University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Centrolateral thalamic nucleus right


Abbreviation
CL
Color       
Superior regionsIntralaminar nuclei of the dorsal thalamus

SynonymsAbbr.Language
Central lateral intralaminar thalamic nucleus  
Central lateral nucleus of the thalamus  
Central lateral nucleus thalamus Eng
Centrolateral nucleus of the intralaminar group Eng
Centrolateral thalamic nucleusCLEng
Central lateral thalamic nucleus  
Central lateral nucleusCLEng

SubregionsSide
Centrolateral thalamic nucleus anteromedial partright
Centrolateral thalamic nucleus caudal partright
Centrolateral thalamic nucleus dorsal partright
Centrolateral thalamic nucleus dorsomedial partright
Centrolateral thalamic nucleus medial partright
Centrolateral thalamic nucleus posterior partright
Centrolateral thalamic nucleus posterolateral partright
Centrolateral thalamic nucleus rostral partright
Centrolateral thalamic nucleus ventral portionright
Centrolateral thalamic nucleus ventrolateral partright
Region between centrolateral thalamic nucleus and the ventrolateral thalamic nucleus caudal partright
Centrolateral thalamic nucleus lateral partright
Centrolateral thalamic nucleus bushy cellsright

Output to

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleuscontraLDTg2.5
Pedunculopontine tegmental nucleuscontraPPTg1
Pontine reticular nucleuscontraPRN0
Ventrolateral pontine reticular formationcontravlPRF0
Dorsal thalamuscontraDOR0
Mediodorsal thalamic nucleuscontraMD1
Reticular thalamic nucleuscontraRt2
Zona incertacontraZI-0.5
Zona incerta dorsal partcontraZID2
Cerebral cortexcontraCEC0
Anterior cingulate cortexcontraACC2
Cingulate cortex area 1contraCg1-0.5
Cingulate cortex area 2contraCg2-0.5
Prelimbic cortexcontraPrL1
Insular cortexcontraICX1
Dysgranular insular cortexcontraDI-0.5
Motoric regionscontraM0
Lateral agranular prefrontal cortexcontraAGl1
Whiskers motor cortexcontraWMCx-0.5
Medial prefrontal cortexcontramPFC-0.5
Medial agranular prefrontal cortexcontraAGm2
Intergeniculate leafcontraIGL0.5
Intergeniculate leaf parvocellular laminacontraIGLpc0.5
Ventral lateral geniculate nucleuscontraVLG0.5
Central gray pons partipsiCGP3
Ventral tegmental area A10ipsiVTA1
Laterodorsal tegmental nucleusipsiLDTg2.5
Pedunculopontine tegmental nucleusipsiPPTg1
Pedunculopontine tegmental nucleus pars compactaipsiPPNC1
Paraflocculus ventral partipsiPFlv-0.5
FlocculusipsiFl-0.5
Pontine reticular nucleusipsiPRN0
Ventrolateral pontine reticular formationipsivlPRF0
Taste related region of the pontine reticular nucleusipsiPRNtr-0.5
Lateral reticular nucleusipsiLRt2.5
Facial nucleusipsi72
Dorsal raphe nucleusipsiDR3
Median raphe nucleusipsiMnR3
Median preoptic nucleusipsiMnPO1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Lateroanterior hypothalamic nucleusipsiLAH-0.5
ThalamusipsiT0
Anterior group of the dorsal thalamusipsiATN1
Mediodorsal thalamic nucleusipsiMD3
Ventral anterior-lateral complex of the thalamusipsiVAL1
Ventrolateral thalamic nucleusipsiVL-0.5
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Ventral posteromedial thalamic nucleusipsiVPM-0.5
Laterodorsal thalamic nucleusipsiLD-2
Ventral thalamusipsiVNT1.5
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus caudal partipsiRtc1
Reticular thalamic nucleus external partipsiRtex2
Reticular thalamic nucleus intermediate partipsiRti3
Reticular thalamic nucleus rostral partipsiRtr-0.5
Reticular thalamic nucleus ventromedial partipsiRtvm2
Zona incertaipsiZI3
Zona incerta dorsal partipsiZID3
Internal capsuleipsiic-0.5
Amygdaloid complexipsiAC0
Basal gangliaipsiBG3
Anterior part of the claustrumipsiACl3
Rostral part of claustrumipsiRCl2
Globus pallidusipsiGP3
Lateral globus pallidusipsiLGP3
Medial globus pallidusipsiMGP2
StriatumipsiSTR2
Accumbens nucleusipsiAc0
Accumbens nucleus anteromedial partipsiAcAM1
Accumbens nucleus coreipsiAcbC3
Caudate putamenipsiCPu3
Anterior striatumipsiAStri2
Anteriorposterior part of caudate putamenipsiCPuAP2
Associative striatumipsiACPu3
Dorsomedial striatumipsiCPudm2
Medial striatumipsiCPum2
Caudal striatumipsiCPuc3
Central striatumipsiCPuce2
Dorsal striatumipsiCPud3
Dorsocentral striatumipsiDCS2
Dorsolateral striatumipsiCPudl2
Mediolateral striatumipsiCPuml1
Rostral striatum ventromedial partipsiCPurVM2.5
Rostrocaudal striatumipsiCPurc1
Striatal matrix compartmentipsiSMC-0.5
Striatal patch compartmentipsiSPC-0.5
Ventral striatumipsiCPuv-0.5
Ventrolateral striatumipsiCPuvl-0.5
Ventromedial striatumipsiCPuvm0
Lateral striatumipsiCPul2
Subthalamic nucleusipsiSTh2
Cerebral cortexipsiCEC0.5
HippocampusipsiHIPP-0.5
Retrosplenial ventral partipsiRSPv0.5
Retrosplenial granular cortex layer 3ipsiRSGL31
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex anterior part layer 1bipsiACCaL1b-0.5
Anterior cingulate cortex anterior part layer 2ipsiACCaL2-0.5
Anterior cingulate cortex anterior part layer 3ipsiACCaL3-0.5
Cingulate cortex area 1ipsiCg13
Cingulate cortex area 1 caudal partipsiCg1c2
Cingulate cortex area 1 rostral partipsiCg1r2
Cingulate cortex area 2ipsiCg2-0.5
Cingulate cortex area 2 caudal partipsiCg2c2
Cingulate cortex area 3ipsiCg32
Dorsal anterior cingulate cortex layer 3ipsiDACCL33
Dorsal anterior cingulate cortex layer 5ipsiDACCL52
Dorsal anterior cingulate cortex layer 1ipsiDACCL12
Ventral anterior cingulate cortex layer 3ipsiVACCL33
Posterior cingulate cortex dorsal partipsiPCCD2
Prelimbic cortexipsiPrL2
Prelimbic cortex layer 3ipsiPrLL3-0.5
Prelimbic cortex ventral part layer 3ipsiPrLvL33
Infralimbic cortexipsiIL1
Infralimbic cortex layer 3ipsiILL3-0.5
NeocortexipsiNEOCX2
Frontal association cortexipsiFrA2
Frontal cortex area 1ipsiFr12
Frontal cortex area 2ipsiFr23
Frontal cortex area 2 anterior partipsiFr2a2
Frontal cortex area 2 caudal partipsiFr2C1.5
Frontal cortex area 2 rostral partipsiFr2R1.5
Frontal cortex area 2 layer 3ipsiFr2L32
Frontal cortex area 2 layer 1ipsiFr2L11
