University of Rostock
Department of Anatomy
Neuroscience Group
Homepage
Staff
neuroVIISAS
Rat connectome
Other connectomes
Neuroimaging
Neurodegeneration
Neuroproteomics
Students
Links
Publications
Rat connectome
Cervical segment 1 left
Abbreviation
CS1
Color
Superior regions
Prebrachial segments
Synonyms
Abbr.
Language
Cervical segment 1
CS1
Eng
Subregions
Side
Central cervical nucleus C1
left
Dorsal nucleus C1
left
Extra spinal segmental structures C1
left
Intermediolateral cell column C1
left
Intermediomedial cell column C1
left
Internal basilar nucleus C1
left
Lateral cervical nucleus C1
left
Lateral spinal nucleus C1
left
Nucleus of dorsolateral funiculus C1
left
Spinal cord layers C1
left
Transition zone between caudal and rostral part of C1 dorsal horn
left
Cervical segment 1 medial column
left
Cervical sympathetic trunc
left
Output to
Name
Side
Abbr.
Weight
Details
Central gray
ipsi
CG
3
Periaqueductal gray dorsal part
ipsi
PAGd
0.5
Periaqueductal gray laterodorsal part
ipsi
PAGLD
0.5
Periaqueductal gray medial part
ipsi
PAGm
0.5
Prerubral field
ipsi
PR
-3
Superior colliculus superficial layers
ipsi
SCs
0
Tegmental area
ipsi
TGA
3
Paravermis area
ipsi
CERCPA
-0.5
Copula of the pyramis
ipsi
Cop
-0.5
Copula of the pyramis zebrin positive band P+ 4
ipsi
CopZP+4
-0.5
Copula of the pyramis zebrin positive band P+ 5
ipsi
CopZP+5
-0.5
Copula of the pyramis zebrin positive band P+ 6
ipsi
CopZP+6
-0.5
Copula of the pyramis zebrin positive band P+ 7
ipsi
CopZP+7
-0.5
Vermis
ipsi
VERM
-0.5
Cerebellar lobule 2
ipsi
CERL2
3
Cerebellar lobule 2 zebrin positive band P+ 1
ipsi
CERL2P+1
1
Cerebellar lobule 2 zebrin positive band P+ 2
ipsi
CERL2P+2
-0.5
Cerebellar lobule 2 zebrin positive band P+ 3
ipsi
CERL2P+3
1
Cerebellar lobule 2 zebrin positive band P+ 4
ipsi
CERL2P+4
1
Cerebellar lobule 2a zone A
ipsi
CERL2aA
-0.5
Cerebellar lobule 2a zone B
ipsi
CERL2aB
-0.5
Cerebellar lobule 2a zone C1
ipsi
CERL2aC1
-0.5
Cerebellar lobule 2b zone A
ipsi
CERL2bA
-0.5
Cerebellar lobule 2b zone B
ipsi
CERL2bB
-0.5
Cerebellar lobule 2b zone C1
ipsi
CERL2bC1
-0.5
Cerebellar lobule 3
ipsi
CERL3
3
Cerebellar lobule 3a zone A
ipsi
CERL3aA
-0.5
Cerebellar lobule 3a zone B
ipsi
CERL3aB
-0.5
Cerebellar lobule 3b zone A
ipsi
CERL3bA
-0.5
Cerebellar lobule 3b zone B
ipsi
CERL3bB
-0.5
Cerebellar lobule 3 zebrin positive band P+ 1
ipsi
CERL3P+1
1
Cerebellar lobule 3 zebrin positive band P+ 2
ipsi
CERL3P+2
1
Cerebellar lobule 3 zebrin positive band P+ 3
ipsi
CERL3P+3
1
Cerebellar lobule 3 zebrin positive band P+ 4
ipsi
CERL3P+4
1
Cerebellar lobule 1
ipsi
CERL1
3
Cerebellar lobule 1 zone A
ipsi
CERL1A
1
Cerebellar lobule 1 zone B
ipsi
CERL1B
-0.5
Cerebellar lobule 1 zone C1
ipsi
CERL1C1
-0.5
Cerebellar lobule 1 zebrin positve band P+ 2
ipsi
CERL1P+2
1
Cerebellar lobule 1 zebrin positve band P+ 3
ipsi
CERL1P+3
1
Cerebellar lobule 4
ipsi
CERL4
2
Cerebellar lobule 4 zone A
ipsi
CERL4A
-0.5
Cerebellar lobule 4 zone B
ipsi
CERL4B
-0.5
Cerebellar lobule 4 zebrin positive band P+ 1
ipsi
CERL4P+1
1
Cerebellar lobule 4 zebrin positive band P+ 2
ipsi
CERL4P+2
1
Cerebellar lobule 4 zebrin positive band P+ 3
ipsi
CERL4P+3
1
Cerebellar lobule 4 zebrin positive band P+ 4
ipsi
CERL4P+4
1
Cerebellar lobule 5
ipsi
CERL5
2
Cerebellar lobule 5 zone A
ipsi
CERL5A
-0.5
Cerebellar lobule 5 zone B
ipsi
CERL5B
-0.5
Cerebellar lobule 7
ipsi
CERL7
-0.5
Cerebellar lobule 7a zone A
ipsi
CERL7aA
-0.5
Cerebellar lobule 7a zone B
ipsi
CERL7aB
-0.5
Cerebellar lobule 7b zone A
ipsi
CERL7bA
-0.5
Cerebellar lobule 7b zone B
ipsi
CERL7bB
-0.5
Cerebellar lobule 8
ipsi
CERL8
2
Cerebellar lobule 8 zebrin positive band P+ 1
ipsi
CERL8P+1
-0.5
Cerebellar lobule 8 zebrin positive band P+ 2
ipsi
CERL8P+2
1
Cerebellar lobule 8 zebrin positive band P+ 3
ipsi
CERL8P+3
1
Cerebellar lobule 8 zone A
ipsi
CERL8A
-0.5
Cerebellar lobule 8 zone B
ipsi
CERL8B
-0.5
Cerebellar lobule 9
ipsi
CERL9
-0.5
Cerebellar lobule 9 zebrin positive band P+ 1
ipsi
CERL9P+1
1
Cerebellar lobule 9 zebrin positive band P+ 2
ipsi
CERL9P+2
1
Cerebellar lobule 9a zones
ipsi
CERL9aZ
-0.5
Cerebellar lobule 9a zone A
ipsi
CERL9aA
-0.5
Cerebellar lobule 9a zone B
ipsi
CERL9aB
-0.5
Cerebellar lobule 9b zone A
ipsi
CERL9bA
-0.5
Cerebellar lobule 9b zone B
ipsi
CERL9bB
-0.5
Cerebellar lobule 9c zone A
ipsi
CERL9cA
-0.5
Cerebellar lobule 9c zone B
ipsi
CERL9cB
-0.5
Cerebellar lobule 10b zone A
ipsi
CERL10bA
-0.5
Cerebellar lobule 10b zone B
ipsi
CERL10bB
-0.5
Cerebellar lobule 10a zone A
ipsi
CERL10aA
-0.5
Cerebellar lobule 10a zone B
ipsi
CERL10aB
-0.5
Cerebellar lobule 6
ipsi
CERL6
-0.5
Cerebellar lobule 6a zone A
ipsi
CERL6aA
-0.5
Cerebellar lobule 6a zone B
ipsi
CERL6aB
-0.5
Cerebellar lobule 6b zone A
ipsi
CERL6bA
-0.5
Cerebellar lobule 6b zone B
