University of Rostock
Department of Anatomy
Neuroscience Group
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Rat connectome
Colon left
Abbreviation
OrgsColonS
Color
Superior regions
Gut
Synonyms
Abbr.
Language
Colon
OrgsColonS
Eng
Subregions
Side
Colon ascending
left
Colon descending
left
Colon sigmoideum
left
Colon myenteric plexus
left
Colon submucosus plexus
left
Colon middle
left
Colon serosal plexus
left
Colon transverse myenteric plexus
left
Submucosal layer of the colonic wall
left
Ventral wall of the colon
left
Colon dorsally adjacent to uterine body-cervix region
left
Colon at the same rostrocaudal level as uterine horns
left
Output to
Name
Side
Abbr.
Weight
Details
Nucleus of the solitary tract
ipsi
Sol
-0.5
Nucleus of the solitary tract commissural part
ipsi
SolC
-0.5
Nucleus of the solitary tract medial part
ipsi
SolM
-0.5
Dorsal motor nucleus of vagus
ipsi
10
-0.5
Dorsal root ganglia
ipsi
DRG
-0.5
Dorsal root ganglion T12
ipsi
DRGT12
-0.5
Dorsal root ganglion T13
ipsi
DRGT13
-0.5
Dorsal root ganglion L1
ipsi
DRGL1
-0.5
Dorsal root ganglion L2
ipsi
DRGL2
-0.5
Dorsal root ganglion L3
ipsi
DRGL3
-0.5
Dorsal root ganglion L4
ipsi
DRGL4
-0.5
Dorsal root ganglion L5
ipsi
DRGL5
-0.5
Lumbar segment 6
ipsi
L6
-0.5
Dorsal root ganglion L6
ipsi
DRGL6
-0.5
Spinal cord layer 1 L6
ipsi
SCL1L6
-0.5
Sacral segment 1
ipsi
Sa1
-0.5
Dorsal root ganglion S1
ipsi
DRGS1
-0.5
Spinal cord layer 1 S1
ipsi
SCL1S1
-0.5
Dorsal root ganglion S2
ipsi
DRGS2
-1
Dorsal root ganglion S3
ipsi
DRGS3
-2
Nucleus of the solitary tract
contra
Sol
-0.5
Nucleus of the solitary tract commissural part
contra
SolC
-0.5
Nucleus of the solitary tract medial part
contra
SolM
-0.5
Dorsal motor nucleus of vagus
contra
10
-0.5
Lumbar segment 6
contra
L6
-0.5
Spinal cord layer 1 L6
contra
SCL1L6
-0.5
Sacral segment 1
contra
Sa1
-0.5
Spinal cord layer 1 S1
contra
SCL1S1
-0.5
Input from
Name
Side
Abbr.
Weight
Details
Periaqueductal gray
ipsi
PAG
2
Red nucleus
ipsi
R
2
Edinger Westphal nucleus
ipsi
EW
2
A5 noradrenaline cells
ipsi
A5
3
A7 noradrenaline cells
ipsi
A7
2
Barringtons nucleus
ipsi
Bar
3
Locus coeruleus
ipsi
LC
2
Parabrachial nucleus
ipsi
PB
1
Lateral reticular nucleus
ipsi
LRt
3
Medullary reticular nucleus
ipsi
MdD
-10
Subcoeruleus nucleus
ipsi
SubC
2
C1 adrenaline cells
ipsi
C1
3
Ambiguus nucleus
ipsi
Amb
2
Area postrema
ipsi
AP
3
Nucleus of the solitary tract
ipsi
Sol
3
Dorsal motor nucleus of vagus
ipsi
10
3
Raphe nuclei
ipsi
RAN
3
Raphe magnus nucleus
ipsi
RMg
-10
Inferior olive
ipsi
IO
2
Ventromedial medulla oblongata
ipsi
MeObvm
-10
Lateral hypothalamic nucleus
ipsi
LHN
1
Paraventricular hypothalamic nucleus
ipsi
Pa
3
Supraoptic hypothalamic part
ipsi
SOHYP
1
Dorsal root ganglion T8
ipsi
DRGT8
1
Intercalated nucleus T8
ipsi
IClT8
0.5
Intermediolateral cell column T8
ipsi
IMLT8
1
Dorsal horn T8
ipsi
DHT8
0.5
Superficial dorsal horn T8
ipsi
SDHT8
3
Dorsal root ganglion T9
ipsi
DRGT9
1
Dorsal root ganglion T10
ipsi
DRGT10
1
Dorsal root ganglion T11
ipsi
DRGT11
1
Dorsal root ganglion T12
ipsi
DRGT12
1
Dorsal root ganglion T13
ipsi
DRGT13
1
Dorsal root ganglion L1
ipsi
DRGL1
3
Intermediolateral cell column L1
ipsi
IMLL1
3
Lumbar parasympathetic nucleus L1
ipsi
LPSyL1
3
Lumbar dorsal commissural nucleus L1
ipsi
LDComL1
2
Dorsal horn L1
ipsi
DHL1
0.5
Superficial dorsal horn L1
ipsi
SDHL1
3
Dorsal root ganglion L2
ipsi
DRGL2
3
Dorsal root ganglion L3
ipsi
DRGL3
1
Lumbar dorsal commissural nucleus L3
ipsi
LDComL3
0.5
Dorsal root ganglion L4
ipsi
DRGL4
1
Lumbar dorsal commissural nucleus L4
ipsi
LDComL4
0.5
Dorsal root ganglion L5
ipsi
DRGL5
1
Intermediolateral cell column L5
ipsi
IMLL5
0.5
Lumbar parasympathetic nucleus L5
ipsi
LPSyL5
0.5
Lumbar dorsal commissural nucleus L5
ipsi
LDComL5
1
Dorsal horn L5
ipsi
DHL5
0.5
Superficial dorsal horn L5
ipsi
SDHL5
3
Dorsal root ganglion L6
ipsi
DRGL6
3
Intermediolateral cell column L6
ipsi
IMLL6
1
Lumbar parasympathetic nucleus L6
ipsi
LPSyL6
1
Lumbar dorsal commissural nucleus L6
ipsi
LDComL6
2
Lateral dorsal horn L6
ipsi
LDHL6
0.5
Medial dorsal horn L6
ipsi
MDHL6
0.5
Superficial dorsal horn L6
ipsi
SDHL6
3
Dorsal root ganglion S1
ipsi
DRGS1
3
Intermediolateral cell column S1
ipsi
IMLS1
3
Sacral dorsal commissural nucleus S1
ipsi
SDComS1
2
Sacral parasympathetic nucleus S1
ipsi
SPSyS1
3
Dorsal horn S1
ipsi
DHS1
0.5
Superficial dorsal horn S1
ipsi
SDHS1
3
Dorsal root ganglion S2
ipsi
DRGS2
1
Sacral dorsal commissural nucleus S2
ipsi
SDComS2
0.5
Nucleus of the solitary tract
contra
Sol
-0.5
Dorsal motor nucleus of vagus
contra
10
-0.5
Pelvic ganglion
ipsi
AutoPeG
-0.5
Dorsal major pelvic ganglion
ipsi
AutoDPeG
-0.5
Nodose ganglion
ipsi
AutoNoG
3
Colon myenteric plexus
ipsi
OrgsColonSmy
-0.5
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
|
Staff
|
neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
|
Students
|
Links
|
Publications