Frontal cortex area 2 layer 1bipsiFr2L1b-0.5
Frontal cortex area 2 layer 2ipsiFr2L21
Frontal cortex area 2 layer 5ipsiFr2L52
Frontal cortex area 2 ventral part layer 3ipsiFr2vL32
Parietal association cortexipsiPtA2
Parietal cortex posterior areaipsiParP2
Parietal cortex posterior area caudal part of the lateral portionipsiParPcL-0.5
Parietal cortex posterior area medial portionipsimPPC1
Parietal cortex posterior area rostrocaudal extent of the medial portionipsimrcPPC1
Parietal cortex posterior area dorsal partipsiParPD-0.5
Parietal association cortex dorsomedial partipsiPtADM3
Parietal cortex area 1 dorsomedial partipsiPar1dm2
Insular cortexipsiICX3
Agranular insular cortexipsiAI1
Agranular insular cortex dorsal partipsiAID-0.5
Agranular insular cortex dorsal part layer 3ipsiAIDL3-0.5
Agranular insular cortex dorsal part superficial layersipsiAIDsL1
Agranular insular cortex rostral partipsiRAIC2
Agranular insular cortex ventral part layer 3ipsiAIVL3-0.5
Dysgranular insular cortexipsiDI1
Visceral dysgranular insular cortexipsiDIv2
Granular insular cortexipsiGI1
Prefrontal cortexipsiPFC2
Prefrontal cortex dorsomedial partipsiPFCdm2
Dorsolateral pregenual sector of the prefrontal cortexipsipgPFCdL1
Somatomotoric regionsipsiSMR-0.5
Motoric regionsipsiM3
Lateral agranular prefrontal cortexipsiAGl3
Forelimb motor cortexipsiFMCx3
Caudal forelimb motor areaipsiCFMA3
Elbow flexion motor cortexipsiEFMCx3
Rostral forelimb motor areaipsiRFMA3
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx3
Hindlimb motor cortexipsiHMCx2
Ankle dorsiflexion motor cortexipsiADFMCx3
Ankle plantar flexion motor cortexipsiAPFMCx2
Hip flexion motor cortexipsiHFMCx1
Lateral agranular prefrontal cortex layer 1ipsiAGlL13
Lateral agranular prefrontal cortex layer 3ipsiAGlL3-0.5
Lateral agranular prefrontal cortex layer 5ipsiAGlL5-0.5
Lateral agranular prefrontal cortex layer 6ipsiAGlL61
Rostral part of lateral agranular prefrontal cortexipsiAGlr1
Whiskers motor cortexipsiWMCx-0.5
Whisker motor cortex subfieldsipsiWMCxS2
Medial prefrontal cortexipsimPFC3
Medial agranular prefrontal cortexipsiAGm2
Medial agranular prefrontal cortex layer 3ipsiAGmL3-0.5
Medial agranular prefrontal cortex layer 5ipsiAGmL5-0.5
Medial agranular prefrontal cortex layer 6ipsiAGmL61
Medial agranular prefrontal cortex rostral partipsirAGm1.5
Posterior part of the medial agranular prefrontal cortexipsiPoAGm-0.5
Sensory regionsipsiSR-0.5
Primary somatosensory cortexipsiS13
Primary somatosensory cortex barrel fieldipsiS1BF2
Caudal whisker areaipsiCS1BF1
Rostral whisker areaipsiRS1BF1
Primary somatosensory cortex layer 5ipsiS1L5-0.5
Primary somatosensory cortex layer 5 aipsiS1L5a-0.5
Primary somatosensory cortex layer 6ipsiS1L61
Primary somatosensory cortex forelimb regionipsiS1FL2
Primary somatosensory cortex forelimb region rostral partipsiS1FLR2
Primary somatosensory cortex hindlimb regionipsiS1HL2
Primary somatosensory cortex trunk regionipsiS1Tr2
Primary somatosensory cortex rostral partipsiS1r0
Dorsolateral part of the primary somatosensory cortexipsiS1DL-0.5
Secondary somatosensory cortexipsiS23
Visual regionsipsiVR3
Primary visual cortexipsiV11
Primary visual cortex layer 1ipsiV1L12
Secondary visual cortex medial areaipsiV2M-0.5
Medial extrastriate cortexipsiVISM1
Lateral orbital cortexipsiLO3
Lateral orbital cortex layer 1bipsiLOLaL1b-0.5
Lateral orbital cortex layer 2ipsiLOLaL2-0.5
Lateral orbital cortex layer 3ipsiLOLaL33
Medial orbital cortexipsiMO2
Medial orbital cortex layer 3ipsiMOcxL32
Ventral orbital cortexipsiVO3
Rostral ventral orbital cortexipsiRVO-0.5
Ventral orbital cortex layer 1bipsiVOL1b-0.5
Ventral orbital cortex layer 2ipsiVOL2-0.5
Ventral orbital cortex layer 3ipsiVOL33
Ventrolateral orbital areaipsiVLO2
Ventrolateral orbital area layer 3ipsiVLOL3-0.5
Ventral lateral geniculate nucleusipsiVLG3
Ventral lateral geniculate nucleus magnocellular partipsiVLGMC0
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC2
Olfactory tubercleipsiTuO0

Input from

NameSideAbbr.WeightDetails
Central graycontraCG1
Lateral periaqueductal graycontraLPAG1
Periaqueductal gray rostrocaudal extentcontraPAGroe3
Superior colliculus lateral partcontraSCL1
Superior colliculus medial partcontramSC1
Substantia nigra compact partcontraSNC-0.5
Laterodorsal tegmental nucleuscontraLDTg3
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN1
Pedunculopontine tegmental nucleus pars compactacontraPPNC1
Cerebellar nucleicontraDCeN-0.5
Interposed cerebellar nucleicontraICN-0.5
Anterior interposed nucleuscontraAIN1
Lateral cerebellar nucleuscontraCERL2
Lateral cerebellar nucleus caudal partcontraCERLc3
Lateral cerebellar nucleus central partcontraCERLce2
Lateral cerebellar nucleus rostral partcontraCERLr2
Medial cerebellar nucleuscontraMed2
Locus coeruleuscontraLC3
Locus coeruleus posterior partcontraLCp1
Pontine sublaterodorsal nucleuscontraPsLdn3
Prepositus nucleuscontraPr3
Mesencephalic reticular formationcontraMRF3
Deep mesencephalic nucleuscontraDpMe0.5
Pontine reticular nucleuscontraPRN3
Pontine reticular nucleus oral partcontraPnO3
Pontine reticular nucleus oral part central partcontraPnOC1
Pontine reticular nucleus oral part dorsal partcontraPnOd1
Ventrolateral pontine reticular formationcontravlPRF0
Pontine reticular nucleus caudal partcontraPNC3
Parabrachial nucleus dorsal partcontraPBD3
Gigantocellular reticular nucleuscontraGi3
Lateral reticular nucleuscontraLRt-0.5
Medullary reticular nucleus dorsal partcontraMdDd2
Intertrigeminal nucleus caudal partcontraI5ca1
Intertrigeminal nucleus medial partcontraI5me1
Intertrigeminal nucleus rostral partcontraI5ro1
Juxtatrigeminal area caudal partcontraJx5ca1
Juxtatrigeminal area medial partcontraJx5me2
Juxtatrigeminal area rostral partcontraJx5ro2
Supratrigeminal nucleus caudal partcontraSUTc2
Principal sensory trigeminal nucleuscontraPr54
Principal sensory trigeminal nucleus caudal partcontraPr5ca2