ipsi
CERL6bB
-0.5
Cerebellar lobule 6c zone A
ipsi
CERL6cA
-0.5
Cerebellar lobule 6c zone B
ipsi
CERL6cB
-0.5
Cerebellar lobule 6d zone A
ipsi
CERL6dA
-0.5
Cerebellar lobule 6d zone B
ipsi
CERL6dB
-0.5
Ventral reticular formation
ipsi
VRF
-1
Ventrolateral pontine reticular formation
ipsi
vlPRF
0.5
Cuneiforme nucleus
ipsi
CnF
3
Lateral reticular nucleus
ipsi
LRt
-0.5
Caudal part to the midportion of the lateral reticular nucleus
ipsi
CaLRtMp
-0.5
Caudal third of the caudomedial part of the lateral reticular nucleus
ipsi
LRtcmCt
-0.5
Lateral reticular nucleus lateral part
ipsi
LRtL
-0.5
Lateral reticular nucleus magnocellular part
ipsi
LRtMC
3
Lateral reticular nucleus parvicellular part
ipsi
LRtPC
3
Lateral reticular nucleus rostral part
ipsi
LRtr
-0.5
Lateral reticular nucleus subtrigeminal part
ipsi
LRtS5
0
Parvicellular reticular nucleus
ipsi
PCRt
2
Spinal trigeminal nucleus
ipsi
Sp5nc
1
Spinal trigeminal nucleus caudal part deep layers
ipsi
Sp5CadL
3
Caudal half of border region of the spinal trigeminal nucleus interpolar part
ipsi
Sp5CIb
2
Rostrocaudal extent of the border-region of the spinal trigeminal nucleus interpolar part
ipsi
Sp5Ibrc
3
Spinal trigeminal nucleus interpolar part dorsolateral
ipsi
Sp5IdL
4
Rostrocaudal extent of the dorsolateral interpolar spinal trigeminal nucleus
ipsi
Sp5IdLRC
3
Spinal trigeminal nucleus interpolar part rostral
ipsi
Sp5Ir
0.5
Spinal trigeminal nucleus interpolar part ventrolateral part
ipsi
Sp5IVL
1
Caudal part of spinal trigeminal nucleus oral part
ipsi
Sp5Oc
0.5
Rostral non-laminated part of the trigeminal subnucleus caudalis
ipsi
5SSCro
0.5
Trigeminal subnucleus caudalis layers
ipsi
5SSCL
4
Medial vestibular nucleus
ipsi
MVe
3
Cuneate nucleus lateral part
ipsi
CuLa
2
Lateral hypothalamic area
ipsi
LH
2
Medial division of the hypothalamus
ipsi
MdH
2
Anteromedial thalamic nucleus
ipsi
AM
-3
Centrolateral thalamic nucleus
ipsi
CL
-0.5
Paracentral thalamic nucleus
ipsi
PC
-3
Rhomboid thalamic nucleus
ipsi
Rh
-3
Submedius thalamic nucleus
ipsi
Sub
1.5
Reuniens thalamic nucleus
ipsi
Re
-3
Reuniens thalamic nucleus ventral part
ipsi
ReV
-3
Ventrolateral thalamic nucleus
ipsi
VL
-3
Ventrobasal complex
ipsi
VB
-0.5
Ventromedial thalamic nucleus
ipsi
VM
-3
Posterior group
ipsi
PTG
-0.5
Ventral medial nucleus of the thalamus
ipsi
VMT
-3
Zona incerta
ipsi
ZI
1
Lumbar segment 2
ipsi
L2
2
Central gray
contra
CG
1
Central gray medial part
contra
CGMe
-0.5
Periaqueductal gray dorsal part
contra
PAGd
1
Periaqueductal gray laterodorsal part
contra
PAGLD
1
Periaqueductal gray medial part
contra
PAGm
1
Caudal part of inferior colliculus
contra
ICOLC
-0.5
Superior colliculus superficial layers
contra
SCs
0
Tegmental area
contra
TGA
1
Cerebellar lobule 2
contra
CERL2
2
Cerebellar lobule 3
contra
CERL3
-0.5
Cerebellar lobule 4
contra
CERL4
-0.5
Cerebellar lobule 5
contra
CERL5
-0.5
Cerebellar lobule 8
contra
CERL8
2
Cerebellar lobule 9
contra
CERL9
-0.5
Ventral reticular formation
contra
VRF
-1
Ventrolateral pontine reticular formation
contra
vlPRF
0
Cuneiforme nucleus
contra
CnF
1
Caudal part to the midportion of the lateral reticular nucleus
contra
CaLRtMp
-0.5
Caudal third of the caudomedial part of the lateral reticular nucleus
contra
LRtcmCt
-0.5
Lateral reticular nucleus lateral part
contra
LRtL
-0.5
Lateral reticular nucleus magnocellular part
contra
LRtMC
0.5
Lateral reticular nucleus rostral part
contra
LRtr
-0.5
Ventral respiratory group
contra
VReG
1
Cuneate nucleus ventral part
contra
CuV
2
Gracile ventral part
contra
GrV
2
Inferior olive dorsal nucleus
contra
IOD
2
Lateral hypothalamic area
contra
LH
3
Medial division of the hypothalamus
contra
MdH
3
Anterior group of the dorsal thalamus
contra
ATN
4
Central medial thalamic nucleus
contra
CM
4
Centrolateral thalamic nucleus
contra
CL
4
Paracentral thalamic nucleus
contra
PC
4
Parafascicular thalamic nucleus
contra
PF
4
Rhomboid thalamic nucleus
contra
Rh
4
Posterior thalamic nuclear group
contra
Po
4
Mediodorsal thalamic nucleus
contra
MD
4
Submedius thalamic nucleus
contra
Sub
4
Paratenial thalamic nucleus
contra
PT
4
Paraventricular thalamic nucleus
contra
PV
4
Reuniens thalamic nucleus
contra
Re
4
Ventrobasal complex
contra
VB
4
Laterodorsal thalamic nucleus
contra
LD
4
Posterior group
contra
PTG
-0.5
Reticular thalamic nucleus
contra
Rt
4
Zona incerta
contra
ZI
4
Habenula
contra
HAB
4
Lateral geniculate complex
contra
LG
4
Medial geniculate nucleus
contra
MG
4
Lumbar segment 2
contra
L2
2
Superior cervical ganglion
ipsi
AutoSCeG
-0.5
Pericardium
ipsi
OrgsPeric
-0.5
Bulbocavernosus muscle
ipsi
MuscBCV
-10
Ischiocavernosus muscle
ipsi
Muscicav
-10
Thyrohyoid muscle
ipsi
Muscthyro
2
Trapezius muscle
ipsi
MuscTrap
2
Input from
Name
Side
Abbr.
Weight
Details
Adventitia of the middle meningeal artery
ipsi
mimea
3
Caudal midbrain
ipsi
cMEC
-0.5
Central gray
ipsi
CG
0.5
Paralemniscal nucleus
ipsi
PL
1
Nucleus of Darkschewitsch
ipsi
Dk
2
Periaqueductal gray
ipsi
PAG
1
Lateral pontine tegmentum
ipsi
LPTG
3
Red nucleus
ipsi
R
3
Red nucleus caudal part
ipsi
RnCa
-0.5
Dorsomedial portion of the red nucleus caudal part
ipsi
RnCaDm
-0.5
Red nucleus intermediary part
ipsi
RiM
-0.5
Red nucleus ventral part
ipsi
RV
-0.5
Superior colliculus intermediate layers
ipsi
SCi
3
Superior colliculus deep layers
ipsi
SCd
1
Deep gray layer of the superior colliculus
ipsi
DpG
-0.5
Central tegmental field
ipsi
TGAC
3
Substantia nigra A9
ipsi
SN
0
Ventromedial mesencephalic tegmentum
ipsi
VMTg
3
Laterodorsal tegmental nucleus
ipsi
LDTg
2
Bulbar tegmentum
ipsi
BuTe
3
Gigantocellular tegmental field
ipsi
GiCTeF
2
Parvocellular tegmental field
ipsi
PaTeF
3
Ventral tegmental nucleus
ipsi
VTg
-0.5
Pedunculopontine tegmental nucleus
ipsi
PPTg
3
Edinger Westphal nucleus
ipsi
EW
1
Interstitial nucleus of Cajal
ipsi
InC
3
Deep cerebellar nuclei
ipsi
DNC
-0.5
Interposed cerebellar nuclei
ipsi
ICN
2
Posterior interposed nucleus
ipsi
CERpin
1
Lateral cerebellar nucleus
ipsi
CERL
1
Medial cerebellar nucleus
ipsi
Med
3
Dorsolateral protuberance
ipsi
DLPr
1
Medial cerebellar nucleus medial part
ipsi
MedM
3
A5 noradrenaline cells
ipsi
A5
2
A7 noradrenaline cells
ipsi
A7
-0.5
Locus coeruleus
ipsi
LC
3
Locus coeruleus ventral part
ipsi
LCv
-0.5
Pontine nuclei caudal part
ipsi
BPNc
-0.5
Pontine nucleus oralis
ipsi
PnOr
-0.5
Prepositus nucleus
ipsi
Pr
0.5
Reticular system
ipsi
RF
-0.5
Intermediate reticular nucleus
ipsi
IRt
3
Medial reticular formation
ipsi
RFm
2
Paramedian reticular nucleus
ipsi
PMn
0.5
Ventrolateral reticular formation
ipsi
VLRF
1
Mesencephalic reticular formation
ipsi
MRF
3
Pontine reticular nucleus
ipsi
PRN
2
Pontine reticular nucleus oral part
ipsi
PnO
3
Pontine reticular nucleus ventral part
ipsi
PnV
1
Ventrolateral pontine reticular formation
ipsi
vlPRF
0.5
Pontine reticular nucleus caudal part
ipsi
PNC
3
Cuneiforme nucleus
ipsi
CnF
3
Parabrachial nucleus
ipsi
PB
1
Koelliker Fuse nucleus
ipsi
KF
1
Bulbar reticular formation
ipsi
BRF
3
Gigantocellular reticular nucleus
ipsi
Gi
4
Gigantocellular reticular nucleus alpha part
ipsi
GiA
2
Gigantocellular reticular nucleus central part
ipsi
GiCe
3
Gigantocellular reticular nucleus ventral part
ipsi
GiV
3
Lateral reticular nucleus
ipsi
LRt
3
Medullary reticular nucleus
ipsi
MdD
1
Medial subnucleus reticularis ventralis
ipsi
MSRV
-0.5
Medial subnucleus reticularis ventralis dorsal part
ipsi
MSRVd
-0.5
Medial subnucleus reticularis ventralis ventral part
ipsi
MSRVv
-0.5
Parvicellular reticular nucleus
ipsi
PCRt
3
Subcoeruleus nucleus
ipsi
SubC
3
Hypoglossal nucleus
ipsi
12S
1
Mesencephalic trigeminal nucleus
ipsi
Me5
0.5
Mesencephalic trigeminal nucleus ventral part
ipsi
Me5V
1
Principal sensory trigeminal nucleus
ipsi
Pr5
-0.5
Spinal trigeminal nucleus
ipsi
Sp5nc
-0.5
Spinal trigeminal nucleus caudal part
ipsi
Sp5C
3
Spinal trigeminal nucleus caudal part magnocellular layer
ipsi
Sp5CmL
-0.5
Spinal trigeminal nucleus interpolar part
ipsi
Sp5I
3
Spinal trigeminal nucleus interpolar part dorsolateral
ipsi
Sp5IdL
3
Caudal dorsolateral spinal trigeminal nucleus interpolar part
ipsi
Sp5ICdL
1
Spinal trigeminal nucleus interpolar part ventrolateral part
ipsi
Sp5IVL
3
Spinal trigeminal nucleus oral part
ipsi
Sp5O
4
Ventrolateral part of spinal trigeminal nucleus oral part
ipsi
Sp5OVL
3
Nucleus intertrigeminalis
ipsi
iN5
1
Maxillary region of the trigeminal ganglion
ipsi
5GnV2
1
Ophthalmic region of the trigeminal ganglion
ipsi
5GnV1
1
Spinal vestibular nucleus
ipsi
SpVe
2
Vestibular nuclei
ipsi
Vnc
3
Superior vestibular nucleus
ipsi
SuVe
3
Medial vestibular nucleus
ipsi
MVe
3
Lateral vestibular nucleus
ipsi
LVe
2
Lateral vestibular nucleus dorsal part
ipsi
LVeD
3
Lateral vestibular nucleus ventral part
ipsi
LVeV
3
Inferior vestibular nucleus
ipsi
IVN
3
Nucleus intercalatus
ipsi
Nic
2
Nucleus of the solitary tract
ipsi
Sol
-0.5
Nucleus of the solitary tract lateral part
ipsi
SolL
-0.5
Nucleus of the solitary tract medial part
ipsi
SolM
-0.5
Dorsal motor nucleus of vagus
ipsi
10
1
Raphe nuclei
ipsi
RAN
3
Dorsal raphe nucleus
ipsi
DR
1
Pontine raphe nucleus
ipsi
PnR
-0.5
Raphe magnus nucleus
ipsi
RMg
3
Raphe magnus nucleus caudal part
ipsi
RMgc
-0.5
Raphe obscurus nucleus
ipsi
ROb
3
Raphe pallidus nucleus
ipsi
RPa
3
Cuneate nucleus
ipsi
Cu
3
Gracile nucleus principal part
ipsi
Gr
2
Matrix region of the medulla
ipsi
Mx
1
Nucleus of Roller
ipsi
Ro
-0.5
Periolivary area
ipsi
POA
1
Dorsal paragigantocellular nucleus
ipsi
DPGi
1
Lateral paragigantocellular nucleus
ipsi
LPGi
1
Lateral part of the lateral paragigantocellular nucleus
ipsi
LLPGi
0.5
Ventral surface of the medulla oblongata
ipsi
VSMeO
-0.5
Marginal surface of the ventral surface of the medulla oblongata
ipsi
msVSMeO
-0.5
Diagonal band of Broca
ipsi
DBB
0
Nucleus of the horizontal limb of the diagonal band
ipsi
HDB
0
Nucleus of the vertical limb of the diagonal band
ipsi
VDB
0
Medial septal nucleus
ipsi
MS
0
Basal nucleus Meynert
ipsi
B
0
Magnocellular preoptic nucleus
ipsi
MCPO
0
Tuberomammillary nucleus
ipsi
TuM
2
Juxtaparaventricular part [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPV
-0.5
Lateral hypothalamic area
ipsi
LH
1
Dorsolateral hypothalamus
ipsi
DLH
2
