University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Intermediate zone L6 right


Abbreviation
izVHL6
Color       
Superior regionsVentral horn L6

SynonymsAbbr.Language
Intermediate zone L6izVHL6Eng

SubregionsSide
Spinal cord layer 7 L6right
Spinal cord layer 8 L6right

Output to

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleuscontraLDTg0
Barringtons nucleuscontraBar0.5
Locus coeruleuscontraLC0.5
Pontine reticular nucleus oral part dorsolateral partcontraPnODL0.5
Lateral hypothalamic areacontraLH3
Medial division of the hypothalamuscontraMdH2
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
ThalamuscontraT-0.5
Anteroventral thalamic nucleuscontraAV-0.5
Centrolateral thalamic nucleuscontraCL-0.5
Lateral anterior nucleus of the dorsal thalamuscontraLAAT-0.5
Posterior thalamic nuclear group medial partcontraPoMe-0.5
Mediodorsal thalamic nucleuscontraMD-0.5
Ventrolateral thalamic nucleuscontraVL-0.5
Ventromedial thalamic nucleuscontraVM-0.5
Lateral funiculuscontralf-2
Laterodorsal tegmental nucleusipsiLDTg0
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC1
Reticulotegmental nucleusipsiRETn-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus oral part dorsolateral partipsiPnODL1
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Dorsal column nucleiipsiDCN2
Lateral hypothalamic areaipsiLH1.5
Medial division of the hypothalamusipsiMdH2
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Suprachiasmatic nucleusipsiSCh0.5
Supraoptic nucleus [Supraoptic region]ipsiSO0.5
Adductor caudae dorsalis musclecontraMuscAdCaDo1
Adductor caudae dorsalis muscleipsiMuscAdCaDo1

Input from

NameSideAbbr.WeightDetails
Locus coeruleuscontraLC2
Reticular systemcontraRF3
Paramedian reticular nucleuscontraPMn3
Raphe obscurus nucleuscontraROb3
Central gray pons dorsolateral partipsiCGPdl2
Locus coeruleusipsiLC3
Locus coeruleus caudal partipsiLCca-0.5
Locus coeruleus ventral partipsiLCv-0.5
Reticulotegmental nucleusipsiRETn-0.5
Reticular systemipsiRF3
Paramedian reticular nucleusipsiPMn3
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Raphe magnus nucleusipsiRMg3
Raphe obscurus nucleusipsiROb3
Lateral agranular prefrontal cortexipsiAGl0.5
Medial agranular prefrontal cortexipsiAGm0.5
Primary somatosensory cortexipsiS10.5
Sciatic nerveipsisci-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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