Principal sensory trigeminal nucleus medial partcontraPr5me2
Principal sensory trigeminal nucleus rostral partcontraPr5ro2
Barreletts of principal trigeminal nucleus ventral part A1contraPr5vA1-0.5
Barreletts of principal trigeminal nucleus ventral part A2contraPr5vA2-0.5
Barreletts of principal trigeminal nucleus ventral part A3contraPr5vA3-0.5
Barreletts of principal trigeminal nucleus ventral part A4contraPr5vA4-0.5
Barreletts of principal trigeminal nucleus ventral part B1contraPr5vB1-0.5
Barreletts of principal trigeminal nucleus ventral part B2contraPr5vB2-0.5
Barreletts of principal trigeminal nucleus ventral part B3contraPr5vB3-0.5
Barreletts of principal trigeminal nucleus ventral part B4contraPr5vB4-0.5
Barreletts of principal trigeminal nucleus ventral part C1contraPr5vC1-0.5
Barreletts of principal trigeminal nucleus ventral part C2contraPr5vC2-0.5
Barreletts of principal trigeminal nucleus ventral part C3contraPr5vC3-0.5
Barreletts of principal trigeminal nucleus ventral part C4contraPr5vC4-0.5
Barreletts of principal trigeminal nucleus ventral part C5contraPr5vC5-0.5
Barreletts of principal trigeminal nucleus ventral part D1contraPr5vD1-0.5
Barreletts of principal trigeminal nucleus ventral part D2contraPr5vD2-0.5
Barreletts of principal trigeminal nucleus ventral part D3contraPr5vD3-0.5
Barreletts of principal trigeminal nucleus ventral part D4contraPr5vD4-0.5
Barreletts of principal trigeminal nucleus ventral part D5contraPr5vD5-0.5
Barreletts of principal trigeminal nucleus ventral part D6contraPr5vD6-0.5
Barreletts of principal trigeminal nucleus ventral part E1contraPr5vE1-0.5
Barreletts of principal trigeminal nucleus ventral part E2contraPr5vE2-0.5
Barreletts of principal trigeminal nucleus ventral part E3contraPr5vE3-0.5
Barreletts of principal trigeminal nucleus ventral part E4contraPr5vE4-0.5
Barreletts of principal trigeminal nucleus ventral part E5contraPr5vE5-0.5
Barreletts of principal trigeminal nucleus ventral part E6contraPr5vE6-0.5
Barreletts of principal trigeminal nucleus ventral part E7contraPr5vE7-0.5
Spinal trigeminal nucleus caudal partcontraSp5C1
Spinal trigeminal nucleus interpolar partcontraSp5I3
Spinal trigeminal nucleus oral partcontraSp5O1
Trigemino angular nucleus caudal partcontraTac1
Spinal vestibular nucleuscontraSpVe1
Medial vestibular nucleuscontraMVe-0.5
Medial vestibular nucleus caudal partcontraMVeP3
Medial vestibular nucleus ventromedial partcontraMVevm3
Dorsal raphe nucleuscontraDR3
Median raphe nucleuscontraMnR1
Cuneate nucleuscontraCu3
GracilecontraGra3
Nucleus of BischoffcontraNBi0.5
Lateral zonecontraLHA-0.5
Anterior hypothalamic areacontraAHA-0.5
Dorsal hypothalamic areacontraDA-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus central partcontraVMHC0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Perifornical nucleuscontraPeF-0.5
Zona incertacontraZI1
Globus palliduscontraGP0
Lateral globus palliduscontraLGP1
Parasubthalamic nucleuscontraPSTh2
Limbic regionscontraLR3
Anterior cingulate cortexcontraACC-0.5
Cingulate cortex area 3 layer 6contraCg3L6-0.5
Frontal association cortexcontraFrA2
Frontal cortex area 2contraFr21
Agranular insular cortex rostral partcontraRAIC1
Lateral agranular prefrontal cortexcontraAGl1
Medial agranular prefrontal cortex rostral partcontrarAGm1
Interpeduncular nucleuscontraIP1
Spinal cordcontraMES2
Cervical segment 1contraCS14
Internal basilar nucleus C1contraIBC1-0.5
Lateral spinal nucleus C1contraLSpC12
Nucleus of dorsolateral funiculus C1contraNDLFC11.5
Spinal cord layers C1contraSCLC12
Area X C1contraSCL10C11.5
Spinal cord layer 5 C1contraSCL5C12.5
Spinal cord layer 6 C1contraSCL6C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 1 C1contraSCL1C11.5
Intermediate zone C1contraizVHC1-0.5
Spinal cord layer 7 C1contraSCL7C12.5
Spinal cord layer 8 C1contraSCL8C1-0.5
Spinal cord layer 9 C1contraSCL9C1-0.5
Cervical segment 2contraCS24
Internal basilar nucleus C2contraIBC2-0.5
Lateral spinal nucleus C2contraLSpC22
Nucleus of dorsolateral funiculus C2contraNDLFC21.5
Spinal cord layers C2contraSCLC22
Area X C2contraSCL10C21.5
Spinal cord layer 5 C2contraSCL5C22.5
Spinal cord layer 6 C2contraSCL6C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 1 C2contraSCL1C21.5
Intermediate zone C2contraizVHC2-0.5
Spinal cord layer 7 C2contraSCL7C22.5
Spinal cord layer 8 C2contraSCL8C2-0.5
Spinal cord layer 9 C2contraSCL9C2-0.5
Cervical segment 3contraCS33
Lateral spinal nucleus C3contraLSpC32
Nucleus of dorsolateral funiculus C3contraNDLFC31.5
Spinal cord layers C3contraSCLC32
Area X C3contraSCL10C31.5
Spinal cord layer 5 C3contraSCL5C32.5
Spinal cord layer 6 C3contraSCL6C3-0.5
Spinal cord layer 4 C3contraSCL4C3-0.5
Spinal cord layer 1 C3contraSCL1C31.5
Intermediate zone C3contraizVHC3-0.5
Spinal cord layer 7 C3contraSCL7C32.5
Spinal cord layer 8 C3contraSCL8C3-0.5
Spinal cord layer 9 C3contraSCL9C3-0.5
Cervical segment 4contraCS42
Lateral spinal nucleus C4contraLSpC42
Nucleus of dorsolateral funiculus C4contraNDLFC41.5
Spinal cord layers C4contraSCLC42
Area X C4contraSCL10C41.5
Spinal cord layer 5 C4contraSCL5C42.5
Spinal cord layer 6 C4contraSCL6C4-0.5
Spinal cord layer 4 C4contraSCL4C4-0.5
Spinal cord layer 1 C4contraSCL1C41.5
Intermediate zone C4contraizVHC4-0.5
Spinal cord layer 7 C4contraSCL7C42.5
Spinal cord layer 8 C4contraSCL8C4-0.5
Spinal cord layer 9 C4contraSCL9C4-0.5
Cervical segment 5contraCS52
Lateral spinal nucleus C5contraLSpC52
Nucleus of dorsolateral funiculus C5contraNDLFC51.5
Spinal cord layers C5contraSCLC52
Area X C5contraSCL10C51.5
Spinal cord layer 5 C5contraSCL5C52.5
Spinal cord layer 1 C5contraSCL1C51.5
Intermediate zone C5contraizVHC5-0.5
Spinal cord layer 7 C5contraSCL7C52.5
Cervical segment 6contraCS61
Lateral spinal nucleus C6contraLSpC62
Nucleus of dorsolateral funiculus C6contraNDLFC61.5
Spinal cord layers C6contraSCLC62
Area X C6contraSCL10C63
