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Rat connectome

Mesencephalic trigeminal nucleus caudal pole right

Abbreviation	Me5cp
Color
Superior regions	Mesencephalic trigeminal nucleus caudal part

Synonyms	Abbr.	Language
Mesencephalic trigeminal nucleus caudal pole	Me5cp	Eng
Caudal part of trigeminal nucleus		Eng
Caudal portion part of the nucleus of the mesencephalic tract of the trigeminal nerve		Eng
Caudal Me5		Eng
Caudal part of the mesencephalic trigeminal nucleus		Eng

Output to

Name	Side	Abbr.	Weight
Superior colliculus	contra	SC	2
Median substantia nigra A9	contra	SNMe	0
Motor trigeminal nucleus jaw closing component	contra	Mo5jcc	2
Ventrolateral thalamic nucleus	contra	VL	3
Nucleus of Darkschewitsch	ipsi	Dk	-0.5
Oculomotor nucleus	ipsi	3	-2
Ventral portion of the oculomotor nucleus	ipsi	3Ve	-0.5
Dorsomedial portion of the oculomotor nucleus	ipsi	3dm	1
Dorsolateral portion of the oculomotor nucleus	ipsi	3dL	1
Superior colliculus	ipsi	SC	2
Median substantia nigra A9	ipsi	SNMe	-0.5
Interstitial nucleus of Cajal	ipsi	InC	-0.5
CX-zone	ipsi	CXZO	0.5
X-zone	ipsi	XZO	0.5
Cerebellar lobule 2a zone A	ipsi	CERL2aA	0.5
Cerebellar lobule 2a zone B	ipsi	CERL2aB	0.5
Cerebellar lobule 2a zone X	ipsi	CERL2aX	0.5
Cerebellar lobule 2a zone C1	ipsi	CERL2aC1	0.5
Cerebellar lobule 2a zone C2	ipsi	CERL2aC2	0.5
Cerebellar lobule 2a zone C3	ipsi	CERL2aC3	0.5
Cerebellar lobule 2b zone A	ipsi	CERL2bA	0.5
Cerebellar lobule 2b zone B	ipsi	CERL2bB	0.5
Cerebellar lobule 2b zone X	ipsi	CERL2bX	0.5
Cerebellar lobule 2b zone C1	ipsi	CERL2bC1	0.5
Cerebellar lobule 2b zone C2	ipsi	CERL2bC2	0.5
Cerebellar lobule 2b zone C3	ipsi	CERL2bC3	0.5
Cerebellar lobule 3a zone A	ipsi	CERL3aA	0.5
Cerebellar lobule 3a zone B	ipsi	CERL3aB	0.5
Cerebellar lobule 3a zone X	ipsi	CERL3aX	0.5
Cerebellar lobule 3a zone C1	ipsi	CERL3aC1	0.5
Cerebellar lobule 3a zone C2	ipsi	CERL3aC2	0.5
Cerebellar lobule 3a zone C3	ipsi	CERL3aC3	0.5
Cerebellar lobule 3b zone A	ipsi	CERL3bA	0.5
Cerebellar lobule 3b zone B	ipsi	CERL3bB	0.5
Cerebellar lobule 3b zone X	ipsi	CERL3bX	0.5
Cerebellar lobule 3b zone C1	ipsi	CERL3bC1	0.5
Cerebellar lobule 3b zone C2	ipsi	CERL3bC2	0.5
Cerebellar lobule 3b zone C3	ipsi	CERL3bC3	0.5
Cerebellar lobule 1 zone A	ipsi	CERL1A	0.5
Cerebellar lobule 1 zone B	ipsi	CERL1B	0.5
Cerebellar lobule 1 zone C1	ipsi	CERL1C1	0.5
Cerebellar lobule 1 zone C2	ipsi	CERL1C2	0.5
Cerebellar lobule 1 zone C3	ipsi	CERL1C3	0.5
Cerebellar lobule 1 zone X	ipsi	CERL1X	0.5
Cerebellar lobule 4	ipsi	CERL4	0.5
Cerebellar lobule 4 zone A	ipsi	CERL4A	0.5
Cerebellar lobule 4 zone B	ipsi	CERL4B	0.5
Cerebellar lobule 4 zone X	ipsi	CERL4X	0.5
Cerebellar lobule 4 zone C1	ipsi	CERL4C1	0.5
Cerebellar lobule 4 zone C2	ipsi	CERL4C2	0.5
Cerebellar lobule 4 zone C3	ipsi	CERL4C3	0.5
Cerebellar lobule 5	ipsi	CERL5	0.5
Cerebellar lobule 5 zone A	ipsi	CERL5A	0.5
Cerebellar lobule 5 zone B	ipsi	CERL5B	0.5
Cerebellar lobule 5 zone X	ipsi	CERL5X	0.5
Cerebellar lobule 5 zone C1	ipsi	CERL5C1	0.5
Cerebellar lobule 5 zone C2	ipsi	CERL5C2	0.5
Cerebellar lobule 5 zone C3	ipsi	CERL5C3	0.5
Cerebellar lobule 8 zone X	ipsi	CERL8X	0.5
Cerebellar lobule 9	ipsi	CERL9	0.5
Cerebellar lobule 9a zone A	ipsi	CERL9aA	1
Cerebellar lobule 9a zone D0	ipsi	CERL9aD0	1
Cerebellar lobule 9a zone D1	ipsi	CERL9aD1	1
Cerebellar lobule 9a zone D2	ipsi	CERL9aD2	1
Cerebellar lobule 9a zone X	ipsi	CERL9aX	1
Cerebellar lobule 9b zone A	ipsi	CERL9bA	1
Cerebellar lobule 9b zone D0	ipsi	CERL9bD0	1
Cerebellar lobule 9b zone D1	ipsi	CERL9bD1	1
Cerebellar lobule 9b zone D2	ipsi	CERL9bD2	1
Cerebellar lobule 9b zone X	ipsi	CERL9bX	1
Cerebellar lobule 9c zone A	ipsi	CERL9cA	1
Cerebellar lobule 9c zone D0	ipsi	CERL9cD0	1
Cerebellar lobule 9c zone D1	ipsi	CERL9cD1	1
Cerebellar lobule 9c zone D2	ipsi	CERL9cD2	1
Cerebellar lobule 9c zone X	ipsi	CERL9cX	1
Cerebellar lobule 10b zone A	ipsi	CERL10bA	0.5
Cerebellar lobule 10b zone D0	ipsi	CERL10bD0	0.5
Cerebellar lobule 10b zone D1	ipsi	CERL10bD1	0.5
Cerebellar lobule 10b zone D2	ipsi	CERL10bD2	0.5
Cerebellar lobule 10b zone X	ipsi	CERL10bX	0.5
Cerebellar lobule 10a zone A	ipsi	CERL10aA	0.5
Cerebellar lobule 10a zone D0	ipsi	CERL10aD0	0.5
Cerebellar lobule 10a zone D1	ipsi	CERL10aD1	0.5
Cerebellar lobule 10a zone D2	ipsi	CERL10aD2	0.5
Cerebellar lobule 10a zone X	ipsi	CERL10aX	0.5
Cerebellar lobule 6a zone A	ipsi	CERL6aA	3
Cerebellar lobule 6a zone B	ipsi	CERL6aB	3
Cerebellar lobule 6a zone X	ipsi	CERL6aX	3
Cerebellar lobule 6a zone C1	ipsi	CERL6aC1	3
Cerebellar lobule 6a zone C2	ipsi	CERL6aC2	3
Cerebellar lobule 6a zone C3	ipsi	CERL6aC3	3
Cerebellar lobule 6b zone A	ipsi	CERL6bA	3
