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Rat connectome



Presubiculum layer 5 right


Abbreviation
PrSL5
Color       
Superior regionsPresubiculum deep layers

SynonymsAbbr.Language
Presubiculum layer 5PrSL5 

SubregionsSide
Presubiculum layer 5 distal regionright
Presubiculum layer 5 proximal regionright
Presubiculum pyramidal cells of layer 5right

Output to

NameSideAbbr.WeightDetails
PresubiculumcontraPrS-0.5
Presubiculum layer 2contraPrSL20
Presubiculum layer 5contraPrSL50
ParasubiculumcontraPaS-0.5
Medial entorhinal cortex superficial layerscontraMEntLyS1.5
Medial entorhinal cortex layer 1contraMEntLyL11.5
Medial entorhinal cortex layer 2contraMEntLyL21.5
Medial entorhinal cortex layer 3contraMEntLyL31.5
Medial entorhinal cortex deep layerscontraMEntDLy1.5
Medial entorhinal cortex layer 5contraMEntLyL50
Medial entorhinal cortex layer 6contraMEntLyL60
Laterodorsal thalamic nucleusipsiLD2
Dentate gyrus molecular layeripsiDGmL-0.5
SubiculumipsiS-10
Subiculum temporal thirdipsiSTet1
Presubiculum layer 2ipsiPrSL22
Presubiculum layer 2 superficial partipsiPrSL2s-0.5
Presubiculum layer 1ipsiPrSL1-0.5
Presubiculum layer 1 pial surfaceipsiPrSL1ps-0.5
Presubiculum layer 3ipsiPrSL33
Presubiculum layer 4ipsiPrSL43
Presubiculum layer 5ipsiPrSL51
Presubiculum layer 6ipsiPrSL6-0.5
ParasubiculumipsiPaS-0.5
Parasubiculum layer 1ipsiPaSL1-0.5
Parasubiculum layer 3ipsiPaSL3-0.5
Parasubiculum layer 5ipsiPaSL5-0.5
Parasubiculum layer 6ipsiPaSL6-0.5
Parasubiculum intermediate partipsiPaSim-0.5
PostsubiculumipsiPost1.5
Lateral entorhinal cortex layer 1ipsiLEntL1-0.5
Lateral entorhinal cortex layer 4ipsiLEntL4-0.5
Lateral entorhinal cortex layer 5ipsiLEntL5-0.5
Lateral entorhinal cortex layer 6ipsiLEntL6-0.5
Medial entorhinal cortexipsiMEnt-10
Medial entorhinal cortex layer 1ipsiMEntLyL1-0.5
Superficial portion of layer 1 of the medial entorhinal cortexipsiMEntLyL1S3
Medial entorhinal cortex layer 2ipsiMEntLyL2-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL33
Medial entorhinal cortex layer 5ipsiMEntLyL53
Medial entorhinal cortex layer 6ipsiMEntLyL63
Retrosplenial agranular cortexipsiRSA-10
Retrosplenial granular cortexipsiRSGra3
Retrosplenial granular cortex a regionipsiRSGa-0.5
Septal regionipsiSER2
Septofimbrial nucleusipsiSFi2
Triangular septal nucleusipsiTS2

Input from

NameSideAbbr.WeightDetails
Presubiculum layer 2contraPrSL2-0.5
Presubiculum layer 3contraPrSL30
Presubiculum layer 4contraPrSL40
Presubiculum layer 5contraPrSL50
Presubiculum midseptal levelcontraPrSms-0.5
Parasubiculum intermediate partcontraPaSim1
Retrosplenial granular a cortex middle part layer 2contraRSGaMiL2-0.5
Retrosplenial granular a cortex middle part layer 3contraRSGaMiL3-0.5
Retrosplenial granular a cortex middle part layer 4contraRSGaMiL4-0.5
Retrosplenial granular a cortex middle part layer 5contraRSGaMiL5-0.5
Retrosplenial granular a cortex middle part layer 6contraRSGaMiL6-0.5
Anterodorsal thalamic nucleus dorsomedial partipsiADdm2
Anterodorsal thalamic nucleus rostrodorsal tipipsiADrd1.5
Anterodorsal thalamic nucleus rostroventral tipipsiADrv1
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Subiculum distal partipsiSdi-0.5
Molecular layer of the subiculumipsiSumo-0.5
Subiculum stratum pyramidaleipsiSupyr-0.5
Presubiculum layer 2ipsiPrSL23
Presubiculum layer 1ipsiPrSL1-0.5
Presubiculum layer 3ipsiPrSL33
Presubiculum layer 4ipsiPrSL41
Presubiculum deep layersipsiPrSDL3
Presubiculum layer 5ipsiPrSL51
Presubiculum pyramidal cells of layer 5ipsiPrSL5py3
Presubiculum layer 6ipsiPrSL6-0.5
Presubiculum temporal part layer 2ipsiPrSTL2-0.5
Presubiculum temporal part layer 3ipsiPrSTL3-0.5
Presubiculum midseptal levelipsiPrSms4
Presubiculum midtemporal level layer 3ipsiPrSmtL30.5
Parasubiculum layer 2ipsiPaSL2-0.5
Parasubiculum layer 3ipsiPaSL3-0.5
Parasubiculum layer 5ipsiPaSL5-0.5
Parasubiculum pyramidal cells of layer 5ipsiPaSL5py3
Parasubiculum stellate cells of layer 5ipsiPaSL5st-0.5
Lateral entorhinal cortexipsiLEnt2
Lateral entorhinal cortex layer 2ipsiLEntL2-0.5
Lateral entorhinal cortex layer 3ipsiLEntL3-0.5
Lateral entorhinal cortex layer 4ipsiLEntL4-0.5
Lateral entorhinal cortex layer 5ipsiLEntL5-0.5
Lateral entorhinal cortex layer 6ipsiLEntL6-0.5
Medial entorhinal cortex layer 6ipsiMEntLyL61
Entorhinal cortex layer 5 pyramidal neuronsipsiEntL5py-0.5
Retrosplenial cortexipsiRSCx-0.5
Retrosplenial granular a cortex middle part layer 2ipsiRSGaMiL2-0.5
Retrosplenial granular a cortex middle part layer 3ipsiRSGaMiL3-0.5
Retrosplenial granular a cortex middle part layer 4ipsiRSGaMiL4-0.5
Retrosplenial granular a cortex middle part layer 5ipsiRSGaMiL5-0.5
Retrosplenial granular a cortex middle part layer 6ipsiRSGaMiL6-0.5
Area 29 caudal partipsiA29ca-0.5
Rostral half of area 30ipsiA30rh-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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