| Name | Side | Abbr. | Weight | Details |
|---|
| Superior colliculus | contra | SC | 0.5 | |
| Superior colliculus intermediate white layer | contra | SAI | 1.5 | |
| Superior colliculus intermediate layers | contra | SCi | 1 | |
| Intermediate gray layer of the superior colliculus | contra | InG | 3 | |
| Intermediate white layer of the superior colliculus | contra | InWh | 3 | |
| Lateral portion of the intermediate white layer of the superior colliculus | contra | InWhL | 2 | |
| Lateral part of the stratum griseum intermediale of the superior colliculus | contra | SCiL | -0.5 | |
| Deep gray layer of the superior colliculus | contra | DpG | 3 | |
| Lateral portion of the deep gray layer of the superior colliculus | contra | DpGL | 2 | |
| Deep white layer of the superior colliculus | contra | DpWh | 3 | |
| Lateral portion deep white layer of the superior colliculus | contra | DpWhL | 1.5 | |
| Superior colliculus medial part | contra | mSC | 1 | |
| Mesopontine reticular formation | contra | MPRF | -0.5 | |
| Parabrachial nucleus | contra | PB | 2 | |
| Koelliker Fuse nucleus | contra | KF | 1 | |
| Caudal Koelliker Fuse nucleus | contra | KFc | 1 | |
| Lateral parabrachial nucleus | contra | LPB | 1 | |
| Medullary reticular nucleus | contra | MdD | -0.5 | |
| Parvicellular reticular nucleus | contra | PCRt | -0.5 | |
| Accessory abducens nucleus | contra | ACVI | 0.5 | |
| Dorsal portion of the facial motor nucleus | contra | 7D | 0.5 | |
| Around facial nucleus | contra | 7A | -0.5 | |
| Supratrigeminal nucleus surrounding area | contra | SUTsur | -0.5 | |
| Motor trigeminal nucleus surrounding region | contra | Mo5sur | -0.5 | |
| Motor trigeminal nucleus jaw closing component | contra | Mo5jcc | 0.5 | |
| Motor trigeminal nucleus jaw opening component | contra | Mo5joc | -0.5 | |
| Nucleus of the solitary tract | contra | Sol | -0.5 | |
| Cuneate nucleus | contra | Cu | 3 | |
| Tuberomammillary nucleus | contra | TuM | 2 | |
| Dorsomedial hypothalamic nucleus | contra | DMHy | 2 | |
| Preoptic anterior region | contra | PAreg | 2 | |
| Lateral hypothalamic area | contra | LH | 2 | |
| Medial division of the hypothalamus | contra | MdH | 0.5 | |
| Anterior hypothalamic area | contra | AHA | 2 | |
| Posterior hypothalamic area | contra | PHA | 2 | |
| Ventromedial hypothalamic nucleus | contra | VMH | 2 | |
| Arcuate nucleus | contra | Arc | 2 | |
| Paraventricular hypothalamic nucleus | contra | Pa | 2 | |
| Periventricular hypothalamic nucleus | contra | Pe | 2 | |
| Suprachiasmatic nucleus | contra | SCh | 2 | |
| Supraoptic nucleus [Supraoptic region] | contra | SO | 2 | |
| Mammillary body | contra | CMAM | 2 | |
| Thalamus | contra | T | 0.5 | |
| Lateral group of the dorsal thalamus | contra | LAT | 2 | |
| Submedius thalamic nucleus dorsal part | contra | SubD | 1 | |
| Ventral posteromedial thalamic nucleus | contra | VPM | 3 | |
| Posterior group | contra | PTG | 2 | |
| Dysgranular insular cortex caudal part | contra | DIc | 3 | |
| Granular insular cortex caudal part | contra | GIC | 3 | |
| Forelimb motor cortex | contra | FMCx | 2 | |
| Caudal forelimb motor area | contra | CFMA | 2 | |
| Lateral part of the granular cortex of forelimb motor regions | contra | LFMCx | 2 | |
| Lumbar segment 2 | contra | L2 | 2 | |
| Central gray | ipsi | CG | -0.5 | |
| Periaqueductal gray | ipsi | PAG | -0.5 | |
| Inferior colliculus | ipsi | ICOL | -0.5 | |
| Superior colliculus | ipsi | SC | 0 | |
| Tegmental area | ipsi | TGA | -0.5 | |
| Paravermis area | ipsi | CERCPA | -0.5 | |
| Vermis | ipsi | VERM | -0.5 | |
| Probst bundle | ipsi | prb | -2 | |
| Dorsal reticular formation | ipsi | DRF | -0.5 | |
| Intermediate reticular nucleus | ipsi | IRt | -0.5 | |
| Mesopontine reticular formation | ipsi | MPRF | -0.5 | |
| Cuneiforme nucleus | ipsi | CnF | -0.5 | |
| Parabrachial nucleus | ipsi | PB | 3 | |
| Koelliker Fuse nucleus | ipsi | KF | 3 | |
| Caudal Koelliker Fuse nucleus | ipsi | KFc | 3 | |
| Lateral parabrachial nucleus | ipsi | LPB | 3 | |
| Lateral parabrachial nucleus external part | ipsi | LPBE | 1.5 | |
| Lateral parabrachial nucleus internal part | ipsi | LPBI | 0 | |
