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Rat connectome



Nucleus incertus pars dissipata left


Abbreviation
NId
Color       
Superior regionsNucleus incertus

SynonymsAbbr.Language
Nucleus incertus diffuse partNIdEng
Nucleus incertus pars dissipataNIdEng

SubregionsSide
Nucleus incertus lateral part of the diffuse partleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG2
Dorsolateral periaqueductal grayipsiDLPAG3
Lateral periaqueductal grayipsiLPAG3
Periaqueductal gray dorsal partipsiPAGd0.5
Periaqueductal gray rostral dorsal partipsiPAGdr1
Ventrolateral periaqueductal grayipsiVLPAG3
Red nucleusipsiR0
Pararubral nucleusipsiPaR0.5
Superior colliculusipsiSC-0.5
Superficial gray layer of the superior colliculusipsiSuG2
Intermediate gray layer of the superior colliculusipsiInG2
Retrolaterodorsal tegmental nucleusipsirLDT2
Substantia nigra compact partipsiSNC3
Ventral tegmental area A10ipsiVTA3
Interfascicular nucleus apical partipsiIFNa1
Interfascicular nucleus intermediate partipsiIFNi0
Interfascicular nucleus lateral partipsiIFNl1
Interfascicular nucleus rostral partipsiIFNr1
Caudal linear nucleus of the rapheipsiCLi3
Retrorubral nucleusipsiRR0.5
Laterodorsal tegmental nucleusipsiLDTg3
Ventral tegmental nucleusipsiVTg3
Dorsal tegmental nucleusipsiDTg3
Edinger Westphal nucleusipsiEW3
Interstitial nucleus of CajalipsiInC0.5
Nucleus incertus pars compactaipsiNIc-3
Nucleus incertus pars dissipataipsiNId1
Reticulotegmental nucleusipsiRETn1
Prepositus nucleusipsiPr1
Mesencephalic reticular formationipsiMRF1
Pontine reticular nucleusipsiPRN1
Pontine reticular nucleus oral partipsiPnO3
Cuneiforme nucleusipsiCnF1
Parabrachial nucleusipsiPB1
Parvicellular reticular nucleus alpha partipsiPCRtA2
Supragenual nucleusipsiSGe1
Mesencephalic trigeminal nucleusipsiMe51
Dorsal linear nucleus of the rapheipsiLIRD3
Rostral linear nucleus of the rapheipsiRLi1
Median raphe nucleusipsiMnR3
Superior central raphe nucleus lateral partipsiCSl3
Superior central raphe nucleus medial partipsiCSm3
Raphe magnus nucleusipsiRMg1
Cuneate nucleusipsiCu0.5
Inferior olive beta subnucleusipsiIOBe2
Inferior olive ventrolateral protrusionipsiIOVL2
Superior paraolivary nucleusipsiSPO0
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp2
Lateral hypothalamic area tuberal subfornical region [Preoptic anterior region]ipsiLHAsft3
Lateral zoneipsiLHA1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Anterior hypothalamic area posterior partipsiAHAP0.5
Dorsal hypothalamic areaipsiDA-0.5
Posterior hypothalamic areaipsiPHA2
Tuberal areaipsiTA2
Ventral tuberomammillary nucleus 2ipsiTMV22
Paraventricular hypothalamic nucleusipsiPa1
Periventricular hypothalamic nucleusipsiPe-0.5
Suprachiasmatic nucleus dorsal divisionipsiSChd1
Lateral mammillary nucleusipsiLM2
Premammillary nucleus dorsal partipsiPMD1
Supramammillar nucleusipsiSuM2
Supramammillar nucleus lateral partipsiSuML2
Perifornical nucleusipsiPeF3
Central medial thalamic nucleusipsiCM1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh0.5
Mediodorsal thalamic nucleusipsiMD0.5
Mediodorsal thalamic nucleus lateral partipsiMDL3
Submedius thalamic nucleus dorsal partipsiSubD0.5
Submedius thalamic nucleus ventral partipsiSubV0.5
Paraventricular thalamic nucleusipsiPV1
Reuniens thalamic nucleusipsiRe3
Ventromedial thalamic nucleusipsiVM3
Reticular thalamic nucleusipsiRt1
Zona incertaipsiZI1
Lateral habenular nucleusipsiLHb3
Lateral habenular nucleus medial partipsiLHbM2
Pretectal regionipsiPRT1
Pineal glandipsiPi-0.5
Amygdaloid complexipsiAC1
Basolateral amygdaloid nucleusipsiBL1
Basomedial amygdaloid nucleusipsiBM0.5
Posterior basomedial nucleusipsiBMP2
Bed nucleus of the stria terminalisipsiBST1
Bed nucleus of the stria terminalis medial division posterolateral partipsiBSTMPL3
Cortical amygdaloid nucleusipsiCAn1
Medial amygdaloid nucleusipsiMe-0.5
Amygdalohippocampal areaipsiAHi2
ClaustrumipsiCl2
Accumbens nucleusipsiAc3
HippocampusipsiHIPP3
Field CA2 of hippocampusipsiCA22
Field CA3 of hippocampusipsiCA32
PresubiculumipsiPrS0.5
PostsubiculumipsiPost0.5
Lateral entorhinal cortexipsiLEnt0.5
Medial entorhinal cortex ventral partipsiMEntV0.5
Piriform cortexipsiPir1
Retrosplenial dorsalipsiRSd0.5
Retrosplenial ventral partipsiRSPv0.5
Retrosplenial agranular cortexipsiRSA0.5
Cingulate cortexipsiCg1
Cingulate cortex area 1 rostral partipsiCg1r1
Cingulate cortex area 2 rostral partipsiCg2r1
Frontal association cortexipsiFrA1
Frontal cortex area 2ipsiFr23
Prefrontal cortexipsiPFC1
Lateral agranular prefrontal cortexipsiAGl0.5
Medial prefrontal cortexipsimPFC1
Medial agranular prefrontal cortexipsiAGm1
Interpeduncular nucleusipsiIP-0.5
Interpeduncular nucleus apical subnucleusipsiIPA0.5
Interpeduncular nucleus dorsal subnucleusipsiIPRd2
Interpeduncular nucleus intermediate subnucleusipsiIPI0.5
Interpeduncular nucleus lateral subnucleusipsiIPL1
Lateral septal nucleus caudal partipsiLSc0.5
Lateral septal nucleus ventral partipsiLSV3
Septofimbrial nucleusipsiSFi3
Triangular septal nucleusipsiTS3
Septohypothalamic nucleusipsiSHy3
Superficial gray layer of the superior colliculuscontraSuG1
Intermediate gray layer of the superior colliculuscontraInG1
Ventral tegmental area A10contraVTA1
Interfascicular nucleus apical partcontraIFNa2
Interfascicular nucleus lateral partcontraIFNl2
Interfascicular nucleus rostral partcontraIFNr2
Caudal linear nucleus of the raphecontraCLi2
Ventral tegmental nucleuscontraVTg2
Reticulotegmental nucleuscontraRETn0.5
Pontine reticular nucleus oral partcontraPnO2
Cuneiforme nucleuscontraCnF0.5
Parabrachial nucleuscontraPB0.5
Parvicellular reticular nucleus alpha partcontraPCRtA1
Dorsal linear nucleus of the raphecontraLIRD2
Rostral linear nucleus of the raphecontraRLi0.5
Median raphe nucleuscontraMnR2
Nucleus of the horizontal limb of the diagonal bandcontraHDB1
Lateral preoptic areacontraLPO1
Posterior hypothalamic areacontraPHA1
Tuberal areacontraTA1
Supramammillar nucleuscontraSuM1
Parafascicular thalamic nucleuscontraPF2
Reuniens thalamic nucleuscontraRe2
Lateral habenular nucleuscontraLHb2
Lateral habenular nucleus medial partcontraLHbM1
Pretectal regioncontraPRT0.5
Amygdaloid complexcontraAC0.5
Accumbens nucleuscontraAc1
Field CA2 of hippocampuscontraCA21
Field CA3 of hippocampuscontraCA31
Lateral septal nucleus ventral partcontraLSV1
Septofimbrial nucleuscontraSFi1
Triangular septal nucleuscontraTS1
Septohypothalamic nucleuscontraSHy1

