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Rat connectome



Secondary somatosensory cortex layer 6 left


Abbreviation
S2L6
Color       
Superior regionsInfragranular layers of secondary somatosensory cortex

SynonymsAbbr.Language
Secondary somatosensory cortex layer 6S2L6 

SubregionsSide
Secondary somatosensory cortex layer 6 aleft
Secondary somatosensory cortex layer 6 bleft

Output to

NameSideAbbr.WeightDetails
MyelencephalonipsiMYC4
Arcuate nucleusipsiArc-0.5
ThalamusipsiT2
Dorsal thalamusipsiDOR-0.5
Anterior group of the dorsal thalamusipsiATN3
Posterior thalamic nuclear groupipsiPo-0.5
Posterior thalamic nuclear group dorsal partipsiPoDo3
Mediodorsal thalamic nucleus central partipsiMDC3
Mediodorsal thalamic nucleus lateral partipsiMDL1
Ventrolateral thalamic nucleusipsiVL3
Ventrobasal complexipsiVB3
Arcuate nuclei of ventrobasal complexipsiAVB3
External nucleus of ventrobasal complexipsiEVB3
Ventral posterolateral thalamic nucleusipsiVPL2
Ventral posteromedial thalamic nucleusipsiVPM3
Ventral part of the ventral posteromedial thalamic nucleusipsiVPMvL-0.5
Ventrobasal complex posterior partipsiVBp3
Intralaminar nucleiipsiILN-0.5
Lateral posterior thalamic nucleusipsiLP3
Reticular thalamic nucleusipsiRt4
Ventral medial nucleus of the thalamusipsiVMT-0.5
Zona incertaipsiZI-0.5
Caudate putamenipsiCPu2
Dorsal striatumipsiCPud2
Lateral agranular prefrontal cortexipsiAGl3
Forelimb motor cortexipsiFMCx2.5
Primary somatosensory cortexipsiS13
Primary somatosensory cortex barrel fieldipsiS1BF3
Primary somatosensory cortex face regionipsiS1FR3
Primary somatosensory cortex upper jaw regionipsiS1uJ3
Primary somatosensory cortex lower lip regionipsiS1LL3
Primary somatosensory cortex upper lip regionipsiS1ULp3
Primary somatosensory cortex forelimb regionipsiS1FL2
Primary somatosensory cortex forelimb region forepawipsiS1FP3
Primary somatosensory cortex forelimb digit regionipsiS1FLd1.5
Primary somatosensory cortex proximal forelimb regionipsiS1FLP2
Primary somatosensory cortex hindlimb regionipsiS1HL1
Primary somatosensory cortex proximal leg regionipsiS1HLpLe2
Primary somatosensory cortex distal hindlimb regionipsiS1HLD3
Primary somatosensory cortex proximal hindlimb regionipsiS1HLP3
Primary somatosensory cortex lower trunk regionipsiS1LTr2
Secondary somatosensory cortex layer 3ipsiS2L33
Secondary somatosensory cortex layer 5bipsiS2L5b3
Lateral geniculate complexipsiLG3
Medial geniculate nucleusipsiMG3
Visceral dysgranular insular cortexcontraDIv2
Primary somatosensory cortexcontraS13
Primary somatosensory cortex upper jaw regioncontraS1uJ-0.5
Primary somatosensory cortex periangular zone arround barrel fieldscontraS1pg3
Secondary somatosensory cortexcontraS23

Input from

NameSideAbbr.WeightDetails
Gigantocellular reticular nucleusipsiGi1
Paracentral thalamic nucleusipsiPC2
Dorsal division of the lateral parafascicular thalamic nucleusipsiPFDL1.5
Ventral posteromedial thalamic nucleusipsiVPM1
Border of frontal cortex 2ipsiFr2B3
Dysgranular insular cortexipsiDI-0.5
Granular insular cortex posterior partipsiGIpo0.5
Primary somatosensory cortexipsiS1-0.5
Primary somatosensory cortex barrel fieldipsiS1BF3
Primary somatosensory cortex face regionipsiS1FR3
Primary somatosensory cortex upper jaw regionipsiS1uJ3
Primary somatosensory cortex lower lip regionipsiS1LL3
Primary somatosensory cortex upper lip regionipsiS1ULp3
Primary somatosensory cortex forelimb regionipsiS1FL2
Primary somatosensory cortex forelimb region forepawipsiS1FP2
Primary somatosensory cortex forelimb digit regionipsiS1FLd1.5
Primary somatosensory cortex proximal forelimb regionipsiS1FLP2
Primary somatosensory cortex hindlimb regionipsiS1HL1
Primary somatosensory cortex proximal leg regionipsiS1HLpLe2
Primary somatosensory cortex distal hindlimb regionipsiS1HLD3
Primary somatosensory cortex proximal hindlimb regionipsiS1HLP3
Primary somatosensory cortex lower trunk regionipsiS1LTr2
Anterolateral area of subdivision 18a in lateral extrastriate cortexipsiALV2L-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortexipsiLMV2L-0.5
Anterior portion of the anterolateral part of the lateral extrastriate cortexipsiVISLaLA3
Lateromedial part of the lateral extrastriate cortexipsiVISLLM1
Primary somatosensory cortexcontraS12
Primary somatosensory cortex upper jaw regioncontraS1uJ-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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