| Lateral parabrachial nucleus ventrolateral part | ipsi | LPBVL | -0.5 | |
| Parabrachial nucleus external divison lateral part | ipsi | PBeDL | 0.5 | |
| Parabrachial nucleus medial | ipsi | PBnMe | 0.5 | |
| Medial parabrachial nucleus external part | ipsi | MPBE | 0.5 | |
| Medullary reticular nucleus | ipsi | MdD | -0.5 | |
| Parvicellular reticular nucleus | ipsi | PCRt | -0.5 | |
| Parvicellular reticular nucleus alpha part | ipsi | PCRtA | -0.5 | |
| Accessory abducens nucleus | ipsi | ACVI | -0.5 | |
| Dorsal portion of the facial motor nucleus | ipsi | 7D | 0.5 | |
| Around facial nucleus | ipsi | 7A | -0.5 | |
| Supratrigeminal nucleus | ipsi | Su5 | -0.5 | |
| Supratrigeminal nucleus surrounding area | ipsi | SUTsur | -0.5 | |
| Motor trigeminal nucleus | ipsi | Mo5 | -0.5 | |
| Motor trigeminal nucleus surrounding region | ipsi | Mo5sur | -0.5 | |
| Motor trigeminal nucleus jaw closing component | ipsi | Mo5jcc | 1 | |
| Motor trigeminal nucleus jaw opening component | ipsi | Mo5joc | 0.5 | |
| Principal sensory trigeminal nucleus | ipsi | Pr5 | 3 | |
| Spinal trigeminal nucleus interpolar part dorsomedial part | ipsi | Sp5IDM | -0.5 | |
| Dorsomedial portion of the spinal trigeminal nucleus oral part | ipsi | Sp5ODM | -0.5 | |
| Trigeminal subnucleus caudalis lamina 1 | ipsi | 5SSCL1 | 3 | |
| Trigeminal subnucleus caudalis lamina 2i | ipsi | 5SSCL2i | 3 | |
| Trigeminal subnucleus caudalis lamina 2o | ipsi | 5SSCL2o | 1.5 | |
| Trigeminal subnucleus caudalis lamina 3 | ipsi | 5SSCL3 | 3 | |
| Trigeminal subnucleus caudalis lamina 4 | ipsi | 5SSCL4 | 3 | |
| Trigeminal subnucleus caudalis lamina 5 | ipsi | 5SSCL5 | 1 | |
| Trigeminal ganglion | ipsi | 5Gn | -0.5 | |
| Nucleus of the solitary tract | ipsi | Sol | -0.5 | |
| Nucleus of the solitary tract caudal part | ipsi | Solca | 1 | |
| Nucleus of the solitary tract medial part | ipsi | SolM | 1 | |
| Nucleus of the solitary tract rostral part | ipsi | Solro | 0 | |
| Nucleus of the solitary tract rostrolateral part | ipsi | SolRL | 0 | |
| Cuneate nucleus | ipsi | Cu | 1 | |
| Tuberomammillary nucleus | ipsi | TuM | 2 | |
| Dorsomedial hypothalamic nucleus | ipsi | DMHy | 2 | |
| Preoptic anterior region | ipsi | PAreg | 2 | |
| Lateral hypothalamic area | ipsi | LH | 2 | |
| Medial division of the hypothalamus | ipsi | MdH | 0.5 | |
| Anterior hypothalamic area | ipsi | AHA | 2 | |
| Posterior hypothalamic area | ipsi | PHA | 2 | |
| Ventromedial hypothalamic nucleus | ipsi | VMH | 2 | |
| Arcuate nucleus | ipsi | Arc | 2 | |
| Paraventricular hypothalamic nucleus | ipsi | Pa | 2 | |
| Periventricular hypothalamic nucleus | ipsi | Pe | 2 | |
| Suprachiasmatic nucleus | ipsi | SCh | 2 | |
| Supraoptic nucleus [Supraoptic region] | ipsi | SO | 2 | |
| Mammillary body | ipsi | CMAM | 2 | |
| Thalamus | ipsi | T | 0.5 | |
| Centrolateral thalamic nucleus | ipsi | CL | 1 | |
| Parafascicular thalamic nucleus | ipsi | PF | 1 | |
| Lateral group of the dorsal thalamus | ipsi | LAT | 1 | |
| Mediodorsal thalamic nucleus medial part | ipsi | MDM | 1 | |
| Submedius thalamic nucleus | ipsi | Sub | -0.5 | |
| Submedius thalamic nucleus dorsal part | ipsi | SubD | 2 | |
| Ventrobasal complex | ipsi | VB | 3 | |
| Ventral posteromedial thalamic nucleus | ipsi | VPM | 1 | |
| Ventrobasal complex anterior part | ipsi | VBa | -0.5 | |
| Oval paracentral thalamic nucleus | ipsi | OPC | -0.5 | |
| Zona incerta | ipsi | ZI | 3 | |
| Central amygdaloid nucleus | ipsi | Ce | -1 | |
| Central amygdaloid nucleus lateral division | ipsi | CeL | 1 | |
| Posteromedial barrel subfield C1 | ipsi | PMBSFC1 | 1 | |
| Posteromedial barrel subfield C1 mediolateral part | ipsi | PMBSFC1mL | 1 | |
| Posteromedial barrel subfield C1 dorsoventral part | ipsi | PMBSFC1dv | 1 | |
| Dorsal horn C1 | ipsi | DHC1 | 2.5 | |
| Spinal cord layer 1 C1 | ipsi | SCL1C1 | 0 | |
| Spinal cord layer 2 C1 | ipsi | SCL2C1 | 0 | |
| Dorsal horn C1 rostrocaudal column | ipsi | DHC1rcc | 2.5 | |
| Dorsal horn C1 magnocellular zone | ipsi | DHC1mc | 2.5 | |
| Lumbar segment 2 | ipsi | L2 | 2 | |
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