Cerebellar lobule 6b zone B	ipsi	CERL6bB	3
Cerebellar lobule 6b zone C1	ipsi	CERL6bC1	3
Cerebellar lobule 6b zone C2	ipsi	CERL6bC2	3
Cerebellar lobule 6b zone C3	ipsi	CERL6bC3	3
Cerebellar lobule 6b zone X	ipsi	CERL6bX	3
Cerebellar lobule 6c zone A	ipsi	CERL6cA	3
Cerebellar lobule 6c zone B	ipsi	CERL6cB	3
Cerebellar lobule 6c zone C1	ipsi	CERL6cC1	3
Cerebellar lobule 6c zone C2	ipsi	CERL6cC2	3
Cerebellar lobule 6c zone C3	ipsi	CERL6cC3	3
Cerebellar lobule 6c zone X	ipsi	CERL6cX	3
Cerebellar lobule 6d zone A	ipsi	CERL6dA	3
Cerebellar lobule 6d zone B	ipsi	CERL6dB	3
Cerebellar lobule 6d zone X	ipsi	CERL6dX	3
Locus coeruleus	ipsi	LC	-0.5
Probst bundle	ipsi	prb	-0.5
Reticular system	ipsi	RF	-0.5
Intermediate reticular nucleus	ipsi	IRt	1
Parabrachial nucleus medial	ipsi	PBnMe	-2
Lateral reticular nucleus dorsolateral part	ipsi	LRtDL	-2
Parvicellular reticular nucleus	ipsi	PCRt	3
Dorsolateral parvicellular reticular nucleus	ipsi	PCRtDL	-0.5
Parvicellular reticular nucleus alpha part	ipsi	PCRtA	-2
Subcoeruleus nucleus	ipsi	SubC	-0.5
Ambiguus nucleus	ipsi	Amb	3
Ambiguus nucleus external formation	ipsi	AmbEx	-0.5
Facial nucleus	ipsi	7	-0.5
Hypoglossal nucleus	ipsi	12S	1
Intertrigeminal nucleus	ipsi	I5	3
Supratrigeminal nucleus	ipsi	Su5	3
Area around the motor nucleus of the trigeminal nerve	ipsi	5aa	-0.5
Motor trigeminal nucleus	ipsi	Mo5	4
Motor root of the trigeminal nerve	ipsi	m5	-0.5
Motor trigeminal nucleus dorsolateral part	ipsi	Mo5DL	3
Dorsal subdivision of the motor trigeminal nucleus	ipsi	Mo5D	3
Motor trigeminal nucleus jaw closing component	ipsi	Mo5jcc	4
Principal sensory trigeminal nucleus dorsomedial part	ipsi	Pr5DM	3
Spinal trigeminal nucleus interpolar part	ipsi	Sp5I	-0.5
Spinal trigeminal nucleus interpolar part dorsomedial part	ipsi	Sp5IDM	-0.5
Spinal trigeminal nucleus oral part	ipsi	Sp5O	-0.5
Dorsomedial portion of the spinal trigeminal nucleus oral part	ipsi	Sp5ODM	3
Peritrigeminal zone	ipsi	P5	3
Trochlear nucleus	ipsi	4	-0.5
Medial vestibular nucleus	ipsi	MVe	0.5
Inferior vestibular nucleus	ipsi	IVN	0.5
Dorsal medulla oblongata	ipsi	DMe	-0.5
Inferior olive	ipsi	IO	-0.5
Dorsolateral brainstem	ipsi	MYCdL	-2
Masseteric nerve	ipsi	mass	3
Inferior alveolar nerve	ipsi	ialv	0.5
Periodontal ligaments	ipsi	OrgPeriLig	-0.5
Muscle spindles of the masseter muscle	ipsi	MuscMassSpi	-0.5