Spinal cord layer 5 C6contraSCL5C63
Spinal cord layer 3 C6contraSCL3C63
Spinal cord layer 4 C6contraSCL4C63
Spinal cord layer 1 C6contraSCL1C61.5
Spinal cord layer 2 C6contraSCL2C6-0.5
Intermediate zone C6contraizVHC6-0.5
Spinal cord layer 7 C6contraSCL7C62.5
Spinal cord layer 8 C6contraSCL8C63
Cervical segment 7contraCS72
Lateral spinal nucleus C7contraLSpC72
Nucleus of dorsolateral funiculus C7contraNDLFC71.5
Spinal cord layers C7contraSCLC72
Area X C7contraSCL10C73
Spinal cord layer 5 C7contraSCL5C73
Spinal cord layer 6 C7contraSCL6C72
Spinal cord layer 3 C7contraSCL3C73
Spinal cord layer 4 C7contraSCL4C73
Spinal cord layer 1 C7contraSCL1C71.5
Spinal cord layer 2 C7contraSCL2C7-0.5
Intermediate zone C7contraizVHC7-0.5
Spinal cord layer 7 C7contraSCL7C72.5
Spinal cord layer 8 C7contraSCL8C73
Cervical segment 8contraCS82
Lateral spinal nucleus C8contraLSpC82
Nucleus of dorsolateral funiculus C8contraNDLFC81.5
Spinal cord layers C8contraSCLC82
Area X C8contraSCL10C83
Spinal cord layer 5 C8contraSCL5C83
Spinal cord layer 3 C8contraSCL3C83
Spinal cord layer 4 C8contraSCL4C83
Spinal cord layer 1 C8contraSCL1C81.5
Spinal cord layer 2 C8contraSCL2C8-0.5
Intermediate zone C8contraizVHC8-0.5
Spinal cord layer 7 C8contraSCL7C82.5
Spinal cord layer 8 C8contraSCL8C83
Thoracal segment 1contraT11
Lateral spinal nucleus T1contraLSpT12
Nucleus of dorsolateral funiculus T1contraNDLFT11.5
Area X T1contraSCL10T11.5
Spinal cord layer 5 T1contraSCL5T12.5
Spinal cord layer 3 T1contraSCL3T13
Spinal cord layer 4 T1contraSCL4T13
Spinal cord layer 1 T1contraSCL1T11.5
Intermediate zone T1contraizVHT1-0.5
Spinal cord layer 7 T1contraSCL7T12.5
Thoracal segment 2contraT21
Lateral spinal nucleus T2contraLSpT22
Nucleus of dorsolateral funiculus T2contraNDLFT21.5
Area X T2contraSCL10T21.5
Spinal cord layer 5 T2contraSCL5T22.5
Spinal cord layer 1 T2contraSCL1T21.5
Intermediate zone T2contraizVHT2-0.5
Spinal cord layer 7 T2contraSCL7T22.5
Thoracal segment 3contraT31
Lateral spinal nucleus T3contraLSpT32
Nucleus of dorsolateral funiculus T3contraNDLFT31.5
Area X T3contraSCL10T31.5
Spinal cord layer 5 T3contraSCL5T32.5
Spinal cord layer 1 T3contraSCL1T31.5
Intermediate zone T3contraizVHT3-0.5
Spinal cord layer 7 T3contraSCL7T32.5
Thoracal segment 4contraT40.5
Lateral spinal nucleus T4contraLSpT42
Nucleus of dorsolateral funiculus T4contraNDLFT41.5
Area X T4contraSCL10T41.5
Spinal cord layer 5 T4contraSCL5T42.5
Spinal cord layer 1 T4contraSCL1T41.5
Intermediate zone T4contraizVHT4-0.5
Spinal cord layer 7 T4contraSCL7T42.5
Thoracal segment 5contraT50.5
Lateral spinal nucleus T5contraLSpT52
Nucleus of dorsolateral funiculus T5contraNDLFT51.5
Area X T5contraSCL10T51.5
Spinal cord layer 5 T5contraSCL5T52.5
Spinal cord layer 1 T5contraSCL1T51.5
Intermediate zone T5contraizVHT5-0.5
Spinal cord layer 7 T5contraSCL7T52.5
Thoracal segment 6contraT60.5
Lateral spinal nucleus T6contraLSpT62
Nucleus of dorsolateral funiculus T6contraNDLFT61.5
Area X T6contraSCL10T61.5
Spinal cord layer 5 T6contraSCL5T62.5
Spinal cord layer 1 T6contraSCL1T61.5
Intermediate zone T6contraizVHT6-0.5
Spinal cord layer 7 T6contraSCL7T62.5
Thoracal segment 7contraT71
Lateral spinal nucleus T7contraLSpT72
Nucleus of dorsolateral funiculus T7contraNDLFT71.5
Area X T7contraSCL10T71.5
Spinal cord layer 5 T7contraSCL5T72.5
Spinal cord layer 1 T7contraSCL1T71.5
Intermediate zone T7contraizVHT7-0.5
Spinal cord layer 7 T7contraSCL7T72.5
Thoracal segment 8contraT80.5
Lateral spinal nucleus T8contraLSpT82
Nucleus of dorsolateral funiculus T8contraNDLFT81.5
Area X T8contraSCL10T81.5
Spinal cord layer 5 T8contraSCL5T82.5
Spinal cord layer 1 T8contraSCL1T81.5
Intermediate zone T8contraizVHT8-0.5
Spinal cord layer 7 T8contraSCL7T82.5
Thoracal segment 9contraT92
Lateral spinal nucleus T9contraLSpT92
Nucleus of dorsolateral funiculus T9contraNDLFT91.5
Area X T9contraSCL10T91.5
Spinal cord layer 5 T9contraSCL5T92.5
Spinal cord layer 1 T9contraSCL1T91.5
Intermediate zone T9contraizVHT9-0.5
Spinal cord layer 7 T9contraSCL7T92.5
Thoracal segment 10contraT102
Lateral spinal nucleus T10contraLSpT102
Nucleus of dorsolateral funiculus T10contraNDLFT101.5
Area X T10contraSCL10T101.5
Spinal cord layer 5 T10contraSCL5T102.5
Spinal cord layer 1 T10contraSCL1T101.5
Intermediate zone T10contraizVHT10-0.5
Spinal cord layer 7 T10contraSCL7T102.5
Thoracal segment 11contraT112
Lateral spinal nucleus T11contraLSpT112
Nucleus of dorsolateral funiculus T11contraNDLFT111.5
Area X T11contraSCL10T111.5
Spinal cord layer 5 T11contraSCL5T112.5
Spinal cord layer 1 T11contraSCL1T111.5
Intermediate zone T11contraizVHT11-0.5
Spinal cord layer 7 T11contraSCL7T112.5
Thoracal segment 12contraT121
Lateral spinal nucleus T12contraLSpT122
Nucleus of dorsolateral funiculus T12contraNDLFT121.5
Area X T12contraSCL10T121.5
Spinal cord layer 5 T12contraSCL5T122.5
Spinal cord layer 1 T12contraSCL1T121.5
Intermediate zone T12contraizVHT12-0.5
Spinal cord layer 7 T12contraSCL7T122.5
Thoracal segment 13contraT131
Lateral spinal nucleus T13contraLSpT132
Nucleus of dorsolateral funiculus T13contraNDLFT131.5
Area X T13contraSCL10T131.5
Spinal cord layer 5 T13contraSCL5T132.5
Spinal cord layer 1 T13contraSCL1T131.5
Intermediate zone T13contraizVHT13-0.5
Spinal cord layer 7 T13contraSCL7T132.5
Thoracal segments layer 4contraTSegL43
Thoracal segments layer 5contraTSegL53
Thoracal segments layer 7contraTSegL73
Thoracal segments layer 10contraTSegL103
Lumbar segment 1contraL13
Lateral spinal nucleus L1contraLSpL12
Nucleus of dorsolateral funiculus L1contraNDLFL11.5
Spinal cord layers L1contraSCLL12
Area X L1contraSCL10L11.5
Spinal cord layer 5 L1contraSCL5L12.5
Spinal cord layer 6 L1contraSCL6L1-0.5
Spinal cord layer 1 L1contraSCL1L11.5
Spinal cord layer 7 L1contraSCL7L12.5
Lumbar segment 2contraL23
Lateral spinal nucleus L2contraLSpL22
Nucleus of dorsolateral funiculus L2contraNDLFL21.5
Spinal cord layers L2contraSCLL22
