University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Submedius thalamic nucleus dorsal part left


Abbreviation
SubD
Color       
Superior regionsSubmedius thalamic nucleus

SynonymsAbbr.Language
Submedius thalamic nucleus dorsal partSubDEng
Submedius thalamic nucleus dorsal portion Eng

Output to

NameSideAbbr.WeightDetails
Parabrachial nucleusipsiPB1
Trigeminal subnucleus caudalisipsi5SSC-0.5
Reticular thalamic nucleusipsiRt-0.5
Zona incertaipsiZI-0.5
Caudate putamenipsiCPu-0.5
Primary somatosensory cortex barrel fieldipsiS1BF3
Primary somatosensory cortex forelimb regionipsiS1FL0
Ventrolateral orbital areaipsiVLO2
Lateral part of ventrolateral orbital areaipsiLVLO-0.5
Ventrolateral orbital area layer 5ipsiVLOL5-0.5
Ventrolateral orbital area layer 3ipsiVLOL3-0.5
Ventrolateral orbital area layer 4ipsiVLOL4-0.5
Ventrolateral orbital area layer 2ipsiVLOL2-0.5
Ventral part of the ventrolateral orbital areaipsiVVLO-0.5
Primary somatosensory cortex barrel fieldcontraS1BF1
Primary somatosensory cortex forelimb regioncontraS1FL0
Ventrolateral orbital areacontraVLO1

Input from

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC2
Substantia nigra reticular partipsiSNR3
Nucleus incertus pars compactaipsiNIc1
Nucleus incertus pars dissipataipsiNId0.5
Spinal trigeminal nucleusipsiSp5nc-0.5
Spinal trigeminal nucleus caudal part ventral partipsiSp5CV1
Spinal trigeminal nucleus ventrolateral partipsiSp5ncVL1
Trigeminal subnucleus caudalisipsi5SSC2
Prefrontal cortexipsiPFC2
Primary motor cortex genital areaipsiM1ge-0.5
Lateral orbital cortexipsiLO3
Ventrolateral orbital areaipsiVLO2
Lateral part of ventrolateral orbital areaipsiLVLO3
Spinal trigeminal nucleus caudal part ventral partcontraSp5CV2
Superficial spinal trigeminal nucleus caudal partcontraSSp5C3
Spinal trigeminal nucleus ventrolateral partcontraSp5ncVL2
Trigeminal subnucleus caudaliscontra5SSC1
Anteromedial thalamic nucleuscontraAM2
Central medial thalamic nucleuscontraCM2
Rhomboid thalamic nucleuscontraRh2
Reuniens thalamic nucleuscontraRe2
Ventrolateral thalamic nucleuscontraVL2
Ventromedial thalamic nucleuscontraVM2
Lateral orbital cortexcontraLO1
Lateral part of ventrolateral orbital areacontraLVLO1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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