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Rat connectome



Primary somatosensory cortex face region left


Abbreviation
S1FR
Color       
Superior regionsPrimary somatosensory cortex

SynonymsAbbr.Language
Primary somatosensory cortex face regionS1FR 
Primary somatosensory cortex head region Eng
Primary somatosensory cortex orofacial region Eng
Sensory face cortex Lat
Sensory face area Lat
Face somatosensory area of the cerebral cortex Eng
Primary somatosensory cortex facial area Eng

SubregionsSide
Caudal portion of the face somatosensory cortexleft
Primary somatosensory cortex face region frontal nerve arealeft
Primary somatosensory cortex face region inferior orbital arealeft
Primary somatosensory cortex face region lingual nerve arealeft
Primary somatosensory cortex face region mental arealeft
Primary somatosensory cortex jaw regionleft
Primary somatosensory cortex jaw region oral surfaceleft
Primary somatosensory cortex lower lip regionleft
Primary somatosensory cortex mouth regionleft
Primary somatosensory cortex nose regionleft
Primary somatosensory cortex upper lip regionleft
Anterior part of head region of the primary somatosensory cortexleft
Primary somatosensory cortex face region layersleft

Output to

NameSideAbbr.WeightDetails
Dorsomedial pontine nucleusipsiDMPn3
Red nucleus dorsalipsiRDO-0.5
Optic nerve layer of the superior colliculusipsiOp0
Superficial gray layer of the superior colliculusipsiSuG0
Superior colliculus zonal layeripsiSCzo0
Anterior part of superior colliculus intermediate layersipsiASCi3
Mediolateral extent of the extreme anterior pole the of superior colliculus intermediate layersipsiMLEASCi3
Intermediate gray layer of the lateral two thirds of the anteriorposterior superior colliculusipsiInGLttAP3
Intermediate gray layer of the lateral superior colliculusipsiInLG3
Deep gray layer of the anterior superior colliculusipsiDpGA1
Deep gray layer of the lateral two-thirds of the anteriorposterior superior colliculusipsiDpLttAPG1
Deep gray layer of the lateral tow-thirds of the extreme anterior pole of the superior colliculusipsiDpGLttepA1
Deep gray layer of the lateral superior colliculusipsiDpLG1
Superior colliculus medial boundaryipsimbSC0
Tegmental areaipsiTGA-2
Peripeduncular nucleus dorsal partipsiPPdo1
Ventral peduncular region of the rostral basilar ponsipsiVpRBaP-0.5
Central part of the ventral region of the rostral basilar ponsipsiCVRBaP-0.5
Medial area of ponsipsiMeP-0.5
Dorsal peduncular zoneipsiDPeZ3
Pontine nuclei lateral partipsiBPNL1
Pontine nuclei rostral partipsiBPNr-0.5
Pontine nuclei rostrocaudal partipsiBPNrc3
Pontine nucleus medial partipsiBPNm3
Lateral protion of the medial pontine nucleusipsiLpBPNv3
Pontine nucleus ventral partipsiBPNv3
Ventral portion of the ventral pontine nucleus ventral to the cerebral peduncleipsiVVcBPNv1
Lateral position of the ventral region of the ventral part of the pontine nucleusipsiLVBPNv1
Medial position of the ventral region of the ventral part of the pontine nucleusipsiMVBPNv1
Lateral part of the ventral pontine nucleusipsiBPNLV-0.5
Reticular systemipsiRF-2
Arcuate nucleusipsiArc3
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleusipsiPC1
Posterior thalamic nuclear groupipsiPo1
Ventrolateral thalamic nucleusipsiVL3
Ventrobasal complexipsiVB4
Arcuate nuclei of ventrobasal complexipsiAVB4
Ventromedial thalamic nucleusipsiVM1
Reticular thalamic nucleus caudal partipsiRtc3
Cerebral peduncle basal partipsicp-2
Lateral one third of the cerebral peduncleipsiLotcp-0.5
Midportion of the cerebral peduncleipsimpcp3
Ventrolateral aspect of the cerebral peduncleipsivlcp3
Lateral part of the medial parietal cortex layer 1ipsiLMPtAL13
Lateral part of the medial parietal cortex layer 2ipsiLMPtAL23
Lateral part of the medial parietal cortex layer 3ipsiLMPtAL33
Lateral part of the medial parietal cortex layer 4ipsiLMPtAL43
Lateral part of the medial parietal cortex layer 5ipsiLMPtAL53
Lateral part of the medial parietal cortex layer 6ipsiLMPtAL63
Parietal cortex ventral area layer 5ipsiParVL52
Parietal cortex ventral area layer 6ipsiParVL62
Parietal cortex ventral area layer 4ipsiParVL41.5
Parietal cortex ventral area layer 1ipsiParVL10.5
Parietal cortex ventral area layer 2ipsiParVL20.5
Parietal cortex ventral area layer 3ipsiParVL31.5
Granular insular cortex layer 4ipsiGIL42
Granular insular cortex layer 3ipsiGIL32
Granular insular cortex layer 2ipsiGIL22
Granular insular cortex layer 5ipsiGIL53
Granular insular cortex layer 6ipsiGIL62
Ectorhinal cortex layer 2ipsiA36L2-0.5
Ectorhinal cortex layer 3ipsiA36L3-0.5
Ectorhinal cortex layer 4ipsiA36L4-0.5
Ectorhinal cortex layer 5ipsiA36L5-0.5
Ectorhinal cortex layer 6ipsiA36L6-0.5
Rostral forelimb motor areaipsiRFMA2
Primary somatosensory cortex lateral part of the central intercalated zoneipsiS1iZLce-0.5
Primary somatosensory cortex proximal forelimb regionipsiS1FLP-0.5
Primary somatosensory cortex proximal hindlimb regionipsiS1HLP-0.5
Lateral border of primary somatosensory cortex close to rhinal sulcusipsiS1LB3
Secondary somatosensory cortex layer 1ipsiS2L11.5
Secondary somatosensory cortex layer 2ipsiS2L21.5
Secondary somatosensory cortex layer 3ipsiS2L32.5
Secondary somatosensory cortex layer 4ipsiS2L42.5
Secondary somatosensory cortex layer 5ipsiS2L53
Secondary somatosensory cortex layer 6ipsiS2L63
Secondary somatosensory cortex lateral areaipsiS2LA-0.5
Medial pontine nucleuscontraMPoN2
PonscontraP-0.5
Reticular systemcontraRF4
Medulla oblongatacontraMeOb-0.5
Nuclei of the trigeminal complexcontraN5S-0.5
Principal sensory trigeminal nucleus lingual partcontraPr5L3
Spinal trigeminal nucleus dorsal partcontraSp5ncD4
Central medial thalamic nucleuscontraCM1
Lateral parietal association cortexcontraLPtA3
Granular insular cortex layer 4contraGIL4-0.5
Granular insular cortex layer 3contraGIL3-0.5
Granular insular cortex layer 2contraGIL2-0.5
Granular insular cortex layer 5contraGIL5-0.5
Granular insular cortex layer 6contraGIL6-0.5
Primary somatosensory cortexcontraS13