Area X L2contraSCL10L21.5
Spinal cord layer 5 L2contraSCL5L22.5
Spinal cord layer 6 L2contraSCL6L2-0.5
Spinal cord layer 1 L2contraSCL1L21.5
Spinal cord layer 7 L2contraSCL7L22.5
Lumbar segment 3contraL33
Lateral spinal nucleus L3contraLSpL32
Nucleus of dorsolateral funiculus L3contraNDLFL31.5
Spinal cord layers L3contraSCLL32
Area X L3contraSCL10L33
Spinal cord layer 5 L3contraSCL5L33
Spinal cord layer 6 L3contraSCL6L3-0.5
Spinal cord layer 3 L3contraSCL3L33
Spinal cord layer 4 L3contraSCL4L33
Spinal cord layer 1 L3contraSCL1L31.5
Intermediate zone L3contraizVHL3-0.5
Spinal cord layer 7 L3contraSCL7L32.5
Spinal cord layer 8 L3contraSCL8L33
Lumbar segment 4contraL42
Lateral spinal nucleus L4contraLSpL42
Nucleus of dorsolateral funiculus L4contraNDLFL41.5
Spinal cord layers L4contraSCLL42
Area X L4contraSCL10L43
Spinal cord layer 5 L4contraSCL5L43
Spinal cord layer 6 L4contraSCL6L4-0.5
Spinal cord layer 3 L4contraSCL3L43
Spinal cord layer 4 L4contraSCL4L43
Spinal cord layer 1 L4contraSCL1L41.5
Intermediate zone L4contraizVHL4-0.5
Spinal cord layer 7 L4contraSCL7L42.5
Spinal cord layer 8 L4contraSCL8L43
Lumbar segment 5contraL52
Lateral spinal nucleus L5contraLSpL52
Nucleus of dorsolateral funiculus L5contraNDLFL51.5
Spinal cord layers L5contraSCLL52
Area X L5contraSCL10L53
Spinal cord layer 5 L5contraSCL5L53
Spinal cord layer 6 L5contraSCL6L5-0.5
Spinal cord layer 3 L5contraSCL3L53
Spinal cord layer 4 L5contraSCL4L53
Spinal cord layer 1 L5contraSCL1L51.5
Intermediate zone L5contraizVHL5-0.5
Spinal cord layer 7 L5contraSCL7L52.5
Spinal cord layer 8 L5contraSCL8L53
Lumbar segment 6contraL63
Lateral spinal nucleus L6contraLSpL62
Nucleus of dorsolateral funiculus L6contraNDLFL61.5
Spinal cord layers L6contraSCLL62
Area X L6contraSCL10L61.5
Spinal cord layer 5 L6contraSCL5L62.5
Spinal cord layer 6 L6contraSCL6L6-0.5
Spinal cord layer 1 L6contraSCL1L61.5
Intermediate zone L6contraizVHL6-0.5
Spinal cord layer 7 L6contraSCL7L62.5
Spinal cord layer 8 L6contraSCL8L6-0.5
Lumbar segments layer 4contraLSegL43
Lumbar segments layer 5contraLSegL53
Lumbar segments layer 7contraLSegL73
Lumbar segments layer 10contraLSegL103
Sacral segment 1contraSa13
Lateral spinal nucleus S1contraLSpS12
Area X S1contraSCL10S13
Spinal cord layer 5 S1contraSCL5S12.5
Spinal cord layer 1 S1contraSCL1S11.5
Spinal cord layer 7 S1contraSCL7S13
Sacral segment 2contraSa23
Lateral spinal nucleus S2contraLSpS22
Area X S2contraSCL10S23
Spinal cord layer 5 S2contraSCL5S22.5
Spinal cord layer 1 S2contraSCL1S21.5
Spinal cord layer 7 S2contraSCL7S23
Sacral segment 3contraSa31
Lateral spinal nucleus S3contraLSpS32
Area X S3contraSCL10S33
Spinal cord layer 5 S3contraSCL5S32.5
Spinal cord layer 1 S3contraSCL1S31.5
Spinal cord layer 7 S3contraSCL7S33
Sacral segment 4contraSa41
Lateral spinal nucleus S4contraLSpS42
Area X S4contraSCL10S41.5
Spinal cord layer 5 S4contraSCL5S42.5
Spinal cord layer 1 S4contraSCL1S41.5
Spinal cord layer 7 S4contraSCL7S42.5
Sacral segments layer 4contraSSegL43
Sacral segments layer 5contraSSegL53
Sacral segments layer 7contraSSegL73
Sacral segments layer 10contraSSegL103
Coccygeal segment 1contraCo11
Lateral spinal nucleus Co1contraLSpCo12
Coccygeal segment 2contraCo21
Lateral spinal nucleus Co2contraLSpCo22
Coccygeal segment 3contraCo31
Lateral spinal nucleus Co3contraLSpCo32
Central grayipsiCG3
Paralemniscal nucleusipsiPL0
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF1
Nucleus of DarkschewitschipsiDk4
Periaqueductal grayipsiPAG2
Aqueductal part of periaqueductal grayipsiAPAG1
Dorsal periaqueductal grayipsiDPAG1
Dorsolateral periaqueductal grayipsiDLPAG3
Dorsolateral periaqueductal gray caudal partipsiPAGdlc2
Dorsolateral periaqueductal gray rostral partipsiPAGdlr3
Dorsomedial periaqueductal grayipsiDMPAG2
Lateral periaqueductal grayipsiLPAG2
Periaqueductal gray rostral dorsal partipsiPAGdr3
Periaqueductal gray caudal dorsolateral partipsiPAGLDC2
Periaqueductal gray rostrolateral partipsiPAGRL2
Periaqueductal gray rostrocaudal extentipsiPAGroe3
Ventral periaqueductal grayipsiVPAG3
Ventrolateral periaqueductal grayipsiVLPAG2
Ventrolateral periaqueductal gray caudal partipsiPAGvlc2
Ventrolateral periaqueductal gray rostral partipsiPAGvlr1
Periventricular gray matteripsiPVG0
Inferior colliculusipsiICOL2
Superior colliculusipsiSC4
Superior colliculus lateral partipsiSCL2
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Superior colliculus intermediate layersipsiSCi3
Anterior part of superior colliculus intermediate layersipsiASCi2
Anterior two-thirds of superior colliculus intermediate layersipsiASCitt-0.5
Superior colliculus deep layersipsiSCd3
Superior colliculus medial partipsimSC2
Tegmental areaipsiTGA2
Central tegmental fieldipsiTGAC2
Peduncularpontine nucleusipsiPPN-0.5
Subpeduncular tegmental nucleusipsiSPTg3
Substantia nigra A9ipsiSN3
Substantia nigra compact partipsiSNC3
Substantia nigra compact part ventral tier dopaminergic neuron populationipsiSNCVdopa0.5
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part caudal tieripsiSNRca0
Substantia nigra reticular part medial tieripsiSNRm3
Substantia nigra reticular part rostral tieripsiSNRro2
Substantia nigra reticular part ventrolateral tieripsiSNRVL1
Ventral tegmental area A10ipsiVTA1
Parabrachial pigmented nucleusipsiPBP0
Caudal linear nucleus of the rapheipsiCLi2
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg3
Dorsal tegmental nucleus lateral partipsiDLTN2
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus pars compactaipsiPPNC2
Edinger Westphal nucleusipsiEW1
Interstitial nucleus of CajalipsiInC3
Interposed cerebellar nucleiipsiICN2
Lateral interposed cerebellar nucleusipsiICNL2
Lateral cerebellar nucleusipsiCERL2
Lateral cerebellar nucleus caudal partipsiCERLc1
Lateral cerebellar nucleus central partipsiCERLce0.5
Lateral cerebellar nucleus rostral partipsiCERLr0.5
A5 noradrenaline cellsipsiA50
Barringtons nucleusipsiBar1.5
