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Rat connectome



Retrosplenial agranular cortex left


Abbreviation
RSA
Color       
Superior regionsRetrosplenial cortex

SynonymsAbbr.Language
 RSPagl 
Posterior retrospenial cortex  
Agranular retrosplenial cortex  
Caudal retrosplenial cortex  
Retrosplenial agranular cortexRSAEng
Retrosplenial cortex  
Retrosplenial dysgranular cortex  
Retrosplenial agranular cortexRSaglEng

SubregionsSide
Medial rostrocaudal part of the retrosplenial agranular cortexleft
Retrosplenial agranular cortex caudal partleft
Retrosplenial agranular cortex rostral partleft
Retrosplenial agranular cortex layersleft
Retrosplenial agranular cortex lateral partleft

Output to

NameSideAbbr.WeightDetails
Central gray pons partipsiCGP1
Central gray pons dorsolateral partipsiCGPdl-0.5
Periaqueductal grayipsiPAG3
Dorsolateral periaqueductal grayipsiDLPAG-0.5
Periaqueductal gray rostral partipsiPAGR-0.5
Superior colliculusipsiSC3
Superior colliculus intermediate layersipsiSCi3
Superior colliculus deep layersipsiSCd3
Substantia nigra compact partipsiSNC1
Ventral tegmental area A10ipsiVTA1
Dorsal tegmental nucleusipsiDTg1
Cerebellar lobule 7ipsiCERL7-10
Pontine grayipsiPG3
Ventral reticular formationipsiVRF1
Pontine reticular nucleusipsiPRN1
Parvicellular reticular nucleusipsiPCRt0
Raphe nucleiipsiRAN1
Median raphe nucleusipsiMnR1
Dorsal endopiriform nucleusipsiDEn0
Ventral endopiriform nucleusipsiVEn0
Diagonal band of BrocaipsiDBB3
Medial septal nucleusipsiMS-0.5
Lateral preoptic areaipsiLPO1
Dorsal tenia tectaipsiDTT0
Ventral tenia tectaipsiVTT0
DiencephalonipsiDEC-0.5
HypothalamusipsiHYPO-0.5
Lateral hypothalamic area rostral partipsiLHro1
Dorsal part of the anterior hypothalamic nucleusipsiAHnD1
Posterior hypothalamic nucleusipsiPH1
Dorsal thalamusipsiDOR-0.5
Anteromedial thalamic nucleusipsiAM3
Anteromedial thalamic nucleus caudalmedial partipsiAMCm0
Anteromedial thalamic nucleus dorsal partipsiAMd1
Anteromedial thalamic nucleus ventral partipsiAMV3
Rostroventral anteromedial thalamic nucleusipsiAMRV3
Anteroventral thalamic nucleusipsiAV2.5
Anteroventral thalamic nucleus rostral partipsiAVRo1
Interoanteromedial thalamic nucleusipsiIAM0
Centrolateral thalamic nucleusipsiCL1
Centrolateral thalamic nucleus dorsal partipsiCLD-0.5
Suprageniculate thalamic nucleusipsiSG3
Mediodorsal thalamic nucleus lateral partipsiMDL1
Rostral zone of the lateral part of the mediodorsal thalamic nucleusipsiMDLR2
Mediodorsal thalamic nucleus medial partipsiMDM-0.5
Reuniens thalamic nucleusipsiRe1
Reuniens thalamic nucleus caudomedial divisionipsiRecm2
Nucleus reuniens rostral divisionipsiRER3
Reunienes thalamic nucleus rostromedial divisionipsiRerm1
Reuniens thalamic nucleus rostrolateral divisionipsiRerl1
Lateral posterior thalamic nucleus medial partipsiLPM3
Lateral posterior thalamic nucleus mediorostral partipsiLPMR2
Rostromedial parts of the lateral posterior thalamic nucleus medial partipsiLPMrm-0.5
Caudal region of the lateral posterior thalamic nucleus medial partipsiLPMCa1
Laterodorsal thalamic nucleusipsiLD1
Laterodorsal thalamic nucleus dorsal partipsiLDD1
Ventral thalamusipsiVNT-0.5
Reticular thalamic nucleusipsiRt3
Dorsal central reticular thalamic nucleusipsiRtDCe3
Reticular thalamic nucleus dorsal partipsiRtD1
Reticular thalamic nucleus rostral partipsiRtr3
Subparafascicular thalamic nucleus caudal partipsiSPFc1
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Zona incertaipsiZI2
