University of Rostock

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Rat connectome



Intermediolateral cell column L6 left


Abbreviation
IMLL6
Color       
Superior regionsLumbar segment 6

SynonymsAbbr.Language
Intermediolateral cell column L6IMLL6Eng

SubregionsSide
Intermediolateral cell column pars funicularis L6left
Intermediolateral cell column pars principalis L6left
Intermediolateral cell column pars spinalis L6left
Sympathetic preganglionic cell column L6left

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG3
Laterodorsal tegmental nucleusipsiLDTg0
Barringtons nucleusipsiBar3
Locus coeruleusipsiLC1
Reticulotegmental nucleusipsiRETn-0.5
Ventromedial reticular formationipsiVMRF1
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus oral part dorsolateral partipsiPnODL1
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB1
Koelliker Fuse nucleusipsiKF-0.5
Lateral parabrachial nucleusipsiLPB2
Parabrachial nucleus medialipsiPBnMe1
Mesencephalic trigeminal nucleusipsiMe51
Nucleus of the solitary tractipsiSol1
Lumbar segment 1ipsiL1-1
Periaqueductal graycontraPAG1.5
Laterodorsal tegmental nucleuscontraLDTg0
Barringtons nucleuscontraBar1.5
Locus coeruleuscontraLC0.5
Ventromedial reticular formationcontraVMRF3
Pontine reticular nucleus oral part dorsolateral partcontraPnODL0.5
Lateral parabrachial nucleuscontraLPB1
Parabrachial nucleus medialcontraPBnMe0.5
Mesencephalic trigeminal nucleuscontraMe50.5
Pelvic ganglionipsiAutoPeG1
Pelvic nervesipsiAutoPN-0.5
Pudendal nerveipsipude-0.5
Pelvic ganglioncontraAutoPeG-2
ColonipsiOrgsColonS1
Distal colonipsiOrgsColonDi-0.5
Distal coloncontraOrgsColonDi-0.5
Bulbocavernosus muscleipsiMuscBCV-0.5
External urethral sphincter muscleipsiMuscEUS-0.5
Ischiocavernosus muscleipsiMuscicav-0.5
Musculus sphincter ani externusipsiMuscsphae-0.5
Musculus sphincter urethraeipsiMuscSphUre-0.5
PenisipsiOrgPenis2
Corpus cavernosumipsiOrgCC3
Corpus spongiosumipsiOrgSPG1
Ventral prostate glandipsiOrgProstV3
Urinary bladderipsiOrgUrBLa-0.5
Urinary bladder baseipsiOrgUrBLaB-0.5
Detrusor muscle of the urinary bladderipsiOrgUrBLaDe-0.5
Trigone of the urinary bladderipsiOrgUrBLaT-10
Corpus cavernosumcontraOrgCC-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG3
Central gray lateral partipsiCGL-0.5
Central gray pons dorsolateral partipsiCGPdl3
Lateral part of pontine central grayipsiCGPl3
Dorsolateral pontine tegmentumipsiDLPT-0.5
Caudolateral part of the laterodorsal tegmental nucleusipsiCLLDTg-0.5
A5 noradrenaline cellsipsiA51
A7 noradrenaline cellsipsiA7-0.5
Barringtons nucleusipsiBar-0.5
Locus coeruleusipsiLC2
Locus coeruleus caudal partipsiLCca-0.5
Locus coeruleus ventral partipsiLCv-0.5
Parapyramidal nucleusipsiPPy-0.5
Reticulotegmental nucleusipsiRETn-0.5
Magnocellular reticular nucleus alpha partipsiNRMCa-0.5
Dorsolateral pontine reticular formationipsiPRNDL3
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus oral part caudal partipsiPnOc1
Pontine reticular nucleus oral part dorsolateral partipsiPnODL2
Pontine reticular nucleus oral part lateral partipsiPnOL1
Pontine reticular nucleus caudal partipsiPNC-0.5
Lateral part of pontine reticular nucleus caudal partipsiPNCL-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Parabrachial nucleus dorsal partipsiPBD-0.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus ventral partipsiGiV1
Medial subnucleus reticularis ventralisipsiMSRV1
Subcoeruleus nucleusipsiSubC-0.5
Medulla oblongataipsiMeOb-0.5
Ambiguus nucleusipsiAmb-0.5
Nucleus of the solitary tractipsiSol-0.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe obscurus nucleus caudal partipsiRObc-0.5
Raphe pallidus nucleusipsiRPa2
Nucleus interfascicularis hypoglossiipsiNIFH-0.5
Paragigantocellular reticular nucleusipsiPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi2
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area posterior partipsiLHAp0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Paraventricular hypothalamic nucleus dorsal partipsiPaD-0.5
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag0
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo1
A11 dopamine cellsipsiA111
Basal retrochiasmatic areaipsiBRCh1
Parafascicular thalamic nucleus prerubral partipsiPFPR1
Central graycontraCG1
Central gray lateral partcontraCGL-0.5
Lateral part of pontine central graycontraCGPl3
Dorsolateral pontine tegmentumcontraDLPT-0.5
Caudolateral part of the laterodorsal tegmental nucleuscontraCLLDTg-0.5
A5 noradrenaline cellscontraA50.5
Barringtons nucleuscontraBar-0.5
Locus coeruleuscontraLC0.5
Locus coeruleus caudal partcontraLCca-0.5
Locus coeruleus ventral partcontraLCv-0.5
Pontine reticular nucleus oral part caudal partcontraPnOc1
Pontine reticular nucleus oral part dorsolateral partcontraPnODL2
Pontine reticular nucleus oral part lateral partcontraPnOL1
Koelliker Fuse nucleuscontraKF0
Gigantocellular reticular nucleuscontraGi0.5
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Gigantocellular reticular nucleus ventral partcontraGiV0.5
Medial subnucleus reticularis ventraliscontraMSRV1
Subcoeruleus nucleuscontraSubC-0.5
Medulla oblongatacontraMeOb-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus interfascicularis hypoglossicontraNIFH-0.5
Lateral paragigantocellular nucleuscontraLPGi3
Lateral hypothalamic areacontraLH0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM0.5
A11 dopamine cellscontraA110.5
Parafascicular thalamic nucleus prerubral partcontraPFPR0.5
Paracervical ganglia of the uterine cervixipsiAutoParGutcx-0.5
Pelvic ganglionipsiAutoPeG-0.5
Urinary bladderipsiOrgUrBLa-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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