Locus coeruleusipsiLC3
Locus coeruleus posterior partipsiLCp2
Nucleus incertusipsiNI0
Nucleus incertus pars compactaipsiNIc-0.5
Pontine sublaterodorsal nucleusipsiPsLdn3
Dorsomedial tegmental areaipsiDMTg2
Prepositus nucleusipsiPr2
Reticular systemipsiRF3
Intermediate reticular nucleusipsiIRt0
Medial reticular formationipsiRFm3
Mesencephalic reticular formationipsiMRF3
Deep mesencephalic nucleusipsiDpMe4
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus oral part central partipsiPnOC3
Pontine reticular nucleus oral part dorsal partipsiPnOd3
Pontine reticular nucleus ventral partipsiPnV0
Pontomesencephalic reticular formationipsiPMRF1
Ventrolateral pontine reticular formationipsivlPRF2
Taste related region of the pontine reticular nucleusipsiPRNtr-0.5
Pontine reticular nucleus caudal partipsiPNC2
Cuneiforme nucleusipsiCnF3
Parabrachial nucleusipsiPB1
Lateral parabrachial nucleusipsiLPB-0.5
Lateral parabrachial nucleus internal partipsiLPBI1
Parabrachial nucleus medialipsiPBnMe3
Parabrachial nucleus ventral partipsiPBV2
Parabrachial nucleus ventrolateral partipsiPBveLa3
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA1
Lateral reticular nucleusipsiLRt-0.5
Lateral reticular nucleus central partipsiLRtC1
Medullary reticular nucleusipsiMdD0
Subnucleus reticularis dorsalisipsiSRD1
Medullary reticular nucleus dorsal partipsiMdDd1
Medullary reticular nucleus ventral partipsiMdV0
Parvicellular reticular nucleusipsiPCRt3
Subcoeruleus nucleusipsiSubC1
Intertrigeminal nucleus caudal partipsiI5ca0
Intertrigeminal nucleus medial partipsiI5me1
Intertrigeminal nucleus rostral partipsiI5ro1
Juxtatrigeminal area caudal partipsiJx5ca1
Juxtatrigeminal area medial partipsiJx5me1
Juxtatrigeminal area rostral partipsiJx5ro1
Supratrigeminal nucleus caudal partipsiSUTc0
Principal sensory trigeminal nucleusipsiPr52
Principal sensory trigeminal nucleus caudal partipsiPr5ca1
Principal sensory trigeminal nucleus medial partipsiPr5me1
Principal sensory trigeminal nucleus rostral partipsiPr5ro0
Spinal trigeminal nucleusipsiSp5nc1
Spinal trigeminal nucleus caudal partipsiSp5C0.5
Spinal trigeminal nucleus caudal part layer 3ipsiSp5CaL32
Spinal trigeminal nucleus caudal part layer 1ipsiSp5CaL13
Spinal trigeminal nucleus caudal part layer 2ipsiSp5CaL21
Spinal trigeminal nucleus interpolar partipsiSp5I1.5
Spinal trigeminal nucleus oral partipsiSp5O0.5
Anterior part of spinal trigeminal nucleus oral partipsiSp5OA2
Trigeminal subnucleus caudalisipsi5SSC1
Trigemino angular nucleus caudal partipsiTac1
Spinal vestibular nucleusipsiSpVe2
Vestibular nucleiipsiVnc2
Superior vestibular nucleusipsiSuVe2
Medial vestibular nucleusipsiMVe3
Medial vestibular nucleus caudal partipsiMVeP1
Medial vestibular nucleus intermediate partipsiMVei1
Medial vestibular nucleus ventromedial partipsiMVevm3
Lateral vestibular nucleusipsiLVe2
Inferior vestibular nucleusipsiIVN3
Nucleus of the solitary tractipsiSol-0.5
Raphe nucleiipsiRAN0.5
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC2
Dorsal raphe nucleus dorsal partipsiDRD3
Dorsal raphe nucleus middle part shell regionipsiDRsh-0.5
Dorsal raphe nucleus rostral partipsiDRr2
Dorsal raphe nucleus ventral partipsiDRV2
Dorsal raphe nucleus ventrolateral partipsiDRVL4
Rostral linear nucleus of the rapheipsiRLi2
Median raphe nucleusipsiMnR3
Paramedian raphe nucleusipsiPMnR2
Pontine raphe nucleusipsiPnR1.5
Raphe interpositus nucleusipsiRIP2
Raphe magnus nucleusipsiRMg1.5
Raphe obscurus nucleusipsiROb0
Raphe pallidus nucleusipsiRPa0
Rostral ventrolateral medullaipsiRVLM0
Dorsal column nucleiipsiDCN2
Cuneate nucleusipsiCu1.5
GracileipsiGra1.5
Gracile nucleus principal partipsiGr0
Nucleus of BischoffipsiNBi0.5
Dorsal paragigantocellular nucleusipsiDPGi2
Lateral paragigantocellular nucleusipsiLPGi0
Nucleus of the diagonal band of Broca dorsal partipsiVDBD2.5
Substantia innominataipsiSI1
Substantia innominata dorsal partipsiSID2.5
Intermediate hypothalamic cell groupsipsiIHCG0
Lateral preoptic areaipsiLPO2
HypothalamusipsiHYPO1
Dorsomedial hypothalamic nucleusipsiDMHy0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar0
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR0
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp0
Lateral zoneipsiLHA2
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm0
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa0
Lateral hypothalamic area perifornical partipsiPFx2
Anterior hypothalamic areaipsiAHA1
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleus caudal partipsiPHCa2
Posterior hypothalamic nucleus rostral partipsiPHRo3
Ventromedial hypothalamic nucleusipsiVMH1
Ventromedial hypothalamic nucleus central partipsiVMHC-0.5
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Paraventricular hypothalamic nucleusipsiPa2
Premammillary nucleus dorsal partipsiPMD0.5
Supramammillar nucleus lateral part lateral subpartipsiSuMLL1
Supramammillar nucleus lateral part medial subpartipsiSuMLM1
Supramammillar nucleus medial partipsiSuMM2
A8 dopamine cells retrorubral groupipsiRRF2
Perifornical nucleusipsiPeF2
Dorsal thalamusipsiDOR1
Parafascicular thalamic nucleus lateral partipsiPFL1
Posterior thalamic nuclear groupipsiPo-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Ventral posteromedial thalamic nucleusipsiVPM-0.5
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus anteroventral partipsiRtAV1
Reticular thalamic nucleus medial partipsiRtm1
Reticular thalamic nucleus rostral partipsiRtr3
Caudal part of reticular thalamic nucleus rostral partipsiRtrC1
Dorsolateral part of reticular thalamic nucleus rostral partipsiRtrDL2
Zona incertaipsiZI2
Zona incerta caudal partipsiZIC2
Zona incerta dorsal partipsiZID3
Dorsolateral aspect of rostral extent of zona incertaipsiZIRdL2.5
Zona incerta ventral partipsiZIV2
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT3
Ventral part of the caudal half of the anterior pretectal nucleusipsiAPTcaV3