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Retrolaterodorsal tegmental nucleusipsirLDT3
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg2
Nucleus incertus pars compactaipsiNIc1
Nucleus incertus pars dissipataipsiNId1
Prepositus nucleusipsiPr1
Middle rostrocaudal extent of the pontine reticular nucleus oral partipsiPnOmrce3
Dorsal raphe nucleusipsiDR-3
Superior central raphe nucleusipsiCS2
Superior central raphe nucleus lateral partipsiCSl2
Superior central raphe nucleus medial partipsiCSm2
Diagonal band of BrocaipsiDBB2
Medial septal nucleusipsiMS1
Lateral preoptic areaipsiLPO1
Medial preoptic nucleus medial partipsiMPOM2
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral zoneipsiLHA2
Lateral hypothalamic areaipsiLH-2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Posterior hypothalamic areaipsiPHA1
Supramammillar nucleus lateral partipsiSuML1
Parafascicular thalamic nucleusipsiPF1
Zona incertaipsiZI1
Retrosplenial dorsalipsiRSd1
Anterior cingulate cortexipsiACC3
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL1
Medial agranular prefrontal cortexipsiAGm3
Lateral orbital cortexipsiLO2
Medial orbital cortexipsiMO2
Ventrolateral orbital areaipsiVLO2
Interpeduncular nucleus central subnucleusipsiIPRc3
Interpeduncular nucleus rostral subnucleusipsiIPR2
Interpeduncular nucleus rostrolateral subnucleusipsiIPRL2
Septofimbrial nucleusipsiSFi2
Triangular septal nucleusipsiTS3
Periaqueductal graycontraPAG-3
Pontine periventricular graycontraPPG-3
Reticulotegmental nucleuscontraRETn-3
Dorsal raphe nucleus caudal partcontraDRC1
Median raphe nucleuscontraMnR2
Superior central raphe nucleuscontraCS2
Lateral habenular nucleuscontraLHb2
Anterior cingulate cortexcontraACC1
Prelimbic cortexcontraPrL1
Orbital cortexcontraOrC1
Ventrolateral orbital areacontraVLO2
Interpeduncular nucleuscontraIP2
Septofimbrial nucleuscontraSFi2
Triangular septal nucleuscontraTS3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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