Caudalolateral regions of the zona incertaipsiZICL3
Zona incerta rostromedial partipsiZIrm3
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT1
Medial pretectal nucleusipsiMPT-0.5
Pineal glandipsiPi1
External capsuleipsiec-0.5
Internal capsuleipsiic-0.5
Cerebral peduncle basal partipsicp-0.5
Corpus callosumipsicc-0.5
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Anterior basomedial nucleusipsiBMA0
Posterior basomedial nucleusipsiBMP0
Lateral amygdaloid nucleusipsiLA0
Amygdalopiriform transition areaipsiAPir0
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp0
Posterolateral cortical nucleusipsiPLCo0
Nucleus of the lateral olfactory tractipsiLOT0
Posteromedial cortical nucleusipsiPMCo0
ClaustrumipsiCl3
Anterior part of the claustrumipsiACl1
Caudal part of claustrumipsiCCl3
Dorsomedial striatumipsiCPudm2
Dorsomedial striatum rostral partipsiCPudmr2
Caudal striatumipsiCPuc3
Dorsocentral striatumipsiDCS1
Ventrolateral striatumipsiCPuvl1
Dentate gyrusipsiDG0
Field CA1 of hippocampus dorsalipsiCA1d0
Field CA1 of hippocampus ventral partipsiCA1v0
Field CA2 of hippocampusipsiCA20
Field CA3 of hippocampusipsiCA30
Septal part of the field CA3 of hippocampusipsiSCA3-0.5
Subiculum dorsal partipsiSd1
Subiculum septal distal partipsiSsed-0.5
Subiculum ventral partipsiSv3
Indusium griseumipsiIG0.5
PresubiculumipsiPrS4
Presubiculum dorsal part layer 5ipsiPrDL5-0.5
Presubiculum dorsal part layer 3ipsiPrDL3-0.5
Presubiculum layer 1ipsiPrSL12
ParasubiculumipsiPaS3
Parasubiculum layer 1ipsiPaSL12
PostsubiculumipsiPost4
Dorsolateral entorhinal cortexipsiDLEnt-0.5
Lateral entorhinal cortexipsiLEnt3
Medial entorhinal cortexipsiMEnt1
Medial entorhinal cortex dorsal partipsiMEntD3
Medial entorhinal cortex dorsal part layer 5ipsiMEntdoLyL53
Medial entorhinal cortex layer 3ipsiMEntLyL30.5
Intermediate medial entorhinal cortex layer 5ipsiMEntimL5-0.5
Piriform cortexipsiPir0
Postpiriform transition areaipsiTR0
Retrosplenial regionsipsiRS1
Retrosplenial cortex posterior partipsiRSpo1
Retrosplenial dorsalipsiRSd4
Retrosplenial ventral partipsiRSPv4
Retrosplenial ventral aipsiRSv-a4
Retrosplenial area ventral part zone b/cipsiRSPv-bc4
Retrosplenial agranular cortex layer 5ipsiRSAL5-0.5
Retrosplenial agranular cortex layer 1ipsiRSAL1-0.5
Retrosplenial agranular cortex layer 3ipsiRSAL3-0.5
Retrosplenial granular cortex a regionipsiRSGa3
Area 29aipsiA29a-0.5
Area 29a layer 1ipsiA29aL1-0.5
Area 29a layer 6ipsiA29aL6-2
Area 29bipsiA29b-0.5
Area 29b layer 1ipsiA29bL1-0.5
Area 29b layer 2ipsiA29bL2-0.5
Area 29b layer 3ipsiA29bL3-0.5
Area 29b layer 4ipsiA29bL4-0.5
Area 29b layer 5ipsiA29bL5-0.5
Area 29b layer 6ipsiA29bL6-2
Area 29dipsiA29d-0.5
Area 29d layer 1ipsiA29dL1-0.5
Area 29d layer 6ipsiA29dL6-2
Retrosplenial granular cortex c regionipsiRSGc-0.5
Middle part of area 29c layer 1ipsiRSGcmiL1-0.5
Middle part of area 29c layer 6ipsiRSGcmiL6-2
Anterior cingulate cortexipsiACC1
Anterior cingulate cortex layer 5ipsiACCL5-0.5
Dorsal anterior cingulate cortexipsiDACC2.5
Dorsal anterior cingulate cortex layer 1ipsiDACCL1-0.5
Ventral anterior cingulate cortexipsiVACC3
Cingulumipsicg3
Prelimbic cortexipsiPrL2
Prelimbic cortex caudal partipsiPrLc-0.5
Infralimbic cortexipsiIL2.5
Frontal association cortexipsiFrA2
Parietal association cortexipsiPtA3
Parietal cortex posterior areaipsiParP2
Caudoventral parts of the parietal cortex posterior area lateral portionipsiParPLCV-0.5
Temporal cortexipsiTE2.5
Temporal association area 2ipsiTe2-0.5
Temporal association area 2 caudal partipsiTe2C-0.5