Internal capsuleipsiic-0.5
ClaustrumipsiCl1
Anterior part of the claustrumipsiACl0.5
Globus pallidusipsiGP2
Lateral globus pallidusipsiLGP2
Ventral pallidumipsiVP2.5
Dorsal striatumipsiCPud2
Ventral striatumipsiCPuv1
Retrosplenial cortexipsiRSCx1
Retrosplenial agranular cortexipsiRSA1
Midrostrocaudal part of the retrosplenial dysgranular cortexipsiRSdysmrc-0.5
Limbic regionsipsiLR3
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC3
Cingulate cortex area 3 layer 6ipsiCg3L6-0.5
Dorsal cingulate cortexipsiDCC1
Posterior cingulate cortexipsiPCC2
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL0
Frontal association cortexipsiFrA3
Frontal association cortex layer 5ipsiFrALL53
Frontal cortex area 2ipsiFr22.5
Parietal cortex posterior areaipsiParP1
Parietal cortex posterior area lateral portionipsiParPL1
Parietal cortex posterior area medial portionipsimPPC1
Parietal cortex area 1ipsiPar1-0.5
Insular cortexipsiICX3
Agranular insular cortex rostral partipsiRAIC2
Motoric regionsipsiM-0.5
Lateral agranular prefrontal cortexipsiAGl2.5
Caudal forelimb motor areaipsiCFMA2
Rostral forelimb motor areaipsiRFMA2
Rostral part of lateral agranular prefrontal cortexipsiAGlr1
Orofacial motor cortexipsiOFCx1
Whisker motor cortex subfieldsipsiWMCxS2
Medial prefrontal cortexipsimPFC-0.5
Medial agranular prefrontal cortexipsiAGm3
Medial agranular prefrontal cortex caudal partipsicAGm1
Medial agranular prefrontal cortex rostral partipsirAGm3
Posterior part of the medial agranular prefrontal cortexipsiPoAGm-0.5
Primary somatosensory cortexipsiS12
Primary somatosensory cortex barrel fieldipsiS1BF-0.5
Posteromedial barrel subfield B4 layer 6 lower partipsiPMBSFB4L6L-0.5
Primary somatosensory cortex barrel field layer 5ipsiS1BF53
Primary somatosensory cortex face regionipsiS1FR1
Primary somatosensory cortex forelimb regionipsiS1FL-0.5
Primary somatosensory cortex hindlimb regionipsiS1HL-0.5
Primary somatosensory cortex rostral partipsiS1r0
Primary visual cortexipsiV1-0.5
Medial extrastriate cortexipsiVISM-0.5
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO0
Ventral lateral geniculate nucleus magnocellular partipsiVLGMC0
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC2
Interpeduncular nucleusipsiIP3
Spinal cordipsiMES2
Cervical segment 1ipsiCS1-0.5
Ventral root C1ipsivrC1-2
Lateral spinal nucleus C1ipsiLSpC11
Nucleus of dorsolateral funiculus C1ipsiNDLFC11
Spinal cord layers C1ipsiSCLC12
Area X C1ipsiSCL10C11
Spinal cord layer 5 C1ipsiSCL5C12
Spinal cord layer 4 C1ipsiSCL4C12
Spinal cord layer 1 C1ipsiSCL1C11
Spinal cord layer 7 C1ipsiSCL7C12
Cervical segment 2ipsiCS2-0.5
Ventral root C2ipsivrC2-2
Lateral spinal nucleus C2ipsiLSpC21
Nucleus of dorsolateral funiculus C2ipsiNDLFC21
Spinal cord layers C2ipsiSCLC22
Area X C2ipsiSCL10C21
Spinal cord layer 5 C2ipsiSCL5C22
Spinal cord layer 4 C2ipsiSCL4C22
Spinal cord layer 1 C2ipsiSCL1C21
Spinal cord layer 7 C2ipsiSCL7C22
Cervical segment 3ipsiCS3-0.5
Ventral root C3ipsivrC3-2
Lateral spinal nucleus C3ipsiLSpC31
Nucleus of dorsolateral funiculus C3ipsiNDLFC31
Spinal cord layers C3ipsiSCLC32
Area X C3ipsiSCL10C31
Spinal cord layer 5 C3ipsiSCL5C32
Spinal cord layer 4 C3ipsiSCL4C32
Spinal cord layer 1 C3ipsiSCL1C31
Spinal cord layer 7 C3ipsiSCL7C32
Cervical segment 4ipsiCS4-0.5
Ventral root C4ipsivrC4-2
Lateral spinal nucleus C4ipsiLSpC41
Nucleus of dorsolateral funiculus C4ipsiNDLFC41
Spinal cord layers C4ipsiSCLC42
Area X C4ipsiSCL10C41
Spinal cord layer 5 C4ipsiSCL5C42
Spinal cord layer 1 C4ipsiSCL1C41
Spinal cord layer 7 C4ipsiSCL7C42
Cervical segment 5ipsiCS5-0.5
Ventral root C5ipsivrC5-2
Lateral spinal nucleus C5ipsiLSpC51
Nucleus of dorsolateral funiculus C5ipsiNDLFC51
Spinal cord layers C5ipsiSCLC52
Area X C5ipsiSCL10C52
Spinal cord layer 5 C5ipsiSCL5C52
Spinal cord layer 4 C5ipsiSCL4C52
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 7 C5ipsiSCL7C52
Cervical segment 6ipsiCS6-0.5
Ventral root C6ipsivrC6-2
Lateral spinal nucleus C6ipsiLSpC61
Nucleus of dorsolateral funiculus C6ipsiNDLFC61
Spinal cord layers C6ipsiSCLC62
Area X C6ipsiSCL10C62
Spinal cord layer 5 C6ipsiSCL5C62
Spinal cord layer 3 C6ipsiSCL3C61
Spinal cord layer 4 C6ipsiSCL4C62
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C6-0.5
Spinal cord layer 7 C6ipsiSCL7C62
Spinal cord layer 8 C6ipsiSCL8C61
Cervical segment 7ipsiCS7-0.5
Ventral root C7ipsivrC7-2
Lateral spinal nucleus C7ipsiLSpC71
Nucleus of dorsolateral funiculus C7ipsiNDLFC71
Spinal cord layers C7ipsiSCLC72
Area X C7ipsiSCL10C71
Spinal cord layer 5 C7ipsiSCL5C72
Spinal cord layer 6 C7ipsiSCL6C72
Spinal cord layer 3 C7ipsiSCL3C71
Spinal cord layer 4 C7ipsiSCL4C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C7-0.5
Spinal cord layer 7 C7ipsiSCL7C72
Spinal cord layer 8 C7ipsiSCL8C71
Cervical segment 8ipsiCS8-0.5
Ventral root C8ipsivrC8-2
Lateral spinal nucleus C8ipsiLSpC81
Nucleus of dorsolateral funiculus C8ipsiNDLFC81
Spinal cord layers C8ipsiSCLC82
Area X C8ipsiSCL10C81
Spinal cord layer 5 C8ipsiSCL5C82
Spinal cord layer 3 C8ipsiSCL3C81
Spinal cord layer 4 C8ipsiSCL4C81
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 2 C8ipsiSCL2C8-0.5
Spinal cord layer 7 C8ipsiSCL7C82
Spinal cord layer 8 C8ipsiSCL8C81
Thoracal segment 1ipsiT1-0.5
Lateral spinal nucleus T1ipsiLSpT11
Nucleus of dorsolateral funiculus T1ipsiNDLFT11
Area X T1ipsiSCL10T11
Spinal cord layer 5 T1ipsiSCL5T12
Spinal cord layer 3 T1ipsiSCL3T11
Spinal cord layer 4 T1ipsiSCL4T11
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 7 T1ipsiSCL7T12
Thoracal segment 2ipsiT2-0.5
Lateral spinal nucleus T2ipsiLSpT21
Nucleus of dorsolateral funiculus T2ipsiNDLFT21
Area X T2ipsiSCL10T21
Spinal cord layer 5 T2ipsiSCL5T22
Spinal cord layer 1 T2ipsiSCL1T21
Spinal cord layer 7 T2ipsiSCL7T22
Thoracal segment 3ipsiT3-0.5
Lateral spinal nucleus T3ipsiLSpT31
Nucleus of dorsolateral funiculus T3ipsiNDLFT31
Area X T3ipsiSCL10T31
Spinal cord layer 5 T3ipsiSCL5T32