Dorsolateral hypothalamus around the fornix
ipsi
DLHf
2
Posterior hypothalamic area
ipsi
PHA
1
Ventromedial hypothalamic nucleus
ipsi
VMH
1
Paraventricular hypothalamic nucleus caudal part
ipsi
PaPoC
3
Paraventricular hypothalamic nucleus magnocellular part [Periventricular zone anterior region]
ipsi
PaAM
0.5
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular part
ipsi
PaAMa
0
Paraventricular hypothalamic nucleus lateral parvocellular part
ipsi
LPPa
2
Paraventricular hypothalamic nucleus medial parvocellular part
ipsi
MPPa
3
Paraventricular hypothalamic nucleus dorsal part
ipsi
PaD
3
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]
ipsi
PaPo
3
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]
ipsi
PaV
-0.5
Paraventricular hypothalamic nucleus
ipsi
Pa
3
Paraventricular hypothalamic nucleus dorsomedial cap
ipsi
Padmc
3
Paraventricular hypothalamic nucleus magnocellular division posterior part
ipsi
PaMagP
3
Paraventricular hypothalamic nucleus dorsal parvocellular division
ipsi
PavPoD
2
Paraventricular hypothalamic nucleus periventricular part
ipsi
Papv
0.5
Dorsal edge of paraventricular nucleus medial part
ipsi
PameD
-0.5
Paraventricular nucleus medial part dorsomedial parvocellular area
ipsi
Pamedmp
-0.5
Rostral to the paraventricular hypothalamic nucleus medial part
ipsi
Pamejr
1
Periventricular hypothalamic nucleus
ipsi
Pe
3
Posterior periventricular nucleus
ipsi
PeP
0.5
Ventral hypothalamic region
ipsi
VHR
1
Lateral mammillary nucleus
ipsi
LM
0.5
Medial mammillary nucleus lateral part
ipsi
ML
0.5
Premammillary nucleus ventral part
ipsi
PMV
0.5
Retrochiasmatic area
ipsi
RCh
-0.5
Medial paraventricular thalamic nucleus proper
ipsi
PVMp
0
Paraventricular thalamic nucleus ventromedial to the medial lateral transition zone
ipsi
PVmLvm
3
Subparafascicular thalamic nucleus
ipsi
SPF
3
Nucleus of the fields of Forel
ipsi
F
-1
Zona incerta medial part
ipsi
ZIm
1
Medial part of crus cerebri
ipsi
cpme
2
Caudate putamen
ipsi
CPu
0
Hippocampus
ipsi
HIPP
0
Piriform cortex
ipsi
Pir
0
Cerebral cortex layer 5
ipsi
CCL5
4
Cingulate cortex
ipsi
Cg
0
Frontal association cortex layer 5
ipsi
FrALL5
-0.5
Frontal association cortex posterior part layer 5
ipsi
FrApL5
-0.5
Frontal association cortex posterior part layer 5b
ipsi
FrApL5b
-0.5
Parietal cortex posterior area dorsal part layer 5
ipsi
ParPDL5
1
Parietal association cortex layer 5
ipsi
ParPLa5
-0.5
Parietal cortex area 1 layer 5
ipsi
Par1L5
1
Parietal association cortex anterior area layer 5b
ipsi
PtAAL5b
-0.5
Prefrontal cortex layer 5
ipsi
PFCL5
1
Lateral agranular prefrontal cortex layer 5
ipsi
AGlL5
1
Primary somatosensory cortex layer 5
ipsi
S1L5
1
Secondary somatosensory cortex
ipsi
S2
-0.5
Secondary somatosensory cortex layer 5
ipsi
S2L5
1
Visual regions
ipsi
VR
0
Nucleus of the posterior commissure
ipsi
PCom
1
Olfactory cortex
ipsi
Ocx
0
Paracommissural nucleus of the posterior commissure
ipsi
PaC
1
Lateral spinal nucleus C1
ipsi
LSpC1
-0.5
Spinal cord layer 5 C1
ipsi
SCL5C1
3
Spinal cord layer 6 C1
ipsi
SCL6C1
3
Spinal cord layer 3 C1
ipsi
SCL3C1
1
Spinal cord layer 4 C1
ipsi
SCL4C1
3
Spinal cord layer 1 C1
ipsi
SCL1C1
1
Spinal cord layer 2 C1
ipsi
SCL2C1
1
Spinal cord layer 7 C1
ipsi
SCL7C1
3
Spinal cord layer 8 C1
ipsi
SCL8C1
2
Lateral spinal nucleus C2
ipsi
LSpC2
-0.5
Spinal cord layer 5 C2
ipsi
SCL5C2
3
Spinal cord layer 6 C2
ipsi
SCL6C2
3
Spinal cord layer 3 C2
ipsi
SCL3C2
1
Spinal cord layer 4 C2
ipsi
SCL4C2
3
Spinal cord layer 1 C2
ipsi
SCL1C2
1
Spinal cord layer 2 C2
ipsi
SCL2C2
1
Spinal cord layer 7 C2
ipsi
SCL7C2
3
Spinal cord layer 8 C2
ipsi
SCL8C2
2
Lateral spinal nucleus C3
ipsi
LSpC3
-0.5
Spinal cord layer 5 C3
ipsi
SCL5C3
3
Spinal cord layer 6 C3
ipsi
SCL6C3
3
Spinal cord layer 3 C3
ipsi
SCL3C3
3
Spinal cord layer 4 C3
ipsi
SCL4C3
3
Spinal cord layer 1 C3
ipsi
SCL1C3
3
Spinal cord layer 2 C3
ipsi
SCL2C3
3
Spinal cord layer 7 C3
ipsi
SCL7C3
3
Spinal cord layer 8 C3
ipsi
SCL8C3
3
Lateral spinal nucleus C4
ipsi
LSpC4
-0.5
Spinal cord layer 5 C4
ipsi
SCL5C4
3
Spinal cord layer 6 C4
ipsi
SCL6C4
3
Spinal cord layer 3 C4
ipsi
SCL3C4
3
Spinal cord layer 4 C4
ipsi
SCL4C4
3
Spinal cord layer 1 C4
ipsi
SCL1C4
3
Spinal cord layer 2 C4
ipsi
SCL2C4
3
Spinal cord layer 7 C4
ipsi
SCL7C4
3
Spinal cord layer 8 C4
ipsi
SCL8C4
3
Lateral spinal nucleus C5
ipsi
LSpC5
-0.5
Spinal cord layer 5 C5
ipsi
SCL5C5
3
Spinal cord layer 6 C5
ipsi
SCL6C5
3
Spinal cord layer 3 C5
ipsi
SCL3C5
3
Spinal cord layer 4 C5
ipsi
SCL4C5
3
Spinal cord layer 1 C5
ipsi
SCL1C5
3
Spinal cord layer 2 C5
ipsi
SCL2C5
3
Spinal cord layer 7 C5
ipsi
SCL7C5
3
Spinal cord layer 8 C5
ipsi
SCL8C5
3
Lateral spinal nucleus C6
ipsi
LSpC6
-0.5
Area X C6
ipsi
SCL10C6
3
Spinal cord layer 5 C6
ipsi
SCL5C6
3
Spinal cord layer 6 C6
ipsi
SCL6C6
3
Spinal cord layer 3 C6
ipsi
SCL3C6
3
Spinal cord layer 4 C6
ipsi
SCL4C6
3
Spinal cord layer 1 C6
ipsi
SCL1C6
3
Spinal cord layer 2 C6
ipsi
SCL2C6
3
Ventral horn C6
ipsi
VHC6
-0.5
Spinal cord layer 7 C6
ipsi
SCL7C6
3
Spinal cord layer 8 C6
ipsi
SCL8C6
3
Lateral spinal nucleus C7
ipsi
LSpC7
-0.5
Spinal cord layer 5 C7
ipsi
SCL5C7
3
Spinal cord layer 6 C7
ipsi
SCL6C7
3
Spinal cord layer 3 C7
ipsi
SCL3C7
3
Spinal cord layer 4 C7
ipsi
SCL4C7
3
Spinal cord layer 1 C7
ipsi
SCL1C7
3
Spinal cord layer 2 C7
ipsi
SCL2C7
3
Spinal cord layer 7 C7
ipsi
SCL7C7
3
Spinal cord layer 8 C7
ipsi
SCL8C7
3
Lateral spinal nucleus C8
ipsi
LSpC8
-0.5
Spinal cord layer 5 C8
ipsi
SCL5C8
3
Spinal cord layer 6 C8