Temporal association area 3ipsiTe3-0.5
Temporal association area 3 ventrocaudal portionipsiTe3vc-0.5
Auditory regionsipsiAU3
Primary auditory cortexipsiAu11.5
Ventral auditory areasipsiAUDv1.5
Agranular insular cortex dorsal partipsiAID1.5
Agranular insular cortex posterior partipsiAIP0
Agranular insular cortex ventral partipsiAIV0
Gustatory dysgranular insular cortexipsiDIg0
Granular insular cortexipsiGI0
Perirhinal cortexipsiA351.5
Perirhinal cortex upper partipsiPRhu-0.5
Ectorhinal cortexipsiA362
Motoric regionsipsiM0
Lateral agranular prefrontal cortexipsiAGl0
Elbow flexion motor cortexipsiEFMCx1
Ankle dorsiflexion motor cortexipsiADFMCx0
Ankle plantar flexion motor cortexipsiAPFMCx1
Hip flexion motor cortexipsiHFMCx1
Medial agranular prefrontal cortexipsiAGm2.5
Primary somatosensory cortexipsiS10
Secondary somatosensory cortexipsiS20
Visual regionsipsiVR3
Area 17 area 18 border regionipsiVR1B2-0.5
Primary visual cortexipsiV12.5
Primary visual cortex lateral partipsiV1La-0.5
Primary visual cortex layer 1ipsiV1L13
Primary visual cortex medial partipsiV1Med-0.5
Visual cortical area 17 adjacent to area 18bipsiV1V2b1
Secondary visual cortex medial areaipsiV2M2
Secondary visual cortex lateral areaipsiV2L2
Secondary visual cortex lateral area infragranular layersipsiV2LigL2
Primary visual cortex binocular areaipsiV1B2.5
Intermediolateral cortical visual areaipsiVISli2
Laterolateral cortical visual areaipsiVISll1.5
Mediolateral cortical visual areaipsiVISlm2
Posterolateral cortical visual areaipsiVISpl1.5
Rostrolateral cortical visual areaipsiVISrl0
Anteromedial cortical visual areaipsiVISam2.5
Orbital cortexipsiOrC1
Lateral orbital cortexipsiLO0
Ventral orbital cortexipsiVO0
Ventrolateral orbital areaipsiVLO3
Ventrolateral orbital area layer 1ipsiVLOL12
Nucleus of the posterior commissureipsiPCom3
Ventral lateral geniculate nucleus medial partipsiVLGM3
Interpeduncular nucleus caudal subnucleusipsiIPC-0.5
Interpeduncular nucleus dorsal subnucleusipsiIPRd-0.5
Interpeduncular nucleus dorsolateral partipsiIPRdL-0.5
Interpeduncular nucleus intermediate subnucleusipsiIPI-0.5
Interpeduncular nucleus lateral subnucleusipsiIPL-0.5
Accessory olfactory bulbipsiAOB0
Olfactory bulb A16ipsiMOB0
Anterior olfactory nucleusipsiAON0
Septal regionipsiSER1
Stria terminalisipsist-0.5
Superior colliculus intermediate and deep layerscontraSCidLa-0.5
Pontine reticular nucleuscontraPRN0.5
Parvicellular reticular nucleuscontraPCRt0
Anteromedial thalamic nucleuscontraAM1
Reuniens thalamic nucleuscontraRe1
Laterodorsal thalamic nucleuscontraLD1
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Zona incertacontraZI0
Dorsomedial striatumcontraCPudm2
Dorsomedial striatum rostral partcontraCPudmr1
Caudal striatumcontraCPuc1
Frontal association cortexcontraFrA-0.5
Parietal association cortexcontraPtA-0.5
Primary visual cortexcontraV11
Secondary visual cortex medial areacontraV2M2
Secondary visual cortex lateral areacontraV2L2
Secondary visual cortex lateral area infragranular layerscontraV2LigL2

Input from

NameSideAbbr.WeightDetails
MesencephalonipsiMEC-0.5
Central gray mesencephalic part ventromedial partipsiCGMvm1
Periaqueductal grayipsiPAG1
Dorsal tegmental nucleus lateral partipsiDLTN2
Pedunculopontine tegmental nucleusipsiPPTg2
Locus coeruleusipsiLC1
Nucleus incertus pars compactaipsiNIc1
Nucleus incertus pars dissipataipsiNId0.5
Mesencephalic reticular formationipsiMRF1
Pontine reticular nucleusipsiPRN0
Dorsal raphe nucleusipsiDR2
