University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Superior colliculus rostral part left


Abbreviation
rSC
Color       
Superior regionsSuperior colliculus

SynonymsAbbr.Language
Rostral superior colliculus Eng
Superior colliculus rostral partrSCEng

SubregionsSide
Superior colliculus rostral three-fourthsleft
Superior colliculus rostral part layersleft
Superior colliculus rostral part two-thirdsleft
Border of the superior colliculus rostral part between stratum opticum and stratum griseum superficialeleft
Superior colliculus rostral part lateral portionleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Inferior colliculusipsiICOL1
Cuneiforme nucleus medial partipsiCnFm1
Parabrachial nucleus dorsal partipsiPBD1
Paragigantocellular reticular nucleusipsiPGi2
Lateral posterior thalamic nucleusipsiLP-0.5
Subthalamic nucleusipsiSTh2
Paragigantocellular reticular nucleuscontraPGi-0.5

Input from

NameSideAbbr.WeightDetails
Substantia nigra reticular partipsiSNR3
Intermediate reticular nucleusipsiIRt1
Medial reticular formationipsiRFm1
Mesopontine reticular formationipsiMPRF2
Pontine reticular nucleusipsiPRN2
Gigantocellular reticular nucleusipsiGi3
Medullary reticular nucleusipsiMdD1
Medullary reticular nucleus dorsal partipsiMdDd3
Parvicellular reticular nucleusipsiPCRt3
Motor trigeminal nucleusipsiMo52
Principal sensory trigeminal nucleusipsiPr5-0.5
Olivary pretectal nucleusipsiOPT3
Mediodorsal thalamic nucleus paralaminar partipsiMDPL2
Reticular thalamic nucleusipsiRt2
RetinaipsiRET3
Retina temporal partipsiRETt-0.5
Lower temporal crescent of the retinaipsiRETLtc2
Peripheral temporal retinaipsiRETpt-0.5
Medial globus pallidusipsiMGP1
Dorsal striatumipsiCPud2
Ventral striatumipsiCPuv1
Cervical segments rostral partipsiCSegR2
Intermediate reticular nucleuscontraIRt1.5
Medial reticular formationcontraRFm1.5
Mesopontine reticular formationcontraMPRF3
Pontine reticular nucleuscontraPRN3
Pontine reticular nucleus dorsal partcontraPRNd3
Gigantocellular reticular nucleuscontraGi3
Medullary reticular nucleuscontraMdD1.5
Medullary reticular nucleus dorsal partcontraMdDd4
Parvicellular reticular nucleuscontraPCRt4
Motor trigeminal nucleuscontraMo53
Principal sensory trigeminal nucleuscontraPr53
Cuneate nucleuscontraCu3
Reticular thalamic nucleuscontraRt2
RetinacontraRET3
Retina nasal partcontraRETna3
Lower temporal crescent of the retinacontraRETLtc3
Cervical segments rostral partcontraCSegR3
Facial nerveipsi7fn2
Facial nervecontra7fn3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications