Department of Anatomy University of Rostock

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Rat connectome

Whisker motor cortex subfields left

Abbreviation	WMCxS
Color
Superior regions	Whiskers motor cortex

Synonyms	Abbr.	Language
Whisker motor cortex subfields	WMCxS

Subregions	Side
Whisker motor cortex row A	left
Whisker motor cortex row B	left
Whisker motor cortex row C	left
Whisker motor cortex row D	left
Whisker motor cortex row E	left

Output to

Name	Side	Abbr.	Weight
Central gray lateral part	ipsi	CGL	-0.5
Red nucleus parvicellular part	ipsi	ROC	1
Superior colliculus	ipsi	SC	-0.5
Superior colliculus intermediate layers	ipsi	SCi	-0.5
Deep gray layer of the superior colliculus	ipsi	DpG	-0.5
Pontine nuclei	ipsi	Pn	3
Reticular system	ipsi	RF	1
Deep mesencephalic nucleus	ipsi	DpMe	3
Pontine reticular nucleus	ipsi	PRN	0.5
Centrolateral thalamic nucleus	ipsi	CL	2
Parafascicular thalamic nucleus	ipsi	PF	1
Posterior thalamic nuclear group	ipsi	Po	2
Mediodorsal thalamic nucleus lateral part	ipsi	MDL	2
Ventrolateral thalamic nucleus	ipsi	VL	2
Ventromedial thalamic nucleus	ipsi	VM	2
Zona incerta	ipsi	ZI	-0.5
Anterior pretectal nucleus	ipsi	APT	2
Caudate putamen	ipsi	CPu	2
Retrosplenial agranular cortex	ipsi	RSA	-0.5
Frontal cortex area 1 layer 5	ipsi	Fr1L5	-0.5
Frontal cortex area 1 layer 1	ipsi	Fr1L1	-0.5
Frontal cortex area 1 layer 2	ipsi	Fr1L2	-0.5
Frontal cortex area 1 layer 3	ipsi	Fr1L3	-0.5
Parietal cortex area 1 layer 1	ipsi	Par1L1	2
Parietal cortex area 1 layer 2	ipsi	Par1L2	1
Parietal cortex area 1 layer 3	ipsi	Par1L3	1
Parietal cortex area 1 layer 5	ipsi	Par1L5	2
Parietal cortex area 2 layer 5	ipsi	Par2L5	2
Parietal cortex area 2 layer 1	ipsi	Par2L1	2
Perirhinal cortex	ipsi	A35	-0.5
Lateral orbital cortex	ipsi	LO	-0.5
Ventrolateral orbital area	ipsi	VLO	-0.5
Pyramidal tract	ipsi	py	-2
Spinal trigeminal nucleus oral part	contra	Sp5O	1
Ventrolateral thalamic nucleus	contra	VL	1
Caudate putamen	contra	CPu	1
Frontal cortex area 1 layer 5	contra	Fr1L5	2
Frontal cortex area 1 layer 1	contra	Fr1L1	2
Frontal cortex area 1 layer 2	contra	Fr1L2	2
Frontal cortex area 1 layer 3	contra	Fr1L3	2
Parietal cortex area 1 layer 1	contra	Par1L1	1

Input from

Name	Side	Abbr.	Weight
Centrolateral thalamic nucleus	ipsi	CL	2
Posterior thalamic nuclear group	ipsi	Po	1
Mediodorsal thalamic nucleus lateral part	ipsi	MDL	2
Ventrolateral thalamic nucleus	ipsi	VL	2
Ventromedial thalamic nucleus	ipsi	VM	2
Frontal cortex area 1 layer 1	ipsi	Fr1L1	-0.5
Frontal cortex area 1 layer 2	ipsi	Fr1L2	-0.5
Frontal cortex area 1 layer 3	ipsi	Fr1L3	-0.5
Parietal cortex area 2 layer 3	ipsi	Par2L3	2
Parietal cortex area 2 layer 5	ipsi	Par2L5	2
Parietal cortex area 2 layer 1	ipsi	Par2L1	2
Ventrolateral thalamic nucleus	contra	VL	1

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong