University of Rostock

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Rat connectome



Parabrachial nucleus dorsal part left


Abbreviation
PBD
Color       
Superior regionsParabrachial nucleus

SynonymsAbbr.Language
Parabrachial nucleus dorsal partPBD 
Dorsal parabrachial body Eng
Dorsal parabrachial nucleusDPBEng
Nucleus parabrachialis dorsalisNPBD 

SubregionsSide
Caudal part of the dorsal parabrachial nucleusleft
Dorsal part of the dorsal parabrachial nucleusleft
Medially dorsal parabrachial nucleusleft
Lateral margin of the dorsal parabrachial nucleusleft
Dorsal lateral parabrachial nucleusleft
Lateral part of the dorsal parabrachial nucleusleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG2
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray medial partipsiPAGm1
Red nucleusipsiR1
Ventral tegmental area A10ipsiVTA4
Cerebellar lobule 2ipsiCERL2-1
Cerebellar lobule 3ipsiCERL3-1
Cerebellar lobule 1ipsiCERL1-1
Cerebellar lobule 4ipsiCERL4-1
Cerebellar lobule 5ipsiCERL5-1
Lateral cerebellar nucleusipsiCERL1
Parvicellular reticular nucleus caudal portionipsipRNc2
Boetzinger complexipsiBo1
Spinal trigeminal nucleusipsiSp5nc2
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR2
Median raphe nucleusipsiMnR2
Raphe magnus nucleusipsiRMg3
Caudoventral respiratory groupipsiCVRG1
Paragigantocellular reticular nucleusipsiPGi2
Rostral ventral respiratory groupipsiRVRG1.5
Diagonal band of BrocaipsiDBB2.5
Basal nucleus MeynertipsiB1
Substantia innominataipsiSI1
Medial preoptic nucleusipsiMPO-0.5
Median preoptic nucleusipsiMnPO2.5
Medial division of the hypothalamusipsiMdH3
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2.5
Midlateral posterior hypothalamic areaipsiPHAmL1
Ventromedial hypothalamic nucleusipsiVMH-1
Ventromedial hypothalamic nucleus central partipsiVMHC2
Ventromedial hypothalamic nucleus shellipsiVMS0
Arcuate nucleusipsiArc2
Arcuate nucleus caudal halfipsiArcch-0.5
Paraventricular nucleus of the hypothalamus magnocellular division medial magnocellular partipsiPaAMm3
Paraventricular hypothalamic nucleus lateral magnocellular part [Periventricular zone anterior region]ipsiPaLM3
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP3
Paraventricular hypothalamic nucleus dorsomedial capipsiPadmc3
Paraventricular hypothalamic nucleus magnocellular division between PaLM and PaAMmipsiPaMagb3
Paraventricular hypothalamic nucleus parvocellular division posterior partipsiPavPoP3
Ventral perinuclear paraventricular hypothalamic areaipsiPPaV3
Periventricular hypothalamic nucleusipsiPe0.5
Perinuclear zone of the supraoptic nucleus of the hypothalamusipsipnzSO2.5
Supraoptic nucleus perinuclear zoneipsiSOpnz-0.5
Retrochiasmatic areaipsiRCh4
Anteroventral thalamic nucleusipsiAV2
Central medial thalamic nucleus lateral partipsiCMl2
Centrolateral thalamic nucleus rostral partipsiCLr2
Parafascicular thalamic nucleusipsiPF1
Paraventricular thalamic nucleusipsiPV3
Ventrolateral thalamic nucleus dorsal partipsiVLD2
Ventral posterior thalamic nucleus parvicellular partipsiVPPC1
Ventral posteromedial thalamic nucleus parvicellular partipsiVPMpc2
Intralaminar nucleiipsiILN1
Reticular thalamic nucleusipsiRt2
Ventral thalamus dorsomedial partipsiVNTdm2
Zona incertaipsiZI1
Medial forebrain bundleipsimfb-2
Stria medullaris of the thalamusipsism-2
Basolateral amygdaloid nucleusipsiBL-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2.5
Central amygdaloid nucleusipsiCe2.5
Central amygdaloid nucleus medial divisionipsiCeM2.5
Lateral globus pallidusipsiLGP1.5
Fornixipsif-2
Interpeduncular nucleusipsiIP0
Olfacto septal areaipsiOSA-0.5
