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Rat connectome



Paramedian reticular nucleus right


Abbreviation
PMn
Color       
Superior regionsReticular system

SynonymsAbbr.Language
 PMR 
Paramedian medullary reticular group Eng
Paramedian nucleus reticularis Lat
Paramedian reticular formation Eng
Reticularis paramedianus Eng
Paramedian nucleus  
Paramedian reticular fieldPmNEng
Paramedian reticular fieldPMnEng
Nucleus reticularis paramedianusRpmLat
Nucleus reticularis paramedianus Eng
Paramedian reticular nucleusPMnEng

Output to

NameSideAbbr.WeightDetails
Cerebellar cortexcontraCERC-0.5
Simple lobulecontraSim0
Cerebellar lobule 7contraCERL71
Cerebellar lobule 8contraCERL80.5
Cerebellar lobule 10contraCERL10-0.5
Cerebellar lobule 6acontraCERL6a1
Cerebellar lobule 6bcontraCERL6b1
Cerebellar lobule 6ccontraCERL6c1
Intermediate reticular nucleuscontraIRt0
Rostroventrolateral reticular nucleuscontraRVL1
Ventrolateral pontine reticular formationcontravlPRF0
Hypoglossal nucleuscontra12S2
Nucleus of the solitary tractcontraSol1
Nucleus of the solitary tract commissural partcontraSolC2
Lateral paragigantocellular nucleuscontraLPGi0
Rostral ventral respiratory groupcontraRVRG-0.5
Dorsomedial nucleus posterior partcontraDMHp1
Posterior hypothalamic nucleuscontraPH1
Dorsolateral funiculuscontradlft-2
Ventrolateral funiculuscontravLF0.5
Cervical segmentscontraCSeg-0.5
Cervical segment 1contraCS10.5
Cervical segment 2contraCS2-0.5
Cervical segment 3contraCS3-0.5
Phrenic motoneurons of lamina 9 C3contraPh9C31
Cervical segment 4contraCS4-0.5
Cervical segment 5contraCS5-0.5
Ventral horn C5contraVHC51
Cervical segment 6contraCS6-0.5
Cervical segment 7contraCS7-0.5
Spinal cord layer 4 C7contraSCL4C70.5
Cervical segment 8contraCS8-0.5
Thoracal segmentscontraTSeg-0.5
Thoracal segment 1contraT1-0.5
Thoracal segment 2contraT2-0.5
Thoracal segment 3contraT3-0.5
Intermediolateral cell column T3contraIMLT33
Thoracal segment 4contraT4-0.5
Thoracal segment 5contraT5-0.5
Thoracal segment 6contraT6-0.5
Thoracal segment 7contraT7-0.5
Thoracal segment 8contraT8-0.5
Thoracal segment 9contraT9-0.5
Thoracal segment 10contraT10-0.5
Thoracal segment 11contraT11-0.5
Intermediolateral cell column T11contraIMLT110.5
Thoracal segment 12contraT12-0.5
Thoracal segment 13contraT13-0.5
Lumbar segment 1contraL1-0.5
Intermediomedial cell column L1contraIMML11
Intermediate zone L1contraizVHL13
Spinal cord layer 9 L1contraSCL9L13
Lumbar segment 2contraL2-0.5
Intermediomedial cell column L2contraIMML21
Ventral horn L2contraVHL21
Intermediate zone L2contraizVHL23
Spinal cord layer 9 L2contraSCL9L23
Lumbar segment 3contraL3-0.5
Intermediomedial cell column L3contraIMML31
Intermediate zone L3contraizVHL33
Spinal cord layer 9 L3contraSCL9L33
Lumbar segment 4contraL4-0.5
Intermediomedial cell column L4contraIMML41
Intermediate zone L4contraizVHL43
Spinal cord layer 9 L4contraSCL9L43
Lumbar segment 5contraL5-0.5
Intermediomedial cell column L5contraIMML51
Intermediate zone L5contraizVHL53
Spinal cord layer 9 L5contraSCL9L53
Spinal nucleus of the bulbocavernosus lumbal segment 5contraBCL51
Lumbar segment 6contraL6-0.5
Intermediomedial cell column L6contraIMML61
Intermediate zone L6contraizVHL63
Spinal cord layer 9 L6contraSCL9L63
Spinal nucleus of the bulbocavernosus lumbal segment 6contraBCL61
Laterodorsal tegmental nucleusipsiLDTg-0.5
Cerebellar cortexipsiCERC-0.5
Cerebellar hemisphereipsiCEREBH1
Posterior lobe of the cerebellumipsiCERCPL1
Simple lobuleipsiSim0
Anterior lobeipsiAnL2
Cerebellar lobule 4ipsiCERL42
Cerebellar lobule 5ipsiCERL52
Cerebellar lobule 7ipsiCERL72
Cerebellar lobule 8ipsiCERL82
Cerebellar lobule 9ipsiCERL92
Cerebellar lobule 10ipsiCERL102
Cerebellar lobule 6ipsiCERL62
Cerebellar lobule 6aipsiCERL6a1
Cerebellar lobule 6bipsiCERL6b1
Cerebellar lobule 6cipsiCERL6c1
Posterior lobe vermisipsiPLVERM2
Intermediate reticular nucleusipsiIRt0
Rostroventrolateral reticular nucleusipsiRVL1
Ventrolateral pontine reticular formationipsivlPRF1
