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Rat connectome



Medial entorhinal cortex layer 1 right


Abbreviation
MEntLyL1
Color       
Superior regionsMedial entorhinal cortex superficial layers

SynonymsAbbr.Language
Medial entorhinal cortex layer 1MEntLyL1 
Medial entorhinal cortex molecular layerMEntLyL1Eng

SubregionsSide
Deep portion of layer 1 of the medial entorhinal cortexright
Medial entorhinal cortex layer 1 GABAergic interneuronsright
Superficial portion of layer 1 of the medial entorhinal cortexright

Output to

NameSideAbbr.WeightDetails
Presubiculum layer 2ipsiPrSL2-0.5
Presubiculum layer 3ipsiPrSL3-0.5
ParasubiculumipsiPaS0.5
Lateral entorhinal cortex layer 3ipsiLEntL3-0.5
Lateral entorhinal cortex layer 4ipsiLEntL4-0.5
Lateral entorhinal cortex layer 5ipsiLEntL5-0.5
Lateral entorhinal cortex layer 6ipsiLEntL6-0.5
Medial entorhinal cortex layer 1ipsiMEntLyL13
Medial entorhinal cortex layer 2bipsiMEntLyL2b3
Medial entorhinal cortex layer 3ipsiMEntLyL3-0.5
Medial entorhinal cortex layer 4ipsiMEntLyL4-0.5
Medial entorhinal cortex layer 5ipsiMEntLyL5-0.5
Medial entorhinal cortex layer 6ipsiMEntLyL6-0.5
Retrosplenial regionsipsiRS0.5
Postrhinal cortexipsiPOR2
Lateral septal nucleus intermediate partipsiLSI-0.5

Input from

NameSideAbbr.WeightDetails
PresubiculumcontraPrS3
Presubiculum dorsal part layer 3contraPrDL3-0.5
Presubiculum dorsal part layer 2contraPrDL2-0.5
Presubiculum layer 2contraPrSL21.5
Presubiculum layer 3contraPrSL33
Presubiculum layer 5contraPrSL51.5
Presubiculum layer 6contraPrSL61.5
Presubiculum middle levels layer 2contraPrSmiL2-0.5
Presubiculum middle levels layer 3contraPrSmiL3-0.5
Locus coeruleusipsiLC1
Anteromedial thalamic nucleus rostral partipsiAMr2
Reuniens thalamic nucleusipsiRe3
Nucleus reuniens rostral divisionipsiRER-0.5
Posterior amygdaloid nucleusipsiCOAp1
Field CA1 of hippocampusipsiCA11
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Subiculum dorsal part rostrocaudal extentipsiSdrc2
PresubiculumipsiPrS3
Distal protion of the presubiculumipsiPrSd3
Presubiculum dorsal part layer 3ipsiPrDL3-0.5
Presubiculum dorsal part layer 2ipsiPrDL2-0.5
Presubiculum layer 2ipsiPrSL23
Presubiculum layer 1ipsiPrSL1-0.5
Presubiculum layer 3ipsiPrSL33
Presubiculum deep layersipsiPrSDL3
Presubiculum layer 5ipsiPrSL5-0.5
Presubiculum layer 6ipsiPrSL6-0.5
Proximal portion of the presubiculumipsiPrSp0
Presubiculum middle levels layer 2ipsiPrSmiL2-0.5
Presubiculum middle levels layer 3ipsiPrSmiL3-0.5
ParasubiculumipsiPaS-0.5
Dorsal entorhinal cortex layer 2ipsiDEntL21
Dorsal entorhinal cortex layer 4ipsiDEntL41
Intermediate entorhinal cortex layer 2 spiny stellate neuronsipsiIEntL2ss-0.5
Lateral entorhinal cortexipsiLEnt-0.5
Lateral entorhinal cortex layer 2ipsiLEntL2-0.5
Lateral entorhinal cortex layer 3ipsiLEntL3-0.5
Lateral entorhinal cortex layer 4ipsiLEntL4-0.5
Lateral entorhinal cortex layer 5ipsiLEntL5-0.5
Lateral entorhinal cortex layer 6ipsiLEntL6-0.5
Medial entorhinal cortex layer 1ipsiMEntLyL13
Medial entorhinal cortex layer 2ipsiMEntLyL23
Medial entorhinal cortex layer 2 stellate neuronsipsiMEntLyL2st-0.5
Medial entorhinal cortex layer 2bipsiMEntLyL2b-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL3-0.5
Medial sector of layer 3 of the medial entorhinal cortexipsiMEntLyL3ms3
Medial entorhinal cortex layer 4ipsiMEntLyL4-0.5
Medial entorhinal cortex layer 5ipsiMEntLyL5-0.5
Medial entorhinal cortex deep layer 5ipsiMEntLyL5b-0.5
Medial entorhinal cortex layer 6ipsiMEntLyL63
Medial entorhinal cortex midtemporal level layer 4ipsiMEntmiL43
Entorhinal cortex layer 5ipsiEntL53
Lateral entorhinal cortex piriform cortex transition zoneipsiLEntPiTZ-0.5
Retrosplenial cortexipsiRSCx-0.5
Dorsal anterior cingulate cortex deep layersipsiDACCdL-0.5
Parietal cortex posterior area caudal partipsiParPC-0.5
Parietal cortex posterior area medial portionipsimPPC-0.5
Postrhinal cortexipsiPOR2
Postrhinal cortex layer 1ipsiPORL1-0.5
Postrhinal cortex layer 2ipsiPORL2-0.5
Postrhinal cortex layer 3ipsiPORL3-0.5
Postrhinal cortex layer 5ipsiPORL5-0.5
Primary somatosensory cortexipsiS1-0.5
Secondary visual cortex medial areaipsiV2M-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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