Lateral septal nucleus rostral partipsiLSr-0.5
Intermediolateral cell column C1ipsiIMLC1-0.5
Dorsal horn C1ipsiDHC1-0.5
Intermediolateral cell column C2ipsiIMLC2-0.5
Dorsal horn C2ipsiDHC2-0.5
Intermediolateral cell column C3ipsiIMLC3-0.5
Dorsal horn C3ipsiDHC3-0.5
Intermediolateral cell column C4ipsiIMLC4-0.5
Dorsal horn C4ipsiDHC4-0.5
Intermediolateral cell column C5ipsiIMLC5-0.5
Dorsal horn C5ipsiDHC5-0.5
Intermediolateral cell column C6ipsiIMLC6-0.5
Dorsal horn C6ipsiDHC6-0.5
Intermediolateral cell column C7ipsiIMLC7-0.5
Dorsal horn C7ipsiDHC7-0.5
Intermediolateral cell column C8ipsiIMLC8-0.5
Dorsal horn C8ipsiDHC8-0.5
Intermediolateral cell column T1ipsiIMLT1-0.5
Dorsal horn T1ipsiDHT1-0.5
Intermediolateral cell column T2ipsiIMLT2-0.5
Dorsal horn T2ipsiDHT2-0.5
Intermediolateral cell column T3ipsiIMLT3-0.5
Dorsal horn T3ipsiDHT3-0.5
Intermediolateral cell column T4ipsiIMLT4-0.5
Dorsal horn T4ipsiDHT4-0.5
Intermediolateral cell column T5ipsiIMLT5-0.5
Dorsal horn T5ipsiDHT5-0.5
Intermediolateral cell column T6ipsiIMLT6-0.5
Dorsal horn T6ipsiDHT6-0.5
Intermediolateral cell column T7ipsiIMLT7-0.5
Dorsal horn T7ipsiDHT7-0.5
Intermediolateral cell column T8ipsiIMLT8-0.5
Dorsal horn T8ipsiDHT8-0.5
Intermediolateral cell column T9ipsiIMLT9-0.5
Dorsal horn T9ipsiDHT9-0.5
Intermediolateral cell column T10ipsiIMLT10-0.5
Dorsal horn T10ipsiDHT10-0.5
Intermediolateral cell column T11ipsiIMLT11-0.5
Dorsal horn T11ipsiDHT11-0.5
Intermediolateral cell column T12ipsiIMLT12-0.5
Dorsal horn T12ipsiDHT12-0.5
Intermediolateral cell column T13ipsiIMLT13-0.5
Dorsal horn T13ipsiDHT13-0.5
Intermediolateral cell column L1ipsiIMLL1-0.5
Dorsal horn L1ipsiDHL1-0.5
Intermediolateral cell column L2ipsiIMLL2-0.5
Dorsal horn L2ipsiDHL2-0.5
Intermediolateral cell column L3ipsiIMLL3-0.5
Dorsal horn L3ipsiDHL3-0.5
Intermediolateral cell column L4ipsiIMLL4-0.5
Dorsal horn L4ipsiDHL4-0.5
Intermediolateral cell column L5ipsiIMLL5-0.5
Dorsal horn L5ipsiDHL5-0.5
Intermediolateral cell column L6ipsiIMLL6-0.5
Dorsal horn L6ipsiDHL6-0.5
Intermediolateral cell column S1ipsiIMLS1-0.5
Dorsal horn S1ipsiDHS1-0.5
Intermediolateral cell column S2ipsiIMLS2-0.5
Dorsal horn S2ipsiDHS2-0.5
Intermediolateral cell column S3ipsiIMLS3-0.5
Dorsal horn S3ipsiDHS3-0.5
Intermediolateral cell column S4ipsiIMLS4-0.5
Dorsal horn S4ipsiDHS4-0.5
Intermediolateral cell column Co1ipsiIMLCo1-0.5
Dorsal horn Co1ipsiDHCo1-0.5
Intermediolateral cell column Co2ipsiIMLCo2-0.5
Dorsal horn Co2ipsiDHCo2-0.5
Intermediolateral cell column Co3ipsiIMLCo3-0.5
Dorsal horn Co3ipsiDHCo3-0.5
Periaqueductal graycontraPAG2
Lateral periaqueductal graycontraLPAG1
Periaqueductal gray medial partcontraPAGm1
Red nucleuscontraR2
Ventral tegmental area A10contraVTA3
Lateral cerebellar nucleuscontraCERL1
Boetzinger complexcontraBo0
Median raphe nucleuscontraMnR1
Caudoventral respiratory groupcontraCVRG0
Rostral ventral respiratory groupcontraRVRG0
Medial preoptic nucleuscontraMPO-0.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]contraAVPe0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Retrochiasmatic areacontraRCh1.5
Anteroventral thalamic nucleuscontraAV1
Central medial thalamic nucleus lateral partcontraCMl1
Centrolateral thalamic nucleuscontraCL3
Centrolateral thalamic nucleus rostral partcontraCLr1
Parafascicular thalamic nucleuscontraPF3
Mediodorsal thalamic nucleus medial partcontraMDM3
Ventrolateral thalamic nucleus dorsal partcontraVLD1
Ventral posterior thalamic nucleus parvicellular partcontraVPPC1
Reticular thalamic nucleuscontraRt1
Zona incertacontraZI0.5
Medial forebrain bundlecontramfb-2