ipsi
SCL6C8
3
Spinal cord layer 3 C8
ipsi
SCL3C8
3
Spinal cord layer 4 C8
ipsi
SCL4C8
3
Spinal cord layer 1 C8
ipsi
SCL1C8
3
Spinal cord layer 2 C8
ipsi
SCL2C8
3
Spinal cord layer 7 C8
ipsi
SCL7C8
3
Spinal cord layer 8 C8
ipsi
SCL8C8
3
Lateral spinal nucleus T1
ipsi
LSpT1
-0.5
Spinal cord layer 5 T1
ipsi
SCL5T1
3
Spinal cord layer 6 T1
ipsi
SCL6T1
3
Spinal cord layer 3 T1
ipsi
SCL3T1
1
Spinal cord layer 4 T1
ipsi
SCL4T1
3
Spinal cord layer 1 T1
ipsi
SCL1T1
1
Spinal cord layer 2 T1
ipsi
SCL2T1
1
Spinal cord layer 7 T1
ipsi
SCL7T1
3
Spinal cord layer 8 T1
ipsi
SCL8T1
2
Spinal cord layer 5 T2
ipsi
SCL5T2
3
Spinal cord layer 6 T2
ipsi
SCL6T2
3
Spinal cord layer 3 T2
ipsi
SCL3T2
1
Spinal cord layer 4 T2
ipsi
SCL4T2
3
Spinal cord layer 1 T2
ipsi
SCL1T2
1
Spinal cord layer 2 T2
ipsi
SCL2T2
1
Spinal cord layer 7 T2
ipsi
SCL7T2
3
Spinal cord layer 8 T2
ipsi
SCL8T2
2
Spinal cord layer 5 T3
ipsi
SCL5T3
3
Spinal cord layer 6 T3
ipsi
SCL6T3
3
Spinal cord layer 3 T3
ipsi
SCL3T3
1
Spinal cord layer 4 T3
ipsi
SCL4T3
3
Spinal cord layer 1 T3
ipsi
SCL1T3
1
Spinal cord layer 2 T3
ipsi
SCL2T3
1
Spinal cord layer 7 T3
ipsi
SCL7T3
3
Spinal cord layer 8 T3
ipsi
SCL8T3
2
Spinal cord layer 5 T4
ipsi
SCL5T4
3
Spinal cord layer 6 T4
ipsi
SCL6T4
3
Spinal cord layer 3 T4
ipsi
SCL3T4
1
Spinal cord layer 4 T4
ipsi
SCL4T4
3
Spinal cord layer 1 T4
ipsi
SCL1T4
1
Spinal cord layer 2 T4
ipsi
SCL2T4
1
Spinal cord layer 7 T4
ipsi
SCL7T4
3
Spinal cord layer 8 T4
ipsi
SCL8T4
2
Spinal cord layer 5 T5
ipsi
SCL5T5
3
Spinal cord layer 6 T5
ipsi
SCL6T5
3
Spinal cord layer 3 T5
ipsi
SCL3T5
1
Spinal cord layer 4 T5
ipsi
SCL4T5
3
Spinal cord layer 1 T5
ipsi
SCL1T5
1
Spinal cord layer 2 T5
ipsi
SCL2T5
1
Spinal cord layer 7 T5
ipsi
SCL7T5
3
Spinal cord layer 8 T5
ipsi
SCL8T5
2
Spinal cord layer 5 T6
ipsi
SCL5T6
3
Spinal cord layer 6 T6
ipsi
SCL6T6
3
Spinal cord layer 3 T6
ipsi
SCL3T6
1
Spinal cord layer 4 T6
ipsi
SCL4T6
3
Spinal cord layer 1 T6
ipsi
SCL1T6
1
Spinal cord layer 2 T6
ipsi
SCL2T6
1
Spinal cord layer 7 T6
ipsi
SCL7T6
3
Spinal cord layer 8 T6
ipsi
SCL8T6
2
Spinal cord layer 5 T7
ipsi
SCL5T7
3
Spinal cord layer 6 T7
ipsi
SCL6T7
3
Spinal cord layer 3 T7
ipsi
SCL3T7
1
Spinal cord layer 4 T7
ipsi
SCL4T7
3
Spinal cord layer 1 T7
ipsi
SCL1T7
1
Spinal cord layer 2 T7
ipsi
SCL2T7
1
Spinal cord layer 7 T7
ipsi
SCL7T7
3
Spinal cord layer 8 T7
ipsi
SCL8T7
2
Spinal cord layer 5 T8
ipsi
SCL5T8
3
Spinal cord layer 6 T8
ipsi
SCL6T8
3
Spinal cord layer 3 T8
ipsi
SCL3T8
1
Spinal cord layer 4 T8
ipsi
SCL4T8
3
Spinal cord layer 1 T8
ipsi
SCL1T8
1
Spinal cord layer 2 T8
ipsi
SCL2T8
1
Spinal cord layer 7 T8
ipsi
SCL7T8
3
Spinal cord layer 8 T8
ipsi
SCL8T8
2
Spinal cord layer 5 T9
ipsi
SCL5T9
3
Spinal cord layer 6 T9
ipsi
SCL6T9
3
Spinal cord layer 3 T9
ipsi
SCL3T9
1
Spinal cord layer 4 T9
ipsi
SCL4T9
3
Spinal cord layer 1 T9
ipsi
SCL1T9
1
Spinal cord layer 2 T9
ipsi
SCL2T9
1
Spinal cord layer 7 T9
ipsi
SCL7T9
3
Spinal cord layer 8 T9
ipsi
SCL8T9
2
Spinal cord layer 5 T10
ipsi
SCL5T10
3
Spinal cord layer 6 T10
ipsi
SCL6T10
3
Spinal cord layer 3 T10
ipsi
SCL3T10
1
Spinal cord layer 4 T10
ipsi
SCL4T10
3
Spinal cord layer 1 T10
ipsi
SCL1T10
1
Spinal cord layer 2 T10
ipsi
SCL2T10
1
Spinal cord layer 7 T10
ipsi
SCL7T10
3
Spinal cord layer 8 T10
ipsi
SCL8T10
2
Spinal cord layer 5 T11
ipsi
SCL5T11
3
Spinal cord layer 6 T11
ipsi
SCL6T11
3
Spinal cord layer 3 T11
ipsi
SCL3T11
1
Spinal cord layer 4 T11
ipsi
SCL4T11
3
Spinal cord layer 1 T11
ipsi
SCL1T11
1
Spinal cord layer 2 T11
ipsi
SCL2T11
1
Spinal cord layer 7 T11
ipsi
SCL7T11
3
Spinal cord layer 8 T11
ipsi
SCL8T11
2
Area X T12
ipsi
SCL10T12
3
Spinal cord layer 5 T12
ipsi
SCL5T12
3
Spinal cord layer 6 T12
ipsi
SCL6T12
3
Spinal cord layer 3 T12
ipsi
SCL3T12
1
Spinal cord layer 4 T12
ipsi
SCL4T12
3
Spinal cord layer 1 T12
ipsi
SCL1T12
1
Spinal cord layer 2 T12
ipsi
SCL2T12
1
Spinal cord layer 7 T12
ipsi
SCL7T12
3
Spinal cord layer 8 T12
ipsi
SCL8T12
2
Spinal cord layer 5 T13
ipsi
SCL5T13
3
Spinal cord layer 6 T13
ipsi
SCL6T13
3
Spinal cord layer 3 T13
ipsi
SCL3T13
1
Spinal cord layer 4 T13
ipsi
SCL4T13
3
Spinal cord layer 1 T13
ipsi
SCL1T13
1
Spinal cord layer 2 T13
ipsi
SCL2T13
1
Spinal cord layer 7 T13
ipsi
SCL7T13
3
Spinal cord layer 8 T13
ipsi
SCL8T13
2
Spinal cord layer 5 L1
ipsi
SCL5L1
3
Spinal cord layer 6 L1
ipsi
SCL6L1
3
Spinal cord layer 3 L1
ipsi
SCL3L1
1
Spinal cord layer 4 L1
ipsi
SCL4L1
3
Spinal cord layer 1 L1
ipsi
SCL1L1
1
Spinal cord layer 2 L1
ipsi
SCL2L1
1
Spinal cord layer 7 L1
ipsi
SCL7L1
3
Spinal cord layer 8 L1
ipsi
SCL8L1
2
Spinal cord layer 5 L2
ipsi
SCL5L2
3
Spinal cord layer 6 L2
ipsi
SCL6L2
3
Spinal cord layer 3 L2
ipsi
SCL3L2
1
Spinal cord layer 4 L2
ipsi
SCL4L2
3
Spinal cord layer 1 L2
ipsi
SCL1L2
1
Spinal cord layer 2 L2
ipsi
SCL2L2
1
Spinal cord layer 7 L2
ipsi
SCL7L2
3
Spinal cord layer 8 L2
ipsi
SCL8L2
2
Spinal cord layer 5 L3
ipsi
SCL5L3
3
Spinal cord layer 6 L3
ipsi
SCL6L3
3
Spinal cord layer 3 L3
ipsi
SCL3L3
1
Spinal cord layer 4 L3
ipsi
SCL4L3
3
Spinal cord layer 1 L3
ipsi
SCL1L3
1
Spinal cord layer 2 L3
ipsi
SCL2L3
1
Spinal cord layer 7 L3
ipsi
SCL7L3
3
Spinal cord layer 8 L3
ipsi
SCL8L3
2
Area X L4
ipsi
SCL10L4
3
Spinal cord layer 5 L4
ipsi
SCL5L4
3
Spinal cord layer 6 L4
ipsi
SCL6L4
3
Spinal cord layer 3 L4
ipsi
SCL3L4
1
Spinal cord layer 4 L4
ipsi
SCL4L4
3
Spinal cord layer 1 L4
ipsi
SCL1L4
1
Spinal cord layer 2 L4
ipsi
SCL2L4
1
Spinal cord layer 7 L4
ipsi
SCL7L4
3
Spinal cord layer 8 L4
ipsi
SCL8L4
2
Spinal cord layer 5 L5
ipsi
SCL5L5
3
Spinal cord layer 6 L5
ipsi
SCL6L5
3
Spinal cord layer 3 L5
ipsi
SCL3L5
1
Spinal cord layer 4 L5
ipsi
SCL4L5
3
Spinal cord layer 1 L5
ipsi
SCL1L5
1
Spinal cord layer 2 L5
ipsi
SCL2L5
1
Spinal cord layer 7 L5
ipsi
SCL7L5
3
Spinal cord layer 8 L5
ipsi
SCL8L5
2
Spinal cord layer 5 L6
ipsi
SCL5L6
3
Spinal cord layer 6 L6
ipsi
SCL6L6
3
Spinal cord layer 3 L6
ipsi
SCL3L6
1
Spinal cord layer 4 L6
ipsi
SCL4L6
3
Spinal cord layer 1 L6
ipsi
SCL1L6
1
Spinal cord layer 2 L6
ipsi
SCL2L6
1
Spinal cord layer 7 L6
ipsi
SCL7L6
3
Spinal cord layer 8 L6
ipsi
SCL8L6
2
Spinal cord layer 5 S1
ipsi
SCL5S1
3
Spinal cord layer 6 S1
ipsi
SCL6S1
3
Spinal cord layer 3 S1
ipsi
SCL3S1
1
Spinal cord layer 4 S1
ipsi
SCL4S1
3
Spinal cord layer 1 S1
ipsi
SCL1S1
1
Spinal cord layer 2 S1
ipsi
SCL2S1
1
Spinal cord layer 7 S1
ipsi
SCL7S1
3
Spinal cord layer 8 S1
ipsi
SCL8S1
2
Spinal cord layer 5 S2
ipsi
SCL5S2
3
Spinal cord layer 6 S2
ipsi
SCL6S2
3
Spinal cord layer 3 S2
ipsi
SCL3S2
1
Spinal cord layer 4 S2
ipsi
SCL4S2
3
Spinal cord layer 1 S2
ipsi
SCL1S2
1
Spinal cord layer 2 S2
ipsi
SCL2S2
1
Spinal cord layer 7 S2
ipsi
SCL7S2
3
Spinal cord layer 8 S2
ipsi
SCL8S2
2
Spinal cord layer 5 S3
ipsi
SCL5S3
3
Spinal cord layer 6 S3
ipsi
SCL6S3
3
Spinal cord layer 3 S3
ipsi
SCL3S3
1
Spinal cord layer 4 S3
ipsi
SCL4S3
3
Spinal cord layer 1 S3
ipsi
SCL1S3
1
Spinal cord layer 2 S3
ipsi
SCL2S3
1
Spinal cord layer 7 S3
ipsi
SCL7S3
3
Spinal cord layer 8 S3
ipsi
SCL8S3
2
Spinal cord layer 5 S4
ipsi
SCL5S4
3
Spinal cord layer 6 S4
ipsi
SCL6S4
3
Spinal cord layer 3 S4
ipsi
SCL3S4
1
Spinal cord layer 4 S4
ipsi
SCL4S4
3
Spinal cord layer 1 S4
ipsi
SCL1S4
1
Spinal cord layer 2 S4
ipsi
SCL2S4
1
Spinal cord layer 7 S4
ipsi
SCL7S4
3
Spinal cord layer 8 S4
ipsi
SCL8S4
2
Paralemniscal nucleus
contra
PL
3
Nucleus of Darkschewitsch
contra
Dk
0.5
Red nucleus
contra
R
2
Red nucleus caudal third
contra
RnCat
3
Red nucleus dorsomedial part
contra
Rdm
3
Red nucleus magnocellular part
contra
RMC
4
Red nucleus rostral part
contra
RnRo
1
Red nucleus ventral part
contra
RV
-0.5
Tectum
contra
TEC
3
Superior colliculus intermediate layers
contra
SCi
3
Superior colliculus deep layers
contra
SCd
3
Deep gray layer of the superior colliculus
contra
DpG
-0.5
Central tegmental field
contra
TGAC
1
Substantia nigra A9
contra
SN
0
Laterodorsal tegmental nucleus
contra
LDTg
0.5
Bulbar tegmentum
contra
BuTe
3
Gigantocellular tegmental field
contra
GiCTeF
3
Parvocellular tegmental field
contra
PaTeF
2
Pedunculopontine tegmental nucleus
contra
PPTg
1
Edinger Westphal nucleus
contra
EW
0.5
Interstitial nucleus of Cajal
contra
InC
2
Interposed cerebellar nuclei
contra
ICN
3
Medial cerebellar nucleus
contra
Med
3
Locus coeruleus
contra
LC
2
Prepositus nucleus
contra
Pr
0.5
Intermediate reticular nucleus
contra
IRt
2
Medial reticular formation
contra
RFm
-0.5
Paramedian reticular nucleus
contra
PMn
0.5
Ventrolateral reticular formation
contra
VLRF
3
Mesencephalic reticular formation
contra
MRF
3
Pontine reticular nucleus
contra
PRN
3
Pontine reticular nucleus oral part
contra
PnO
1
Pontine reticular nucleus ventral part
contra
PnV
0.5
Ventrolateral pontine reticular formation
contra
vlPRF
0
Pontine reticular nucleus caudal part
contra
PNC
1
Cuneiforme nucleus
contra
CnF
2
Bulbar reticular formation
contra
BRF
3
Gigantocellular reticular nucleus
contra
Gi
3
Gigantocellular reticular nucleus alpha part
contra
GiA
3
Gigantocellular reticular nucleus ventral part
contra
GiV
2
Lateral reticular nucleus
contra
LRt
3
Medullary reticular nucleus
contra
MdD
1
Medial subnucleus reticularis ventralis
contra
MSRV
-0.5
Parvicellular reticular nucleus
contra
PCRt
2
Subcoeruleus nucleus
contra
SubC
2
Ambiguus nucleus
contra
Amb
0.5
Spinal trigeminal nucleus interpolar part
contra
Sp5I
1
Trigeminal ganglion
contra
5Gn
3
Mandibular region of the trigeminal ganglion at the level of the entry of the mandibular nerve
contra
5GnMaEm
3
Caudal area of the ophthalmomaxillary region of the trigeminal ganglion
contra
5GnCOM
3
Rostral area of the ophthalmomaxillary region of the trigeminal ganglion
contra
5GnROM
3
Superficial part of the trigeminal ganglion
contra
5GnS
3
Spinal vestibular nucleus
contra
SpVe
1
Vestibular nuclei
contra
Vnc
3
Medial vestibular nucleus
contra
MVe
2
Lateral vestibular nucleus
contra
LVe
1
Lateral vestibular nucleus dorsal part
contra
LVeD
1
Lateral vestibular nucleus ventral part
contra
LVeV
1
Raphe nuclei
contra
RAN
3
Raphe magnus nucleus
contra
RMg
1
Raphe obscurus nucleus
contra
ROb
1
Raphe pallidus nucleus
contra
RPa
1
Matrix region of the medulla
contra
Mx
1
Periolivary area
contra
POA
1
Paraambiguus nucleus
contra
PaAmb
3
Dorsal paragigantocellular nucleus
contra
DPGi
2
Lateral paragigantocellular nucleus
contra
LPGi
1
Lateral part of the lateral paragigantocellular nucleus
contra
LLPGi
0.5
Retroambiguus nucleus
contra
RAmb
3
Ventral surface of the medulla oblongata
contra
VSMeO
-0.5
Marginal surface of the ventral surface of the medulla oblongata
contra
msVSMeO
-0.5
Tuberomammillary nucleus
contra
TuM
1
Juxtaparaventricular part [Lateral hypothalamic area [Preoptic anterior region]]
contra
JPV
-0.5
Lateral hypothalamic area
contra
LH
1
Paraventricular hypothalamic nucleus caudal part
contra
PaPoC
0.5
Paraventricular hypothalamic nucleus lateral parvocellular part
contra
LPPa
0.5
Paraventricular hypothalamic nucleus medial parvocellular part
