University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



3d ventricle right


Abbreviation
3V
Color       
Superior regionsVentricle

SynonymsAbbr.Language
3d ventricle3VEng
Third ventricle Eng

SubregionsSide
Anteroventral ventricular regionright
Caudal 3d ventricleright
Choroid plexus 3d ventricleright
Dorsal 3d ventricleright
Ependyma of the 3d ventricleright
Rostral part of the 3d ventricleright
Top of 3d ventricleright
Anterior edge of the 3d ventricleright
Supraependymal terminals of 3d ventricleright
Subependymal terminals under the ependyma of the 3d ventricleright
Anterior 3d ventricleright
Ventral 3d ventricleright
Near the wall of the third ventricleright
Periventricular zone of the third ventricleright
Bottom of the 3d ventricleright
Rostral 3d ventricleright
Septum of the 3d ventricleright
3d ventricle ependymal layerright
Midline dorsal to caudal half of third ventricleright

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Paraventricular nucleus medial partipsiPame-1
Mediodorsal thalamic nucleusipsiMD-2
3d ventricleipsi3V-1

Input from

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal gray caudal partipsiPAGvlc-0.5
Ventrolateral periaqueductal gray rostral partipsiPAGvlr-2
Cuneiforme nucleusipsiCnF-2
Cervical trunk of the glossopharyngeal nerveipsi9nct3
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus dorsomedian partipsiDRdmm3
Dorsal raphe nucleus lateral wingipsiDRlw0
Medial dorsal raphe nucleus level 3ipsiDRNML3-0.5
Medial dorsal raphe nucleus level 4ipsiDRNML4-0.5
Meidal dorsal raphe nucleus level 5ipsiDRNML5-0.5
Dorsal raphe nucleus median partipsiDRM-0.5
Dorsal raphe nucleus ventromedian partipsiDRvmm2
Median raphe nucleusipsiMnR1
Median eminenceipsiME3
Tuberomammillary nucleusipsiTuM2
Dorsal tuberomammillary nucleusipsiDTM1
HypothalamusipsiHYPO1
Lateral hypothalamic areaipsiLH2
Subparaventricular zone ventral partipsiSuPZv1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleusipsiPa1
Paraventricular nucleus medial partipsiPame2
Periventricular hypothalamic nucleusipsiPe2
Suprachiasmatic nucleusipsiSCh2
Suprachiasmatic nucleus dorsal divisionipsiSChd-2
Suprachiasmatic nucleus ventral divisionipsiSChv-2
Rostral hypothalamusipsiRHYPO-0.5
Dorsolateral part of the subfornical organipsiSFODL0
Ventromedial subfornical organipsiSFOVM0
Ependymal surface of the subfornical organipsiSFOES-0.5
Ependymal part of the thalamic surface of the subfornical organipsiSFOEST-0.5
Medial habenular nucleusipsiMHb-0.5
Anterior basolateral nucleusipsiBLA3
Anterior basolateral nucleus medial partipsiBLAM-0.5
Nucleus of the lateral olfactory tractipsiLOT-0.5
Medial amygdaloid nucleusipsiMe-0.5
Anterior commissureipsiac-2
Lateral septal nucleus mediolateral partipsiLSML1
3d ventricleipsi3V-1
Caudal 3d ventricleipsic3V-0.5
Ependyma of the 3d ventricleipsie3V3
Region around the rostral part of the 3d ventricleipsiRR3V-0.5
4th ventricleipsi4V-1
Ependymal layer of the 4th ventricleipsi4Vep3
AqueductipsiAq-0.5
Ependyma in central aqueductipsiAqCeE-1
Ependymal layer of the cerebral aqueductipsiAqEp3
Ependyma and subependymal layeripsiE1.5
Region around the interventricular foramenipsiraIVF-0.5
Lateral ventricle ventral partipsiLVv2.5
Lateral ventricle ventral part ependymal wallipsiLVve-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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