Input from

NameSideAbbr.WeightDetails
Basal nucleus MeynertipsiB-3
Basal nucleus Meynert caudal two thirdsipsiBcatt3
Basal nucleus Meynert most caudal partipsiBmca1
Basal nucleus Meynert intermediate divisonipsiBim1
Posterior thalamic nuclear groupipsiPo-0.5
Posterior thalamic nuclear group anterior partipsiPoA3
Ventrobasal complexipsiVB3
Ventromedial thalamic nucleusipsiVM1
Intralaminar nucleiipsiILN1
Lateral part of the medial parietal cortex layer 2ipsiLMPtAL23
Lateral part of the medial parietal cortex layer 3ipsiLMPtAL33
Lateral part of the medial parietal cortex layer 4ipsiLMPtAL43
Lateral part of the medial parietal cortex layer 5ipsiLMPtAL53
Lateral part of the medial parietal cortex layer 6ipsiLMPtAL63
Parietal cortex ventral area layer 5ipsiParVL52
Parietal cortex ventral area layer 6ipsiParVL62
Parietal cortex ventral area layer 4ipsiParVL41.5
Parietal cortex ventral area layer 1ipsiParVL10.5
Parietal cortex ventral area layer 2ipsiParVL20.5
Parietal cortex ventral area layer 3ipsiParVL31.5
Granular insular cortex layer 4ipsiGIL42
Granular insular cortex layer 3ipsiGIL32
Granular insular cortex layer 2ipsiGIL22
Granular insular cortex layer 5ipsiGIL53
Granular insular cortex layer 6ipsiGIL62
Ectorhinal cortex layer 2ipsiA36L2-0.5
Ectorhinal cortex layer 3ipsiA36L33
Ectorhinal cortex layer 4ipsiA36L4-0.5
Ectorhinal cortex layer 5ipsiA36L53
Ectorhinal cortex layer 6ipsiA36L6-0.5
Primary somatosensory cortex lateral part of the central intercalated zoneipsiS1iZLce-0.5
Lateral border of primary somatosensory cortexipsiS1Lab3
Primary somatosensory cortex proximal forelimb regionipsiS1FLP-0.5
Primary somatosensory cortex proximal hindlimb regionipsiS1HLP-0.5
Secondary somatosensory cortex layer 1ipsiS2L11.5
Secondary somatosensory cortex layer 2ipsiS2L21.5
Secondary somatosensory cortex layer 3ipsiS2L32.5
Secondary somatosensory cortex layer 4ipsiS2L42.5
Secondary somatosensory cortex layer 5ipsiS2L53
Secondary somatosensory cortex layer 6ipsiS2L63
Secondary somatosensory cortex lateral areaipsiS2LA-0.5
Primary visual cortexipsiV12
Lateral parietal association cortexcontraLPtA3
Granular insular cortex layer 4contraGIL4-0.5
Granular insular cortex layer 3contraGIL3-0.5
Granular insular cortex layer 2contraGIL2-0.5
Granular insular cortex layer 5contraGIL5-0.5
Granular insular cortex layer 6contraGIL6-0.5
Primary somatosensory cortexcontraS13

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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