Spinal cord layer 1 T3ipsiSCL1T31
Spinal cord layer 7 T3ipsiSCL7T32
Thoracal segment 4ipsiT4-0.5
Lateral spinal nucleus T4ipsiLSpT41
Nucleus of dorsolateral funiculus T4ipsiNDLFT41
Area X T4ipsiSCL10T41
Spinal cord layer 5 T4ipsiSCL5T42
Spinal cord layer 1 T4ipsiSCL1T41
Spinal cord layer 7 T4ipsiSCL7T42
Thoracal segment 5ipsiT5-0.5
Lateral spinal nucleus T5ipsiLSpT51
Nucleus of dorsolateral funiculus T5ipsiNDLFT51
Area X T5ipsiSCL10T51
Spinal cord layer 5 T5ipsiSCL5T52
Spinal cord layer 1 T5ipsiSCL1T51
Spinal cord layer 7 T5ipsiSCL7T52
Thoracal segment 6ipsiT61
Lateral spinal nucleus T6ipsiLSpT61
Nucleus of dorsolateral funiculus T6ipsiNDLFT61
Area X T6ipsiSCL10T61
Spinal cord layer 5 T6ipsiSCL5T62
Spinal cord layer 1 T6ipsiSCL1T61
Spinal cord layer 7 T6ipsiSCL7T62
Thoracal segment 7ipsiT71
Lateral spinal nucleus T7ipsiLSpT71
Nucleus of dorsolateral funiculus T7ipsiNDLFT71
Area X T7ipsiSCL10T71
Spinal cord layer 5 T7ipsiSCL5T72
Spinal cord layer 1 T7ipsiSCL1T71
Spinal cord layer 7 T7ipsiSCL7T72
Thoracal segment 8ipsiT81
Lateral spinal nucleus T8ipsiLSpT81
Nucleus of dorsolateral funiculus T8ipsiNDLFT81
Area X T8ipsiSCL10T81
Spinal cord layer 5 T8ipsiSCL5T82
Spinal cord layer 1 T8ipsiSCL1T81
Spinal cord layer 7 T8ipsiSCL7T82
Thoracal segment 9ipsiT91
Lateral spinal nucleus T9ipsiLSpT91
Nucleus of dorsolateral funiculus T9ipsiNDLFT91
Area X T9ipsiSCL10T91
Spinal cord layer 5 T9ipsiSCL5T92
Spinal cord layer 1 T9ipsiSCL1T91
Spinal cord layer 7 T9ipsiSCL7T92
Thoracal segment 10ipsiT10-0.5
Lateral spinal nucleus T10ipsiLSpT101
Nucleus of dorsolateral funiculus T10ipsiNDLFT101
Area X T10ipsiSCL10T101
Spinal cord layer 5 T10ipsiSCL5T102
Spinal cord layer 1 T10ipsiSCL1T101
Spinal cord layer 7 T10ipsiSCL7T102
Thoracal segment 11ipsiT11-0.5
Lateral spinal nucleus T11ipsiLSpT111
Nucleus of dorsolateral funiculus T11ipsiNDLFT111
Area X T11ipsiSCL10T111
Spinal cord layer 5 T11ipsiSCL5T112
Spinal cord layer 1 T11ipsiSCL1T111
Spinal cord layer 7 T11ipsiSCL7T112
Thoracal segment 12ipsiT12-0.5
Lateral spinal nucleus T12ipsiLSpT121
Nucleus of dorsolateral funiculus T12ipsiNDLFT121
Area X T12ipsiSCL10T121
Spinal cord layer 5 T12ipsiSCL5T122
Spinal cord layer 1 T12ipsiSCL1T121
Spinal cord layer 7 T12ipsiSCL7T122
Thoracal segment 13ipsiT13-0.5
Lateral spinal nucleus T13ipsiLSpT131
Nucleus of dorsolateral funiculus T13ipsiNDLFT131
Area X T13ipsiSCL10T131
Spinal cord layer 5 T13ipsiSCL5T132
Spinal cord layer 1 T13ipsiSCL1T131
Spinal cord layer 7 T13ipsiSCL7T132
Thoracal segments layer 4ipsiTSegL42
Thoracal segments layer 5ipsiTSegL52
Thoracal segments layer 7ipsiTSegL72
Thoracal segments layer 10ipsiTSegL102
Lumbar segment 1ipsiL1-0.5
Lateral spinal nucleus L1ipsiLSpL11
Nucleus of dorsolateral funiculus L1ipsiNDLFL11
Spinal cord layers L1ipsiSCLL10
Area X L1ipsiSCL10L11
Spinal cord layer 5 L1ipsiSCL5L12
Spinal cord layer 1 L1ipsiSCL1L12
Spinal cord layer 2 L1ipsiSCL2L11
Spinal cord layer 7 L1ipsiSCL7L12
Lumbar segment 2ipsiL2-0.5
Lateral spinal nucleus L2ipsiLSpL21
Nucleus of dorsolateral funiculus L2ipsiNDLFL21
Spinal cord layers L2ipsiSCLL20
Area X L2ipsiSCL10L21
Spinal cord layer 5 L2ipsiSCL5L22
Spinal cord layer 1 L2ipsiSCL1L21
Spinal cord layer 7 L2ipsiSCL7L22
Lumbar segment 3ipsiL3-0.5
Lateral spinal nucleus L3ipsiLSpL31
Nucleus of dorsolateral funiculus L3ipsiNDLFL31
Spinal cord layers L3ipsiSCLL30
Area X L3ipsiSCL10L31
Spinal cord layer 5 L3ipsiSCL5L32
Spinal cord layer 3 L3ipsiSCL3L31
Spinal cord layer 4 L3ipsiSCL4L31
Spinal cord layer 1 L3ipsiSCL1L31
Spinal cord layer 7 L3ipsiSCL7L32
Spinal cord layer 8 L3ipsiSCL8L31
Lumbar segment 4ipsiL4-0.5
Lateral spinal nucleus L4ipsiLSpL41
Nucleus of dorsolateral funiculus L4ipsiNDLFL41
Spinal cord layers L4ipsiSCLL40
Area X L4ipsiSCL10L41
Spinal cord layer 5 L4ipsiSCL5L42
Spinal cord layer 3 L4ipsiSCL3L41
Spinal cord layer 4 L4ipsiSCL4L41
Spinal cord layer 1 L4ipsiSCL1L41
Spinal cord layer 7 L4ipsiSCL7L42
Spinal cord layer 8 L4ipsiSCL8L41
Lumbar segment 5ipsiL5-0.5
Lateral spinal nucleus L5ipsiLSpL51
Nucleus of dorsolateral funiculus L5ipsiNDLFL51
Spinal cord layers L5ipsiSCLL50
Area X L5ipsiSCL10L51
Spinal cord layer 5 L5ipsiSCL5L52
Spinal cord layer 3 L5ipsiSCL3L51
Spinal cord layer 4 L5ipsiSCL4L51
Spinal cord layer 1 L5ipsiSCL1L51
Spinal cord layer 7 L5ipsiSCL7L52
Spinal cord layer 8 L5ipsiSCL8L51
Lumbar segment 6ipsiL61
Lateral spinal nucleus L6ipsiLSpL61
Nucleus of dorsolateral funiculus L6ipsiNDLFL61
Spinal cord layers L6ipsiSCLL60
Area X L6ipsiSCL10L61
Spinal cord layer 5 L6ipsiSCL5L62
Spinal cord layer 1 L6ipsiSCL1L61
Spinal cord layer 7 L6ipsiSCL7L62
Lumbar segments layer 4ipsiLSegL42
Lumbar segments layer 5ipsiLSegL52
Lumbar segments layer 7ipsiLSegL72
Lumbar segments layer 10ipsiLSegL102
Sacral segment 1ipsiSa1-0.5
Lateral spinal nucleus S1ipsiLSpS11
Area X S1ipsiSCL10S11
Spinal cord layer 5 S1ipsiSCL5S12
Spinal cord layer 1 S1ipsiSCL1S11
Spinal cord layer 7 S1ipsiSCL7S12
Sacral segment 2ipsiSa2-0.5
Lateral spinal nucleus S2ipsiLSpS21
Area X S2ipsiSCL10S21
Spinal cord layer 5 S2ipsiSCL5S22
Spinal cord layer 1 S2ipsiSCL1S21
Spinal cord layer 7 S2ipsiSCL7S22
Sacral segment 3ipsiSa3-0.5
Lateral spinal nucleus S3ipsiLSpS31
Area X S3ipsiSCL10S31
Spinal cord layer 5 S3ipsiSCL5S32
Spinal cord layer 1 S3ipsiSCL1S31
Spinal cord layer 7 S3ipsiSCL7S32
Sacral segment 4ipsiSa4-0.5
Lateral spinal nucleus S4ipsiLSpS41
Area X S4ipsiSCL10S41
Spinal cord layer 5 S4ipsiSCL5S42
Spinal cord layer 1 S4ipsiSCL1S41
Spinal cord layer 7 S4ipsiSCL7S42
Sacral segments layer 4ipsiSSegL42
Sacral segments layer 5ipsiSSegL52
Sacral segments layer 7ipsiSSegL72
Sacral segments layer 10ipsiSSegL102
Coccygeal segment 1ipsiCo1-0.5
Lateral spinal nucleus Co1ipsiLSpCo11
Coccygeal segment 2ipsiCo2-0.5
Lateral spinal nucleus Co2ipsiLSpCo21
Coccygeal segment 3ipsiCo3-0.5
Lateral spinal nucleus Co3ipsiLSpCo31

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications