University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Central gray lateral part left


Abbreviation
CGL
Color       
Superior regionsCentral gray

SynonymsAbbr.Language
Central gray lateral partCGLEng
Lateral part of the central gray Eng

SubregionsSide
Central gray lateral dorsal partleft
Central gray lateral ventral partleft

Output to

NameSideAbbr.WeightDetails
Ventrolateral tegmental areaipsiVLTg3
Dorsal raphe nucleus dorsal partipsiDRD3
Dorsal raphe nucleus lateral wingipsiDRlw4
Dorsal raphe nucleus rostral partipsiDRr1
Dorsal raphe nucleus ventral partipsiDRV2
Rostral ventrolateral medullaipsiRVLM4
Lateral preoptic areaipsiLPO-0.5
Medial preoptic areaipsiMPA-0.5
Medial preoptic nucleusipsiMPO-0.5
Median preoptic nucleusipsiMnPO0
Tenia tectaipsiTT1
Anterior hypothalamic areaipsiAHA1
Posterior periventricular nucleusipsiPeP3
Preoptic periventricular nucleusipsiPePO-0.5
Suprachiasmatic nucleusipsiSCh1
Mammillary bodyipsiCMAM3
Anteroventral thalamic nucleusipsiAV2
Central medial thalamic nucleus lateral partipsiCMl2
Centrolateral thalamic nucleus rostral partipsiCLr2
Paraventricular thalamic nucleusipsiPV-0.5
Ventrolateral thalamic nucleus dorsal partipsiVLD2
Reticular thalamic nucleusipsiRt2
Lateral habenular nucleusipsiLHb1
Medial habenular nucleusipsiMHb0
Ventral pallidumipsiVP-0.5
Accumbens nucleusipsiAc-0.5
Lateral geniculate complexipsiLG-0.5
Interpeduncular nucleusipsiIP-0.5
Olfactory tubercleipsiTuO1
Lateral septal nucleusipsiLS1
Intermediolateral cell column L6ipsiIMLL6-0.5
Ventrolateral tegmental areacontraVLTg1
Dorsal raphe nucleus lateral wingcontraDRlw4
Lateral preoptic areacontraLPO-0.5
Medial preoptic nucleuscontraMPO-0.5
Tenia tectacontraTT0.5
Anterior hypothalamic areacontraAHA0.5
Posterior periventricular nucleuscontraPeP1
Mammillary bodycontraCMAM1
Anteroventral thalamic nucleuscontraAV1
Central medial thalamic nucleus lateral partcontraCMl1
Centrolateral thalamic nucleus rostral partcontraCLr1
Ventrolateral thalamic nucleus dorsal partcontraVLD1
Reticular thalamic nucleuscontraRt1
Lateral habenular nucleuscontraLHb0.5
Medial habenular nucleuscontraMHb0
Ventral pallidumcontraVP-0.5
Accumbens nucleuscontraAc-0.5
Lateral geniculate complexcontraLG-0.5
Interpeduncular nucleuscontraIP-0.5
Olfactory tuberclecontraTuO0.5
Lateral septal nucleuscontraLS0.5
Intermediolateral cell column L6contraIMLL6-0.5

Input from

NameSideAbbr.WeightDetails
Substantia nigra A9 dorsal partipsiSND-0.5
Substantia nigra lateral partipsiSNL-0.5
Ventrolateral tegmental areaipsiVLTg1
Superior central raphe nucleusipsiCS1
Lateral zoneipsiLHA-0.5
Lateral hypothalamic area posterior partipsiLHAp1
Ventromedial hypothalamic nucleusipsiVMH3
Arcuate nucleusipsiArc0.5
Parafascicular thalamic nucleus ventral partipsiPFV2
Paraventricular thalamic nucleusipsiPV2
Zona incertaipsiZI-0.5
HabenulaipsiHAB2
Central amygdaloid nucleusipsiCe0.5
Medial accumbens shellipsiAcbShm-0.5
Ventral shellipsiAcbShv-0.5
Subthalamic nucleus medial partipsiSThM1
Central part of jaw motor areaipsiCJMCx2
Whisker motor cortex subfieldsipsiWMCxS-0.5
Rostral portion of the caudal medial agranular prefrontal cortexipsiRcAGm-0.5
Caudal portion of the caudal medial agranular prefrontal cortexipsiccAGm-0.5
Sensory regionsipsiSR-0.5
Ventrolateral tegmental areacontraVLTg1
Interposed cerebellar nucleicontraICN2
Lateral cerebellar nucleuscontraCERL2
Medial cerebellar nucleus caudal partcontraMedc0.5
Central amygdaloid nucleuscontraCe-1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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