Median raphe nucleusipsiMnR-0.5
Medulla oblongata rostroventralipsiMeObRV-0.5
Basal forebrainipsiBAF2.5
Dorsal endopiriform nucleusipsiDEn0
Ventral endopiriform nucleusipsiVEn0
Anterior part of the endopiriform nucleusipsiEnNa0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Lateral part of the nucleus of the horizontal limb of the diagonal bandipsiLPHDB-1
Nucleus of the horizontal limb of the diagonal band angular partipsiHDBa-1
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm3
Nucleus of the vertical limb of the diagonal bandipsiVDB-1
Nucleus of the vertical limb of the diagonal band caudal partipsiVDBc1.5
Nucleus of the vertical limb of the diagonal band rostromedial partipsiVDBrm1.5
Medial septal nucleusipsiMS-1
Medial septal nucleus lateral partipsiMSLa1
Medial septal nucleus medial partipsiMSm1
Basal nucleus MeynertipsiB-1
Basal nucleus Meynert anterior partipsiBan2
Basal nucleus Meynert intermediate divisonipsiBim1.5
Substantia innominataipsiSI-1
Magnocellular preoptic nucleusipsiMCPO-1
Dorsal tenia tectaipsiDTT2
Ventral tenia tectaipsiVTT0
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo0
Medial mammillary nucleus lateral partipsiML2
Posterior mammillay nucleusipsiPMAM2
ThalamusipsiT-0.5
Anterior group of the dorsal thalamusipsiATN0
Anteromedial thalamic nucleusipsiAM-0.5
Anteromedial thalamic nucleus ventral partipsiAMV-0.5
Anteroventral thalamic nucleusipsiAV1
Interoanteromedial thalamic nucleusipsiIAM3
Centrolateral thalamic nucleus dorsal partipsiCLD-0.5
Rhomboid thalamic nucleusipsiRh-0.5
Mediodorsal thalamic nucleus lateral partipsiMDL-0.5
Nucleus reuniens rostral divisionipsiRER0.5
Lateral posterior thalamic nucleusipsiLP1
Lateral posterior thalamic nucleus medial partipsiLPM-0.5
Lateral posterior thalamic nucleus mediorostral partipsiLPMR-0.5
Laterodorsal thalamic nucleusipsiLD-0.5
Posterior groupipsiPTG2.5
Medial habenular nucleusipsiMHb2
Medial pretectal nucleusipsiMPT2
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Anterior basomedial nucleusipsiBMA0
Posterior basomedial nucleusipsiBMP0
Lateral amygdaloid nucleusipsiLA1.5
Amygdalopiriform transition areaipsiAPir0
Anterior amygdaloid area lateral partipsiAAL4
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp0
Posterolateral cortical nucleusipsiPLCo0
Nucleus of the lateral olfactory tractipsiLOT0
Posteromedial cortical nucleusipsiPMCo0
ClaustrumipsiCl3
Anterior part of the claustrumipsiACl3
Central part of claustrumipsiCeCl1.5
Ventromedial portion of the dorsal claustrumipsiDClvm2.5
Lateral part of claustrumipsiClL1.5
Posterior part of the claustrumipsiClP1
Neurons of claustrum along the external capsuleipsiClnexcap3
Rostrocaudal extent of the insular claustrumipsiiClrc-0.5
Globus pallidusipsiGP-1
Ventral pallidumipsiVP-1
HippocampusipsiHIPP1
Dentate gyrusipsiDG0
Field CA1 of hippocampus dorsalipsiCA1d0
Field CA1 of hippocampus ventral partipsiCA1v0
Field CA2 of hippocampusipsiCA20
Field CA3 of hippocampusipsiCA30
Subiculum dorsal partipsiSd0
Subiculum ventral partipsiSv0.5
Indusium griseumipsiIG0
PresubiculumipsiPrS0
Presubiculum layer 5ipsiPrSL5-10
ParasubiculumipsiPaS0
PostsubiculumipsiPost0
Lateral entorhinal cortexipsiLEnt1.5
Medial entorhinal cortex dorsal partipsiMEntD0.5
Caudal entorhinal field 1ipsiCEnt12
Piriform cortexipsiPir0
Postpiriform transition areaipsiTR0
Retrosplenial cortex posterior partipsiRSpo3
Retrosplenial dorsalipsiRSd3
Retrosplenial ventral partipsiRSPv3
Retrosplenial ventral aipsiRSv-a3
Retrosplenial area ventral part zone b/cipsiRSPv-bc0
Anterioposterior levels of the retrosplenial cortexipsiRSapL-2
Retrosplenial agranular cortex layer 5ipsiRSAL5-0.5
Retrosplenial agranular cortex layer 6ipsiRSAL6-0.5
Retrosplenial agranular cortex layer 3ipsiRSAL3-0.5
Retrosplenial granular cortex subdivisionsipsiRSGsu-0.5
Retrosplenial granular cortex a regionipsiRSGa3
Retrosplenial granular b cortex layer 3ipsiRSGb31
Retrosplenial granular b cortex layer 2ipsiRSGb21
Retrosplenial granular b cortex layer 5aipsiRSGb5a-0.5
Retrosplenial granular b cortex layer 5cipsiRSGb5c1
Retrosplenial granular b cortex layer 6bipsiRSGb6b1
Limbic regionsipsiLR-0.5
Anterior cingulate cortex layer 2ipsiACCL2-0.5
Anterior cingulate cortex layer 3ipsiACCL3-0.5
Anterior cingulate cortex layer 5ipsiACCL5-0.5
Dorsal anterior cingulate cortexipsiDACC3
Ventral anterior cingulate cortexipsiVACC3
Prelimbic cortexipsiPrL2
Prelimbic cortex caudal partipsiPrLc-0.5
Infralimbic cortexipsiIL2
Parietal cortex posterior areaipsiParP0
Temporal cortexipsiTE2.5
Temporal association area 2ipsiTe23
Temporal association area 3 ventrocaudal portionipsiTe3vc0.5
Auditory regionsipsiAU0
Primary auditory cortexipsiAu11.5
Ventral auditory areasipsiAUDv0
Agranular insular cortex dorsal partipsiAID0
Agranular insular cortex posterior partipsiAIP0
Agranular insular cortex ventral partipsiAIV0
Gustatory dysgranular insular cortexipsiDIg0
Granular insular cortexipsiGI0
Perirhinal cortexipsiA353
Ectorhinal cortexipsiA363
Subrhinal areaipsiSuRCx3
Motoric regionsipsiM2
Lateral agranular prefrontal cortexipsiAGl1.5
Whisker motor cortex subfieldsipsiWMCxS-0.5
Medial agranular prefrontal cortexipsiAGm1.5
Medial agranular prefrontal cortex rostral partipsirAGm-0.5
Primary somatosensory cortexipsiS11
Caudal medial part of the primary somatosensory cortex barrel fieldipsiS1BFCM1
Secondary somatosensory cortexipsiS20
Visual regionsipsiVR1
Primary visual cortexipsiV10.5
Secondary visual cortexipsiV20.5
Secondary visual cortex medial area medial partipsiV2MMe-0.5
Secondary visual cortex lateral areaipsiV2L0
Primary visual cortex binocular areaipsiV1B2
Intermediolateral cortical visual areaipsiVISli1
Laterolateral cortical visual areaipsiVISll0
Mediolateral cortical visual areaipsiVISlm0
Posterolateral cortical visual areaipsiVISpl1
Rostrolateral cortical visual areaipsiVISrl0
Anterior part of the medial extrastriate cortexipsiVISMA3
Anteromedial cortical visual areaipsiVISam2
Posterior part of the medial extrastriate cortexipsiVISMP3
Lateral orbital cortexipsiLO1.5
Ventral orbital cortexipsiVO0
Ventrolateral orbital areaipsiVLO2
Dorsal geniculate nucleus lateral partipsiDLGl2
Accessory olfactory bulbipsiAOB0
Olfactory bulb A16ipsiMOB0
Anterior olfactory nucleusipsiAON0
Dorsal tegmental nucleus lateral partcontraDLTN2
Pedunculopontine tegmental nucleuscontraPPTg2
Pontine reticular nucleuscontraPRN0
Dorsal raphe nucleuscontraDR2
Medial mammillary nucleus lateral partcontraML2
Amygdaloid complexcontraAC0
Anterior amygdaloid area lateral partcontraAAL1
Anterior part of the claustrumcontraACl1.5
Central part of claustrumcontraCeCl0.5
Ventromedial portion of the dorsal claustrumcontraDClvm1
Lateral part of claustrumcontraClL0.5
Posterior part of the claustrumcontraClP0.5
Neurons of claustrum along the external capsulecontraClnexcap1.5
Retrosplenial granular cortex a regioncontraRSGa-0.5
Subrhinal areacontraSuRCx1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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