Input from

Name	Side	Abbr.	Weight
Substantia innominata	contra	SI	1
Preoptic region	contra	PREO	-0.5
Lateral zone	contra	LHA	-0.5
Arcuate nucleus	contra	Arc	-0.5
Paraventricular hypothalamic nucleus	contra	Pa	-0.5
Amygdaloid complex	contra	AC	0
Claustrum	contra	Cl	-0.5
Anterior cingulate cortex	contra	ACC	1
Anterior cingulate cortex layer 5	contra	ACCL5	1
Prelimbic cortex	contra	PrL	1.5
Prelimbic cortex rostral part	contra	PrLr	1
Prelimbic cortex rostral part layer 5	contra	PrLrL5	1
Infralimbic cortex	contra	IL	1.5
Infralimbic cortex layer 5	contra	ILL5	1
Insular cortex	contra	ICX	1.5
Agranular insular cortex	contra	AI	1
Agranular insular cortex layer 5	contra	AIL5	1
Rostromedial part of the lateral agranular insular cortex lateral part	contra	AiLarm	0.5
Dysgranular insular cortex	contra	DI	1
Dysgranular insular cortex layer 5	contra	DIL5	1.5
Granular insular cortex	contra	GI	0.5
Granular insular cortex layer 5	contra	GIL5	0.5
Insular cortex caudal part	contra	ICXca	1
Insular cortex layer 5	contra	ICXL5	1
Insular cortex layer 6	contra	ICXL6	0.5
Insular cortex rostral part	contra	ICXR	0.5
Dorsal peduncular cortex	contra	DP	1.5
Dorsal peduncular cortex layer 5	contra	DPL5	1
Dorsal peduncular cortex layer 6	contra	DPL6	0.5
Prefrontal cortex layer 5	contra	PFCL5	1.5
Rostromedial border of the lateral agranular prefrontal cortex	contra	AGlrm	0.5
Medial agranular prefrontal cortex	contra	AGm	1
Medial agranular prefrontal cortex layer 5	contra	AGmL5	2
Medial agranular prefrontal cortex rostral part	contra	rAGm	1
Medial agranular prefrontal cortex rostralmost part	contra	rmAGm	1.5
Primary somatosensory cortex	contra	S1	0
Secondary somatosensory cortex	contra	S2	0
Locus coeruleus	ipsi	LC	-2
Pontine reticular nucleus	ipsi	PRN	1
Parabrachial nucleus medial	ipsi	PBnMe	-2
Gigantocellular reticular nucleus	ipsi	Gi	1
Parvicellular reticular nucleus	ipsi	PCRt	-0.5
Principal sensory trigeminal nucleus	ipsi	Pr5	1
Spinal trigeminal nucleus oral part	ipsi	Sp5O	1
Spinomedullary junction	ipsi	SMJ	2
Substantia innominata	ipsi	SI	-0.5
Preoptic region	ipsi	PREO	-0.5
Lateral zone	ipsi	LHA	-0.5
Lateral hypothalamic area	ipsi	LH	1
Lateral hypothalamic area perifornical part	ipsi	PFx	1
Posterior tuberal lateral hypothalamus	ipsi	PTuLH	-0.5
Dorsomedial hypothalamic nucleus [Medial zone]	ipsi	DM	1
Arcuate nucleus	ipsi	Arc	-0.5
Paraventricular hypothalamic nucleus	ipsi	Pa	-0.5
Bed nucleus of the stria terminalis	ipsi	BST	-0.5
Central amygdaloid nucleus	ipsi	Ce	3
Central amygdaloid nucleus lateral division	ipsi	CeL	1
Interstitial nucleus of the posterior limb of the anterior commissure medial part	ipsi	IPACM	1
Medial amygdaloid nucleus	ipsi	Me	1
Claustrum	ipsi	Cl	-0.5
Ventral pallidum	ipsi	VP	-0.5
Accumbens nucleus shell	ipsi	AcbSh	-0.5
Anterior cingulate cortex	ipsi	ACC	2
Anterior cingulate cortex layer 5	ipsi	ACCL5	2
Prelimbic cortex	ipsi	PrL	3
Prelimbic cortex rostral part	ipsi	PrLr	2
Prelimbic cortex rostral part layer 5	ipsi	PrLrL5	2
Infralimbic cortex	ipsi	IL	3
Infralimbic cortex layer 5	ipsi	ILL5	2
Insular cortex	ipsi	ICX	3
Agranular insular cortex	ipsi	AI	2
Agranular insular cortex layer 5	ipsi	AIL5	2
Rostromedial part of the lateral agranular insular cortex lateral part	ipsi	AiLarm	0.5
Dysgranular insular cortex	ipsi	DI	3
Dysgranular insular cortex layer 5	ipsi	DIL5	3
Granular insular cortex	ipsi	GI	1
Granular insular cortex layer 5	ipsi	GIL5	1
Insular cortex caudal part	ipsi	ICXca	4
Insular cortex layer 5	ipsi	ICXL5	2
Insular cortex layer 6	ipsi	ICXL6	1
Insular cortex rostral part	ipsi	ICXR	4
Dorsal peduncular cortex	ipsi	DP	4
Dorsal peduncular cortex layer 5	ipsi	DPL5	2
Dorsal peduncular cortex layer 6	ipsi	DPL6	1
Prefrontal cortex layer 5	ipsi	PFCL5	3
Rostromedial border of the lateral agranular prefrontal cortex	ipsi	AGlrm	0.5
Medial agranular prefrontal cortex	ipsi	AGm	3
Medial agranular prefrontal cortex layer 5	ipsi	AGmL5	4
Medial agranular prefrontal cortex rostral part	ipsi	rAGm	2
Medial agranular prefrontal cortex rostralmost part	ipsi	rmAGm	2
Primary somatosensory cortex	ipsi	S1	0
Secondary somatosensory cortex	ipsi	S2	0
Masseteric nerve	contra	mass	0
Anterior ethmoidal nerve	ipsi	aemn	-0.5
Mandibulary nerve	ipsi	5V3	-0.5
Masseteric nerve	ipsi	mass	3
Inferior alveolar nerve	ipsi	ialv	-2
Jaw muscle spindles	ipsi	MuscJawS	-0.5
Muscle spindles of the masseter muscle	ipsi	MuscMassSpi	-0.5

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong