University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Olfactory cortex right


Abbreviation
Ocx
Color       
Superior regionsOlfactory bulb A16

SynonymsAbbr.Language
 OLF 
Primary olfactory cortex Eng
Olfactory cortexOcxEng

SubregionsSide
Anterior olfactory cortexright
Olfactory cortex cell populationsright
Olfactory cortex layersright
Posterior olfactory cortexright
Olfactory cortex caudal partright
Rostral olfactory cortexright
Middle tufted cells of the olfactory cortexright
Olfactory cortex dorsal partright
Olfactory cortex lateral partright
Olfactory cortex medial partright
Dorsolateral olfactory cortexright
Distal part of the olfactory cortexright

Output to

NameSideAbbr.WeightDetails
Olfactory bulb A16contraMOB0
Cervical segment 1contraCS10
Cervical segment 2contraCS20
Ventral tegmental area A10ipsiVTA-0.5
Nucleus of the solitary tractipsiSol0
Basal forebrainipsiBAF-0.5
Substantia innominataipsiSI1
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus lateral partipsiMDL0
Mediodorsal thalamic nucleus medial partipsiMDM1
Mediodorsal thalamic nucleus posterior partipsiMDP0
Submedius thalamic nucleusipsiSub2
Submedius thalamic nucleus lateral partipsiSubL0
Submedius thalamic nucleus posterior partipsiSubPo0
Amygdaloid complexipsiAC-0.5
Interstitial nucleus of the posterior limb of the anterior commissure caudolateral partipsiIPACcl2
Interstitial nucleus of the posterior limb of the anterior commissure rostral partipsiIPACR2
Posterior amygdaloid nucleusipsiCOAp-0.5
Medial extreme of the caudal periamygdaloid cortexipsiMePACC-0.5
Accumbens nucleusipsiAc2
Accumbens nucleus posterolateral partipsiAcbpl2
Lateral nucleus accumbensipsiAcl2
Caudate putamenipsiCPu-0.5
Posterior part of the supragenual part of the prefrontal cortexipsipsgPFC-2
Olfactory bulb A16ipsiMOB3
Cervical segment 1ipsiCS10
Cervical segment 2ipsiCS20

Input from

NameSideAbbr.WeightDetails
Central graycontraCG0.5
Olfactory bulb A16contraMOB-0.5
Central grayipsiCG1
Periaqueductal gray dorsal partipsiPAGd0
Periaqueductal gray medial partipsiPAGm2
Ventrolateral periaqueductal grayipsiVLPAG2
Substantia nigra A9ipsiSN-0.5
Ventral tegmental area A10ipsiVTA-0.5
Laterodorsal tegmental nucleusipsiLDTg2
Dorsal tegmental nucleusipsiDTg1
Locus coeruleusipsiLC1
Reticular systemipsiRF-0.5
Raphe nucleiipsiRAN1
Dorsal raphe nucleusipsiDR2
Medial raphe nucleusipsiMeR2
Ventral portion of the raphe nucleiipsiRANV2
Nucleus of the horizontal limb of the diagonal band dorsal partipsiHDBd1
Nucleus of the horizontal limb of the diagonal band rostral partipsiRPHDB-0.5
Nucleus of the horizontal limb of the diagonal band ventral partipsiHDBv2
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Ventral tenia tectaipsiVTT1
Anterior hypothalamic area posterior partipsiAHAP0
Submedius thalamic nucleusipsiSub0
Basal nucleus magnocellular partipsiBmc1
Anterior cortical amygdaloid nucleusipsiACo3
Posterior prepiriform cortexipsiPPPC-0.5
Olfactory bulb A16ipsiMOB2
Tufted cells of the glomerular layer of the olfactory bulbipsiOBgloTC-0.5
Mitral cells of the olfactory bulbipsiMiC3
Anterior olfactory nucleusipsiAON-0.5
Olfactory tubercleipsiTuO-0.5
Olfactory tubercle molecular layeripsiTuOLaMo0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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