University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Prefrontal cortex layer 5 left


Abbreviation
PFCL5
Color       
Superior regionsPrefrontal cortex deep layers

SynonymsAbbr.Language
Prefrontal cortex layer 5PFCL5 

SubregionsSide
Prefrontal cortex layer 5aleft
Prefrontal cortex layer 5bleft
Prefrontal cortex layer 5 pyramidal cellsleft

Output to

NameSideAbbr.WeightDetails
Dorsal tegmental nucleus ventromedial partipsiDTgVM3
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp3
Nucleus of the solitary tractipsiSol-0.5
Dorsal motor nucleus of vagusipsi10-0.5
Anterior group of the dorsal thalamusipsiATN3
Mediodorsal thalamic nucleusipsiMD3
Mediodorsal thalamic nucleus lateral portion of anterior halfipsiMDah-0.5
Mediodorsal thalamic nucleus medial portion of anterior half ipsiMDMh-0.5
Mediodorsal thalamic nucleus caudal halfipsiMDCah0
Mediodorsal thalamic nucleus lateral partipsiMDL3
Mediodorsal thalamic nucleus medial partipsiMDM-0.5
Reticular thalamic nucleus extreme ventromedial aspect of central anterior posterior levelsipsiRtvmcap-0.5
Zona incertaipsiZI3
Accumbens nucleusipsiAc0.5
Caudate putamenipsiCPu3
Perirhinal cortexipsiA35-0.5
Cervical segment 1ipsiCS11
Cervical segment 2ipsiCS21
Cervical segment 5ipsiCS5-0.5
Cervical segment 6ipsiCS6-0.5
Dorsal tegmental nucleus ventromedial partcontraDTgVM3
Mesencephalic trigeminal nucleus caudal polecontraMe5cp1.5
Nucleus of the solitary tractcontraSol-0.5
Dorsal motor nucleus of vaguscontra10-0.5
Cervical segment 1contraCS11
Cervical segment 2contraCS23

Input from

NameSideAbbr.WeightDetails
Ventral tegmental area anterior partipsiVTAA3
Intralaminar nuclei of the dorsal thalamusipsiILM2
Mediodorsal thalamic nucleusipsiMD1
Midline group of the dorsal thalamusipsiMTN2
Mid-rostral level of dorsolateral entorhinal cortex layer 4ipsiDLEntMrL42
Mid-rostral level of dorsolateral entorhinal cortex layer 5ipsiDLEntMrL52
Mid-rostral level of dorsolateral entorhinal cortex layer 6ipsiDLEntMrL62

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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