Area X T10ipsiSCL10T101
Spinal cord layer 5 T10ipsiSCL5T102
Spinal cord layer 1 T10ipsiSCL1T101
Spinal cord layer 7 T10ipsiSCL7T102
Nucleus of dorsolateral funiculus T11ipsiNDLFT111
Area X T11ipsiSCL10T111
Spinal cord layer 5 T11ipsiSCL5T112
Spinal cord layer 1 T11ipsiSCL1T111
Spinal cord layer 7 T11ipsiSCL7T112
Thoracal segment 12ipsiT12-3
Intermediomedial cell column T12ipsiIMMT12-3
Lateral spinal nucleus T12ipsiLSpT12-3
Nucleus of dorsolateral funiculus T12ipsiNDLFT121
Area X T12ipsiSCL10T121
Dorsal horn T12ipsiDHT12-3
Spinal cord layer 5 T12ipsiSCL5T122
Spinal cord layer 1 T12ipsiSCL1T121
Spinal cord layer 7 T12ipsiSCL7T122
Nucleus of dorsolateral funiculus T13ipsiNDLFT131
Area X T13ipsiSCL10T131
Spinal cord layer 5 T13ipsiSCL5T132
Spinal cord layer 1 T13ipsiSCL1T131
Spinal cord layer 7 T13ipsiSCL7T132
Lumbar segment 1ipsiL1-3
Intermediomedial cell column L1ipsiIMML1-3
Lateral spinal nucleus L1ipsiLSpL1-3
Nucleus of dorsolateral funiculus L1ipsiNDLFL11
Area X L1ipsiSCL10L11
Dorsal horn L1ipsiDHL1-3
Spinal cord layer 5 L1ipsiSCL5L12
Spinal cord layer 1 L1ipsiSCL1L11
Spinal cord layer 7 L1ipsiSCL7L12
Lumbar segment 2ipsiL2-3
Intermediomedial cell column L2ipsiIMML2-3
Lateral spinal nucleus L2ipsiLSpL2-3
Nucleus of dorsolateral funiculus L2ipsiNDLFL21
Area X L2ipsiSCL10L21
Dorsal horn L2ipsiDHL2-3
Spinal cord layer 5 L2ipsiSCL5L22
Spinal cord layer 1 L2ipsiSCL1L21
Spinal cord layer 7 L2ipsiSCL7L22
Lumbar segment 3ipsiL3-3
Intermediomedial cell column L3ipsiIMML3-3
Lateral spinal nucleus L3ipsiLSpL3-3
Nucleus of dorsolateral funiculus L3ipsiNDLFL31
Area X L3ipsiSCL10L31
Dorsal horn L3ipsiDHL3-3
Spinal cord layer 5 L3ipsiSCL5L32
Spinal cord layer 1 L3ipsiSCL1L31
Spinal cord layer 7 L3ipsiSCL7L32
Lumbar segment 4ipsiL4-3
Intermediomedial cell column L4ipsiIMML4-3
Lateral spinal nucleus L4ipsiLSpL4-3
Nucleus of dorsolateral funiculus L4ipsiNDLFL41
Area X L4ipsiSCL10L41
Dorsal horn L4ipsiDHL4-3
Spinal cord layer 5 L4ipsiSCL5L42
Spinal cord layer 1 L4ipsiSCL1L41
Spinal cord layer 7 L4ipsiSCL7L42
Lumbar segment 5ipsiL5-3
Intermediomedial cell column L5ipsiIMML5-3
Lateral spinal nucleus L5ipsiLSpL5-3
Nucleus of dorsolateral funiculus L5ipsiNDLFL51
Area X L5ipsiSCL10L51
Dorsal horn L5ipsiDHL5-3
Spinal cord layer 5 L5ipsiSCL5L52
Spinal cord layer 1 L5ipsiSCL1L51
Spinal cord layer 7 L5ipsiSCL7L52
Lumbar segment 6ipsiL6-3
Intermediomedial cell column L6ipsiIMML6-3
Lateral spinal nucleus L6ipsiLSpL6-3
Nucleus of dorsolateral funiculus L6ipsiNDLFL61
Area X L6ipsiSCL10L61
Dorsal horn L6ipsiDHL6-3
Spinal cord layer 5 L6ipsiSCL5L62
Spinal cord layer 1 L6ipsiSCL1L61
Spinal cord layer 7 L6ipsiSCL7L62
Area X S1ipsiSCL10S11
Spinal cord layer 5 S1ipsiSCL5S12
Spinal cord layer 1 S1ipsiSCL1S11
Spinal cord layer 7 S1ipsiSCL7S12
Sacral segment 2ipsiSa2-3
Intermediomedial cell column S2ipsiIMMS2-3
Lateral spinal nucleus S2ipsiLSpS2-3
Area X S2ipsiSCL10S21
Dorsal horn S2ipsiDHS2-3
Spinal cord layer 5 S2ipsiSCL5S22
Spinal cord layer 1 S2ipsiSCL1S21
Spinal cord layer 7 S2ipsiSCL7S22
Area X S3ipsiSCL10S31
Spinal cord layer 5 S3ipsiSCL5S32
Spinal cord layer 1 S3ipsiSCL1S31
Spinal cord layer 7 S3ipsiSCL7S32
Area X S4ipsiSCL10S41
Spinal cord layer 5 S4ipsiSCL5S42
Spinal cord layer 1 S4ipsiSCL1S41
Spinal cord layer 7 S4ipsiSCL7S42

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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