Hypoglossal nucleusipsi12S2
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract commissural partipsiSolC2
Visceral nucleus of the nucleus of the tractus solitariusipsiVSol-0.5
Dorsal motor nucleus of vagusipsi10-0.5
Gracile nucleus principal partipsiGr-0.5
Lateral paragigantocellular nucleusipsiLPGi1
Retrotrapezoid nucleusipsiRTN0.5
Rostral ventral respiratory groupipsiRVRG-0.5
Dorsomedial nucleus posterior partipsiDMHp1
Posterior hypothalamic nucleusipsiPH1
Dorsolateral funiculusipsidlft-2
Dorsolateral funiculus lumbar partipsidlftL-2
Dorsolateral funiculus sacral partipsidlftS-2
Subthalamic nucleusipsiSTh1
Agranular insular cortex rostral partipsiRAIC2
Cardioacceleratory sympathetic preganglionic neurons in the intermediolateral nucleusipsiIMLcas1
Ventral funiculusipsivf-2
Ventrolateral funiculusipsivLF0.5
Cervical segmentsipsiCSeg-0.5
Cervical segment 1ipsiCS10.5
Intermediomedial cell column C1ipsiIMMC10
Cervical segment 2ipsiCS2-0.5
Intermediomedial cell column C2ipsiIMMC20
Cervical segment 3ipsiCS3-0.5
Intermediomedial cell column C3ipsiIMMC30
Phrenic motoneurons of lamina 9 C3ipsiPh9C33
Cervical segment 4ipsiCS43
Intermediomedial cell column C4ipsiIMMC40
Cervical segment 5ipsiCS5-0.5
Intermediomedial cell column C5ipsiIMMC50
Ventral horn C5ipsiVHC51
Cervical segment 6ipsiCS6-0.5
Intermediomedial cell column C6ipsiIMMC60
Cervical segment 7ipsiCS7-0.5
Intermediomedial cell column C7ipsiIMMC70
Cervical segment 8ipsiCS8-0.5
Intermediomedial cell column C8ipsiIMMC80
Thoracal segmentsipsiTSeg-0.5
Thoracal segment 1ipsiT1-0.5
Intermediolateral cell column T1ipsiIMLT10
Thoracal segment 2ipsiT2-0.5
Intermediolateral cell column T2ipsiIMLT20
Thoracal segment 3ipsiT3-0.5
Intermediolateral cell column T3ipsiIMLT33
Thoracal segment 4ipsiT4-0.5
Intermediolateral cell column T4ipsiIMLT40
Thoracal segment 5ipsiT5-0.5
Intermediolateral cell column T5ipsiIMLT50
Thoracal segment 6ipsiT6-0.5
Intermediolateral cell column T6ipsiIMLT60
Thoracal segment 7ipsiT7-0.5
Intermediolateral cell column T7ipsiIMLT70
Thoracal segment 8ipsiT8-0.5
Intermediolateral cell column T8ipsiIMLT80
Thoracal segment 9ipsiT9-0.5
Intermediolateral cell column T9ipsiIMLT90
Thoracal segment 10ipsiT10-0.5
Intermediolateral cell column T10ipsiIMLT100
Thoracal segment 11ipsiT11-0.5
Intermediolateral cell column T11ipsiIMLT111
Thoracal segment 12ipsiT12-0.5
Intermediolateral cell column T12ipsiIMLT120
Thoracal segment 13ipsiT13-0.5
Intermediolateral cell column T13ipsiIMLT130
Lumbar segmentsipsiLSeg-0.5
Lumbar segment 1ipsiL1-0.5
Intermediomedial cell column L1ipsiIMML12
Intermediate zone L1ipsiizVHL13
Spinal cord layer 9 L1ipsiSCL9L13
Lumbar segment 2ipsiL2-0.5
Intermediomedial cell column L2ipsiIMML22
Spinal cord layer 4 L2ipsiSCL4L20.5
Ventral horn L2ipsiVHL21
Intermediate zone L2ipsiizVHL23
Spinal cord layer 9 L2ipsiSCL9L23
Lumbar segment 3ipsiL3-0.5
Intermediomedial cell column L3ipsiIMML32
Intermediate zone L3ipsiizVHL33
Spinal cord layer 9 L3ipsiSCL9L33
Lumbar segment 4ipsiL4-0.5
Intermediomedial cell column L4ipsiIMML42
Intermediate zone L4ipsiizVHL43
Spinal cord layer 9 L4ipsiSCL9L43
Lumbar segment 5ipsiL5-0.5
Intermediomedial cell column L5ipsiIMML52
Intermediate zone L5ipsiizVHL53
Spinal cord layer 9 L5ipsiSCL9L53
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL51
Lumbar segment 6ipsiL6-0.5
Intermediomedial cell column L6ipsiIMML62
Intermediate zone L6ipsiizVHL63
Spinal cord layer 9 L6ipsiSCL9L63
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL61
Sacral segment 1ipsiSa1-0.5
Sacral segment 2ipsiSa2-0.5
Sacral segment 3ipsiSa3-0.5
Sacral segment 4ipsiSa4-0.5
Coccygeal segment 1ipsiCo1-0.5
Coccygeal segment 2ipsiCo2-0.5
Sphenopalatine ganglionipsiAutoSPG-0.5
Intrinsic lingual musculatureipsiOrgOCTmusci-10
Ventral stomach wallcontraOrgsStomVWS-0.5
Ventral stomach wallipsiOrgsStomVWS-0.5
Submandibular glandcontraOrgsSubg-10
Submandibular glandipsiOrgsSubg-10
Styloglossus muscle systemipsiMuscStyG-10