Stria medullaris of the thalamuscontrasm0
Fornixcontraf-2
Lateral septal nucleus rostral partcontraLSr-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG3
Central gray dorsolateral partipsiCGDL3
Ventrolateral periaqueductal grayipsiVLPAG3
Inferior colliculus rostral partipsiICOLR3
Nucleus of the brachium of the inferior colliculusipsiBIC3
Superior colliculusipsiSC3
Superior colliculus intermediate white layeripsiSAI1
Superior colliculus intermediate white layer lateral partipsiSAIL0.5
Superior colliculus intermediate white layer medial partipsiSAIM1
Superior colliculus superficial layersipsiSCs1
Intermediate gray layer of the superior colliculusipsiInG2
Superior colliculus deep layersipsiSCd3
Superior colliculus medial half deep layersipsimhSCdL3
Superior colliculus rostral partipsirSC1
Tegmental areaipsiTGA3
Substantia nigra A9ipsiSN0
Ventral tegmental area A10ipsiVTA-0.5
Laterodorsal tegmental nucleusipsiLDTg3
Pedunculopontine tegmental nucleusipsiPPTg-0.5
A5 noradrenaline cellsipsiA5-0.5
Pontomesencephalic grayipsiPoMG-0.5
Gigantocellular reticular nucleus alpha partipsiGiA1
Parvicellular reticular nucleus rostral portionipsipRNr-0.5
C3 adrenaline cellsipsiC3-10
Spinal trigeminal nucleus caudal part superficial layersipsiSp5CasL-2
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract caudal partipsiSolca-0.5
Caudal nucleus of the solitary tract medial partipsiSolcame-0.5
Nucleus of the solitary tract dorsal partipsiSolD-0.5
Nucleus of the solitary tract dorsolateral partipsiSolDL-0.5
Nucleus of the solitary tract intermediate partipsiSolIM-0.5
Nucleus of the solitary tract interstitial partipsiSoli-0.5
Nucleus of the solitary tract medial partipsiSolM-0.5
Nucleus of the solitary tract posteromedial partipsiSolpm-0.5
Dorsal parasolitary regionipsiDPSol-0.5
Solitary tractipsisol-0.5
A1 noradrenergic cellsipsiA13
Lateral hypothalamic area posterior partipsiLHAp-0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Ventromedial hypothalamic nucleus central partipsiVMHC2
Ventromedial hypothalamic nucleus shellipsiVMS0
Arcuate nucleusipsiArc2
Periventricular hypothalamic nucleusipsiPe0.5
Retrochiasmatic areaipsiRCh4
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA0.5
Central amygdaloid nucleusipsiCe2
Caudate putamenipsiCPu-0.5
Parasubthalamic nucleusipsiPSTh1
Dorsal granular insular cortexipsiDGI2
Cervical segment 5ipsiCS53
Cervical segment 6ipsiCS63
Cervical segment 7ipsiCS73
Cervical segment 8ipsiCS83
Thoracal segment 1ipsiT13
Lumbar segment 2ipsiL23
Lumbar segment 3ipsiL33
Dorsal horn L3ipsiDHL3-0.5
Ventral horn L3ipsiVHL3-0.5
Lumbar segment 4ipsiL43
Dorsal horn L4ipsiDHL4-0.5
Ventral horn L4ipsiVHL4-0.5
Lumbar segment 5ipsiL53
Dorsal horn L5ipsiDHL5-0.5
Ventral horn L5ipsiVHL5-0.5
Lumbar segment 6ipsiL63
Dorsal horn L6ipsiDHL6-0.5
Ventral horn L6ipsiVHL6-0.5
Dorsal horn S1ipsiDHS1-0.5
Ventral horn S1ipsiVHSa1-0.5
Dorsal horn S2ipsiDHS2-0.5
Ventral horn S2ipsiVHSa2-0.5
Ventrolateral periaqueductal graycontraVLPAG0.5
Superior colliculuscontraSC1
Superior colliculus intermediate white layercontraSAI1
Superior colliculus intermediate white layer lateral partcontraSAIL0.5
Superior colliculus intermediate white layer medial partcontraSAIM1
Superior colliculus superficial layerscontraSCs1
Intermediate gray layer of the superior colliculuscontraInG1
Superior colliculus deep layerscontraSCd1
Nucleus of the solitary tract caudal partcontraSolca1
Central amygdaloid nucleuscontraCe1
Dorsal granular insular cortexcontraDGI2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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