contra
MPPa
0.5
Paraventricular hypothalamic nucleus magnocellular part [Periventricular zone anterior region]
contra
PaAM
0.5
Paraventricular hypothalamic nucleus
contra
Pa
0.5
Paraventricular hypothalamic nucleus magnocellular division posterior part
contra
PaMagP
0.5
Paraventricular hypothalamic nucleus dorsal parvocellular division
contra
PavPoD
0.5
Paraventricular hypothalamic nucleus periventricular part
contra
Papv
0.5
Ventral hypothalamic region
contra
VHR
1
Caudate putamen
contra
CPu
0
Subthalamic nucleus
contra
STh
-0.5
Hippocampus
contra
HIPP
0
Piriform cortex
contra
Pir
0
Cerebral cortex layer 5
contra
CCL5
0.5
Cingulate cortex
contra
Cg
0
Frontal association cortex layer 5
contra
FrALL5
-0.5
Frontal association cortex posterior part layer 5
contra
FrApL5
-0.5
Parietal cortex posterior area dorsal part layer 5
contra
ParPDL5
1
Parietal association cortex layer 5
contra
ParPLa5
-0.5
Parietal cortex area 1 layer 5
contra
Par1L5
1
Parietal association cortex anterior area layer 5b
contra
PtAAL5b
-0.5
Prefrontal cortex
contra
PFC
-0.5
Prefrontal cortex layer 5
contra
PFCL5
1
Lateral agranular prefrontal cortex
contra
AGl
-0.5
Lateral agranular prefrontal cortex layer 5
contra
AGlL5
1
Medial agranular prefrontal cortex
contra
AGm
-0.5
Primary somatosensory cortex
contra
S1
-0.5
Primary somatosensory cortex layer 5
contra
S1L5
1
Secondary somatosensory cortex
contra
S2
-0.5
Secondary somatosensory cortex layer 5
contra
S2L5
1
Visual regions
contra
VR
0
Dorsal portion of the neocortex
contra
NEOCXD
-0.5
Nucleus of the posterior commissure
contra
PCom
-0.5
Olfactory cortex
contra
Ocx
0
Paracommissural nucleus of the posterior commissure
contra
PaC
0.5
Lateral spinal nucleus C1
contra
LSpC1
-0.5
Spinal cord layer 6 C1
contra
SCL6C1
1
Spinal cord layer 3 C1
contra
SCL3C1
1
Spinal cord layer 4 C1
contra
SCL4C1
1
Spinal cord layer 1 C1
contra
SCL1C1
0
Spinal cord layer 2 C1
contra
SCL2C1
0
Spinal cord layer 7 C1
contra
SCL7C1
1.5
Spinal cord layer 8 C1
contra
SCL8C1
1.5
Lateral spinal nucleus C2
contra
LSpC2
-0.5
Spinal cord layer 6 C2
contra
SCL6C2
1
Spinal cord layer 3 C2
contra
SCL3C2
1
Spinal cord layer 4 C2
contra
SCL4C2
1
Spinal cord layer 1 C2
contra
SCL1C2
0
Spinal cord layer 2 C2
contra
SCL2C2
0
Spinal cord layer 7 C2
contra
SCL7C2
1.5
Spinal cord layer 8 C2
contra
SCL8C2
1.5
Lateral spinal nucleus C3
contra
LSpC3
-0.5
Spinal cord layer 6 C3
contra
SCL6C3
1
Spinal cord layer 3 C3
contra
SCL3C3
1
Spinal cord layer 4 C3
contra
SCL4C3
1
Spinal cord layer 1 C3
contra
SCL1C3
0
Spinal cord layer 2 C3
contra
SCL2C3
0
Spinal cord layer 7 C3
contra
SCL7C3
1.5
Spinal cord layer 8 C3
contra
SCL8C3
1.5
Lateral spinal nucleus C4
contra
LSpC4
-0.5
Spinal cord layer 6 C4
contra
SCL6C4
1
Spinal cord layer 3 C4
contra
SCL3C4
1
Spinal cord layer 4 C4
contra
SCL4C4
1
Spinal cord layer 1 C4
contra
SCL1C4
0
Spinal cord layer 2 C4
contra
SCL2C4
0
Spinal cord layer 7 C4
contra
SCL7C4
1.5
Spinal cord layer 8 C4
contra
SCL8C4
1.5
Lateral spinal nucleus C5
contra
LSpC5
-0.5
Spinal cord layer 6 C5
contra
SCL6C5
1
Spinal cord layer 3 C5
contra
SCL3C5
1
Spinal cord layer 4 C5
contra
SCL4C5
1
Spinal cord layer 1 C5
contra
SCL1C5
0
Spinal cord layer 2 C5
contra
SCL2C5
0
Spinal cord layer 7 C5
contra
SCL7C5
1.5
Spinal cord layer 8 C5
contra
SCL8C5
1.5
Lateral spinal nucleus C6
contra
LSpC6
-0.5
Spinal cord layer 6 C6
contra
SCL6C6
1
Spinal cord layer 3 C6
contra
SCL3C6
1
Spinal cord layer 4 C6
contra
SCL4C6
1
Spinal cord layer 1 C6
contra
SCL1C6
0
Spinal cord layer 2 C6
contra
SCL2C6
0
Ventral horn C6
contra
VHC6
-0.5
Spinal cord layer 7 C6
contra
SCL7C6
1.5
Spinal cord layer 8 C6
contra
SCL8C6
1.5
Lateral spinal nucleus C7
contra
LSpC7
-0.5
Spinal cord layer 6 C7
contra
SCL6C7
1
Spinal cord layer 3 C7
contra
SCL3C7
1
Spinal cord layer 4 C7
contra
SCL4C7
1
Spinal cord layer 1 C7
contra
SCL1C7
0
Spinal cord layer 2 C7
contra
SCL2C7
0
Spinal cord layer 7 C7
contra
SCL7C7
1.5
Spinal cord layer 8 C7
contra
SCL8C7
1.5
Lateral spinal nucleus C8
contra
LSpC8
-0.5
Spinal cord layer 6 C8
contra
SCL6C8
1
Spinal cord layer 3 C8
contra
SCL3C8
1
Spinal cord layer 4 C8
contra
SCL4C8
1
Spinal cord layer 1 C8
contra
SCL1C8
0
Spinal cord layer 2 C8
contra
SCL2C8
0
Spinal cord layer 7 C8
contra
SCL7C8
1.5
Spinal cord layer 8 C8
contra
SCL8C8
1.5
Lateral spinal nucleus T1
contra
LSpT1
-0.5
Spinal cord layer 6 T1
contra
SCL6T1
1
Spinal cord layer 3 T1
contra
SCL3T1
1
Spinal cord layer 4 T1
contra
SCL4T1
1
Spinal cord layer 1 T1
contra
SCL1T1
0
Spinal cord layer 2 T1
contra
SCL2T1
0
Spinal cord layer 7 T1
contra
SCL7T1
1.5
Spinal cord layer 8 T1
contra
SCL8T1
1.5
Spinal cord layer 6 T2
contra
SCL6T2
1
Spinal cord layer 3 T2
contra
SCL3T2
1
Spinal cord layer 4 T2
contra
SCL4T2
1
Spinal cord layer 1 T2
contra
SCL1T2
0
Spinal cord layer 2 T2
contra
SCL2T2
0
Spinal cord layer 7 T2
contra
SCL7T2
1.5
Spinal cord layer 8 T2
contra
SCL8T2
1.5
Spinal cord layer 6 T3
contra
SCL6T3
1
Spinal cord layer 3 T3
contra
SCL3T3
1
Spinal cord layer 4 T3
contra
SCL4T3
1
Spinal cord layer 1 T3
contra
SCL1T3
0
Spinal cord layer 2 T3
contra
SCL2T3
0
Spinal cord layer 7 T3
contra
SCL7T3
1.5
Spinal cord layer 8 T3
contra
SCL8T3
1.5
Spinal cord layer 6 T4
contra
SCL6T4
1
Spinal cord layer 3 T4
contra
SCL3T4
1
Spinal cord layer 4 T4
contra
SCL4T4
1
Spinal cord layer 1 T4
contra
SCL1T4
0
Spinal cord layer 2 T4
contra
SCL2T4
0
Spinal cord layer 7 T4
contra
SCL7T4
1.5
Spinal cord layer 8 T4