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0.5
Dorsolateral periaqueductal gray rostral partcontraPAGdlr0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0.5
Superior colliculus superficial layerscontraSCs0
Superior colliculus intermediate layerscontraSCi0
Superior colliculus deep layerscontraSCd1
Dorsolateral humpcontraCERcndl0
Anterior interposed nucleuscontraAIN0
Posterior interposed nucleuscontraCERpin1
Lateral cerebellar nucleuscontraCERL0
Medial cerebellar nucleuscontraMed3
Medial cerebellar nucleus rostral partcontraMedR-0.5
Intermediate reticular nucleuscontraIRt1
Mesencephalic reticular formationcontraMRF-2
Ventrolateral pontine reticular formationcontravlPRF2
Parabrachial nucleus medialcontraPBnMe-0.5
Dorsomedial hypothalamic nucleuscontraDMHy0
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR0
Lateral hypothalamic area dorsal partcontraLHd0
Lateral hypothalamic area ventral partcontraLHAvp0
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Periventricular zonecontraPVZ0
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Anterior cingulate cortexcontraACC3
Lateral agranular prefrontal cortexcontraAGl2
Cervical segment 6contraCS60.5
Cervical segment 7contraCS70.5
Lumbar segment 6contraL60.5
Sacral segment 1contraSa10.5
Sacral segment 2contraSa20.5
Dorsolateral periaqueductal gray caudal partipsiPAGdlc2
Dorsolateral periaqueductal gray rostral partipsiPAGdlr1
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0.5
Superior colliculus superficial layersipsiSCs0
Superior colliculus intermediate layersipsiSCi1
Superior colliculus deep layersipsiSCd0.5
Dorsolateral humpipsiCERcndl0
Anterior interposed nucleusipsiAIN0
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL0
Medial cerebellar nucleusipsiMed1
Medial cerebellar nucleus rostral partipsiMedR-0.5
Intermediate reticular nucleusipsiIRt2
Mesencephalic reticular formationipsiMRF-2
Ventrolateral pontine reticular formationipsivlPRF3
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB2
Parabrachial nucleus medialipsiPBnMe2
Parvicellular reticular nucleus rostral portionipsipRNr-0.5
Paratrigeminal nucleusipsiPa5-10
Supratrigeminal nucleusipsiSu51
Nucleus of the solitary tractipsiSol0.5
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Dorsomedial hypothalamic nucleusipsiDMHy0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR0
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area dorsal partipsiLHd0
Lateral hypothalamic area perifornical partipsiPFx2
Lateral hypothalamic area ventral partipsiLHAvp0
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Periventricular zoneipsiPVZ0
Medial part of the caudal perifornical areaipsiPeFCM0.5
Lateral part of the caudal perifornical areaipsiPeFCL0.5
Lateral habenular nucleus medial partipsiLHbM1
Dorsomedial coreipsiAcbCdm1
Ventromedial shellipsiAcbShvm1
Subthalamic nucleusipsiSTh1
Anterior cingulate cortexipsiACC3
Dorsal root ganglion C2ipsiDRGC2-3
Dorsal root ganglion C3ipsiDRGC3-3
Dorsal root ganglion C4ipsiDRGC4-3
Cervical segment 6ipsiCS60.5
Cervical segment 7ipsiCS70.5
Cervical segment 8ipsiCS80.5
Dorsal root ganglion L2ipsiDRGL2-3
Lumbar segment 6ipsiL60.5
Sacral segment 1ipsiSa10.5
Sacral segment 2ipsiSa20.5
Aortic nerveipsiaorticn0
TongueipsiOrgOCT-10
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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