University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Reticular thalamic nucleus caudal part left


Abbreviation
Rtc
Color       
Superior regionsReticular thalamic nucleus

SynonymsAbbr.Language
Reticular thalamic nucleus caudal partRtcEng
 TRNc 
 RTc 
 NRTc 
Caudal part of the reticular thalamic nucleus  
Reticular thalamic nucleus caudal pole Eng
Caudal reticular thalamic nucleus Eng

SubregionsSide
Dorsal part of the caudal reticular thalamic nucleusleft
Medial tier of the caudal part of the reticular thalamic nucleusleft
Middle part of the caudal reticular thalamic nucleusleft
Reticular thalamic nucleus caudal part internal lamellaleft
Reticular thalamic nucleus caudal part external lamellaleft
Extrteme caudal reticular thalamic nucleusleft
Caudal reticular nucleus of the thalamus posterior partleft
Dorsal part of the caudal reticular thalamic nucleusleft

Output to

NameSideAbbr.WeightDetails
Anterodorsal thalamic nucleus caudal partipsiADca1
Anteroventral thalamic nucleus caudal partipsiAVCa1
Central medial thalamic nucleusipsiCM2
Mediodorsal thalamic nucleus central partipsiMDC-10
Mediodorsal thalamic nucleus lateral partipsiMDL-10
Mediodorsal thalamic nucleus medial partipsiMDM-10
Midline group of the dorsal thalamusipsiMTN0.5
Ventrolateral thalamic nucleus caudoventral partipsiVLCV-0.5
Caudoventral ventrolateral thalamic nucleus medial partipsiVLCVm-0.5
Caudoventral ventrolateral thalamic nucleus lateral partipsiVLCVL-0.5
Lateral posterior nucleus of the visual dorsal thalamic nucleusipsiLPviDOR-0.5
Ventral pallidum dorsolateral partipsiVPdl-10

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-10
Peduncularpontine nucleusipsiPPN-0.5
Substantia nigra compact partipsiSNC-10
Substantia nigra reticular part dorsolateral tieripsiSNRDL1
Retrorubral nucleusipsiRR-10
Laterodorsal tegmental nucleusipsiLDTg-0.5
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Pontomesencephalic grayipsiPoMG-0.5
Parabrachial nucleusipsiPB-10
Lateral parabrachial nucleusipsiLPB1
Medial vestibular nucleusipsiMVe1
Caudal part of basal forebrainipsiCBAF2
Diagonal band of BrocaipsiDBB-10
Basal nucleus MeynertipsiB2
Substantia innominataipsiSI2
Preoptic regionipsiPREO-10
Tuberal nucleusipsiTU1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-10
Ventromedial hypothalamic nucleusipsiVMH-10
Ventromedial hypothalamic nucleus anterior partipsiVMHA1
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL-0.5
A8 dopamine cells retrorubral groupipsiRRF-10
ThalamusipsiT3
Anterodorsal thalamic nucleusipsiAD-10
Anteroventral thalamic nucleusipsiAV-10
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL1
Mediodorsal thalamic nucleusipsiMD1
Mediodorsal thalamic nucleus lateral partipsiMDL-10
Ventral anterior-lateral complex of the thalamusipsiVAL-10
Ventrolateral thalamic nucleusipsiVL-10
Ventral posterolateral thalamic nucleusipsiVPL3
Ventral posteromedial thalamic nucleusipsiVPM3
Ventromedial thalamic nucleusipsiVM3
Lateral posterior nucleus of the visual dorsal thalamic nucleusipsiLPviDOR-0.5
Intralaminar nucleiipsiILN0.5
Lateral posterior thalamic nucleusipsiLP3
Laterodorsal thalamic nucleusipsiLD3
Zona incertaipsiZI2
Zona incerta caudal partipsiZIC1
Basolateral amygdaloid nucleusipsiBL-10
Bed nucleus of the stria terminalisipsiBST-10
Medial amygdaloid nucleusipsiMe-10
ClaustrumipsiCl-10
Globus pallidusipsiGP-10
Medial globus pallidusipsiMGP-10
Ventral pallidum caudal partipsiVPc-10
Ventral pallidum lateral partipsiVPlp-10
Accumbens nucleus coreipsiAcbC-10
Caudate putamenipsiCPu-10
Subthalamic nucleusipsiSTh2
Entorhinal cortexipsiEnt-10
Piriform cortexipsiPir-10
Cingulate cortexipsiCg-10
Anterior cingulate cortex anterior part layer 5ipsiACCaL50
Anterior cingulate cortex layer 6ipsiACCL60
Cingulate cortex area 1ipsiCg10
Cingulate cortex area 2ipsiCg20
Lateral cingulate cortexipsiLCg1
Prelimbic cortexipsiPrL-10
Frontal cortex area 2ipsiFr20
Parietal cortex area 1 layer 6ipsiPar1L62
Parietal cortex area 2 layer 6ipsiPar2L62
Temporal association area 2 dorsal part layer 3ipsiTe2DL3-0.5
Temporal association area 2 dorsal part layer 4ipsiTe2DL4-0.5
Temporal association area 2 dorsal part layer 6ipsiTe2DL6-0.5
Caudal part of temporal association cortex 1 layer 3ipsiTecaL3-0.5
Caudal part of temporal association cortex 1 layer 4ipsiTecaL4-0.5
Caudal part of temporal association cortex 1 layer 6ipsiTecaL6-0.5
Dorsocaudal end of the temporal association cortex 1 layer 5ipsiTeADCL5-0.5
Dorsocaudal end of the temporal association cortex 1 layer 6ipsiTeADCL6-0.5
Temporal association cortex 1 layer 5ipsiTeAL5-0.5
Agranular insular cortexipsiAI-10
Sensory regionsipsiSR3
Primary somatosensory cortex face regionipsiS1FR3
Geniculate bodyipsiGB3
Lateral geniculate complexipsiLG2
Marginal zone of the medial geniculateipsiMZMG1
Medial geniculate nucleus medial partipsiMGM1
Olfactory tubercleipsiTuO-10
Substantia nigra reticular part dorsolateral tiercontraSNRDL0.5
Tuberal nucleuscontraTU0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA0.5
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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