contra
SCL8T4
1.5
Spinal cord layer 6 T5
contra
SCL6T5
1
Spinal cord layer 3 T5
contra
SCL3T5
1
Spinal cord layer 4 T5
contra
SCL4T5
1
Spinal cord layer 1 T5
contra
SCL1T5
0
Spinal cord layer 2 T5
contra
SCL2T5
0
Spinal cord layer 7 T5
contra
SCL7T5
1.5
Spinal cord layer 8 T5
contra
SCL8T5
1.5
Spinal cord layer 6 T6
contra
SCL6T6
1
Spinal cord layer 3 T6
contra
SCL3T6
1
Spinal cord layer 4 T6
contra
SCL4T6
1
Spinal cord layer 1 T6
contra
SCL1T6
0
Spinal cord layer 2 T6
contra
SCL2T6
0
Spinal cord layer 7 T6
contra
SCL7T6
1.5
Spinal cord layer 8 T6
contra
SCL8T6
1.5
Spinal cord layer 6 T7
contra
SCL6T7
1
Spinal cord layer 3 T7
contra
SCL3T7
1
Spinal cord layer 1 T7
contra
SCL1T7
0
Spinal cord layer 4 T7
contra
SCL4T7
1
Spinal cord layer 2 T7
contra
SCL2T7
0
Spinal cord layer 7 T7
contra
SCL7T7
1.5
Spinal cord layer 8 T7
contra
SCL8T7
1.5
Spinal cord layer 6 T8
contra
SCL6T8
1
Spinal cord layer 3 T8
contra
SCL3T8
1
Spinal cord layer 4 T8
contra
SCL4T8
1
Spinal cord layer 1 T8
contra
SCL1T8
0
Spinal cord layer 2 T8
contra
SCL2T8
0
Spinal cord layer 7 T8
contra
SCL7T8
1.5
Spinal cord layer 8 T8
contra
SCL8T8
1.5
Spinal cord layer 6 T9
contra
SCL6T9
1
Spinal cord layer 3 T9
contra
SCL3T9
1
Spinal cord layer 4 T9
contra
SCL4T9
1
Spinal cord layer 1 T9
contra
SCL1T9
0
Spinal cord layer 2 T9
contra
SCL2T9
0
Spinal cord layer 7 T9
contra
SCL7T9
1.5
Spinal cord layer 8 T9
contra
SCL8T9
1.5
Spinal cord layer 6 T10
contra
SCL6T10
1
Spinal cord layer 3 T10
contra
SCL3T10
1
Spinal cord layer 4 T10
contra
SCL4T10
1
Spinal cord layer 1 T10
contra
SCL1T10
0
Spinal cord layer 2 T10
contra
SCL2T10
0
Spinal cord layer 7 T10
contra
SCL7T10
1.5
Spinal cord layer 8 T10
contra
SCL8T10
1.5
Spinal cord layer 6 T11
contra
SCL6T11
1
Spinal cord layer 3 T11
contra
SCL3T11
1
Spinal cord layer 4 T11
contra
SCL4T11
1
Spinal cord layer 1 T11
contra
SCL1T11
0
Spinal cord layer 2 T11
contra
SCL2T11
0
Spinal cord layer 7 T11
contra
SCL7T11
1.5
Spinal cord layer 8 T11
contra
SCL8T11
1.5
Spinal cord layer 6 T12
contra
SCL6T12
1
Spinal cord layer 3 T12
contra
SCL3T12
1
Spinal cord layer 4 T12
contra
SCL4T12
1
Spinal cord layer 1 T12
contra
SCL1T12
0
Spinal cord layer 2 T12
contra
SCL2T12
0
Spinal cord layer 7 T12
contra
SCL7T12
1.5
Spinal cord layer 8 T12
contra
SCL8T12
1.5
Spinal cord layer 6 T13
contra
SCL6T13
1
Spinal cord layer 3 T13
contra
SCL3T13
1
Spinal cord layer 4 T13
contra
SCL4T13
1
Spinal cord layer 1 T13
contra
SCL1T13
0
Spinal cord layer 2 T13
contra
SCL2T13
0
Spinal cord layer 7 T13
contra
SCL7T13
1.5
Spinal cord layer 8 T13
contra
SCL8T13
1.5
Spinal cord layer 6 L1
contra
SCL6L1
1
Spinal cord layer 3 L1
contra
SCL3L1
1
Spinal cord layer 4 L1
contra
SCL4L1
1
Spinal cord layer 1 L1
contra
SCL1L1
0
Spinal cord layer 7 L1
contra
SCL7L1
1.5
Spinal cord layer 8 L1
contra
SCL8L1
1.5
Spinal cord layer 6 L2
contra
SCL6L2
1
Spinal cord layer 3 L2
contra
SCL3L2
1
Spinal cord layer 4 L2
contra
SCL4L2
1
Spinal cord layer 1 L2
contra
SCL1L2
0
Spinal cord layer 7 L2
contra
SCL7L2
1.5
Spinal cord layer 8 L2
contra
SCL8L2
1.5
Spinal cord layer 6 L3
contra
SCL6L3
1
Spinal cord layer 3 L3
contra
SCL3L3
1
Spinal cord layer 4 L3
contra
SCL4L3
1
Spinal cord layer 1 L3
contra
SCL1L3
0
Spinal cord layer 7 L3
contra
SCL7L3
1.5
Spinal cord layer 8 L3
contra
SCL8L3
1.5
Spinal cord layer 6 L4
contra
SCL6L4
1
Spinal cord layer 3 L4
contra
SCL3L4
1
Spinal cord layer 4 L4
contra
SCL4L4
1
Spinal cord layer 1 L4
contra
SCL1L4
0
Spinal cord layer 7 L4
contra
SCL7L4
1.5
Spinal cord layer 8 L4
contra
SCL8L4
1.5
Spinal cord layer 6 L5
contra
SCL6L5
1
Spinal cord layer 3 L5
contra
SCL3L5
1
Spinal cord layer 4 L5
contra
SCL4L5
1
Spinal cord layer 1 L5
contra
SCL1L5
0
Spinal cord layer 7 L5
contra
SCL7L5
1.5
Spinal cord layer 8 L5
contra
SCL8L5
1.5
Spinal cord layer 6 L6
contra
SCL6L6
1
Spinal cord layer 3 L6
contra
SCL3L6
1
Spinal cord layer 4 L6
contra
SCL4L6
1
Spinal cord layer 1 L6
contra
SCL1L6
0
Spinal cord layer 7 L6
contra
SCL7L6
1.5
Spinal cord layer 8 L6
contra
SCL8L6
1.5
Spinal cord layer 6 S1
contra
SCL6S1
1
Spinal cord layer 3 S1
contra
SCL3S1
1
Spinal cord layer 4 S1
contra
SCL4S1
1
Spinal cord layer 1 S1
contra
SCL1S1
0
Spinal cord layer 7 S1
contra
SCL7S1
1.5
Spinal cord layer 8 S1
contra
SCL8S1
1.5
Spinal cord layer 6 S2
contra
SCL6S2
1
Spinal cord layer 3 S2
contra
SCL3S2
1
Spinal cord layer 4 S2
contra
SCL4S2
1
Spinal cord layer 1 S2
contra
SCL1S2
0
Spinal cord layer 7 S2
contra
SCL7S2
1.5
Spinal cord layer 8 S2
contra
SCL8S2
1.5
Spinal cord layer 6 S3
contra
SCL6S3
1
Spinal cord layer 3 S3
contra
SCL3S3
1
Spinal cord layer 4 S3
contra
SCL4S3
1
Spinal cord layer 1 S3
contra
SCL1S3
0
Spinal cord layer 7 S3
contra
SCL7S3
1.5
Spinal cord layer 8 S3
contra
SCL8S3
1.5
Spinal cord layer 6 S4
contra
SCL6S4
1
Spinal cord layer 3 S4
contra
SCL3S4
1
Spinal cord layer 4 S4
contra
SCL4S4
1
Spinal cord layer 1 S4
contra
SCL1S4
0
Spinal cord layer 7 S4
contra
SCL7S4
1.5
Spinal cord layer 8 S4
contra
SCL8S4
1.5
Greater occipital nerve
ipsi
PNSgo
-0.5
Sternomastoid nerve
ipsi
smn
2
Infraorbital nerve
contra
iobn
-0.5
Vibrissal follicle row A
ipsi
VFCrA
-0.5
Vibrissal follicle row B
ipsi
VFCrB
-0.5
Vibrissal follicle row C
ipsi
VFCrC
-0.5
Vibrissal follicle row D
ipsi
VFCrD
-0.5
Vibrissal follicle row E
ipsi
VFCrE
-0.5
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
|
Staff
|
neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
|
Students
|
Links
|
Publications