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Rat connectome



Ventrolateral periaqueductal gray caudal part right


Abbreviation
PAGvlc
Color       
Superior regionsVentrolateral periaqueductal gray

SynonymsAbbr.Language
Ventrolateral periaqueductal gray caudal partPAGvlcEng
Caudal ventrolateral periaqueductal gray Eng

Output to

NameSideAbbr.WeightDetails
Ventral nucleus of the lateral lemniscuscontraVLL0
Paralemniscal nucleuscontraPL1
Parabigeminal nucleuscontraPBG0.5
Periparabigeminal areacontraPPBGa0
Periaqueductal graycontraPAG3
Dorsolateral periaqueductal graycontraDLPAG0.5
Periaqueductal gray caudal partcontraPAGc0
Periaqueductal gray rostral partcontraPAGR2
Ventrolateral periaqueductal graycontraVLPAG1
External cortex of the inferior colliculuscontraECIC0.5
Nucleus of the brachium of the inferior colliculuscontraBIC0
Superior colliculus deep layerscontraSCd1
Peduncularpontine nucleuscontraPPN0.5
Substantia nigra compact partcontraSNC0.5
Substantia nigra lateral partcontraSNL0.5
Substantia nigra reticular partcontraSNR2
Ventral tegmental area A10contraVTA1
Laterodorsal tegmental nucleuscontraLDTg0.5
Dorsal tegmental nucleus lateral partcontraDLTN1
Interposed cerebellar nucleicontraICN0.5
Lateral cerebellar nucleuscontraCERL0
Medial cerebellar nucleuscontraMed0
A5 noradrenaline cellscontraA50
Barringtons nucleuscontraBar0.5
Locus coeruleuscontraLC0.5
Reticulotegmental nucleuscontraRETn0.5
Prepositus nucleuscontraPr0.5
Caudoventrolateral reticular nucleuscontraCVLR0.5
Rostroventrolateral reticular nucleuscontraRVL1
Nucleus reticularis subcuneiformiscontraRScf0
Pontine reticular nucleuscontraPRN-2
Pontine reticular nucleus oral partcontraPnO2
Pontine reticular nucleus caudal partcontraPNC0.5
Pontine reticular nucleus caudal part alphacontraPnOca0.5
Cuneiforme nucleuscontraCnF2
Lateral parabrachial nucleuscontraLPB0.5
Parabrachial nucleus medialcontraPBnMe0.5
Gigantocellular reticular nucleuscontraGi0
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Medullary reticular nucleus dorsal partcontraMdDd-2
Ventral medullary reticular formationcontraVMurF0
Parvicellular reticular nucleuscontraPCRt0.5
Subcoeruleus nucleuscontraSubC0.5
Subcoeruleus nucleus alpha partcontraSubCA0.5
Subcoeruleus nucleus dorsal partcontraSubCD0.5
Subcoeruleus nucleus ventral partcontraSubCV0.5
Supragenual nucleuscontraSGe0.5
Ambiguus nucleuscontraAmb0.5
Spinal trigeminal nucleuscontraSp5nc0
Spinal trigeminal nucleus caudal partcontraSp5C2
Nucleus of the solitary tract lateral partcontraSolL0.5
Dorsal raphe nucleuscontraDR2
Superior central raphe nucleuscontraCS3
Midline apneic sitecontraMAS3
Raphe magnus nucleuscontraRMg0.5
Raphe obscurus nucleuscontraROb0.5
Cuneate nucleuscontraCu0
Paragigantocellular reticular nucleuscontraPGi0.5
Lateral paragigantocellular nucleuscontraLPGi0.5
Lateral paragigantocellular nucleus rostral partcontraLPGiR0.5
Nucleus of the horizontal limb of the diagonal bandcontraHDB0.5
Substantia innominatacontraSI0.5
Lateral preoptic areacontraLPO2
Medial preoptic areacontraMPA1
Magnocellular preoptic nucleuscontraMCPO2
Dorsomedial hypothalamic nucleuscontraDMHy0.5
Lateral hypothalamic areacontraLH2
Anterior hypothalamic areacontraAHA0.5
Dorsal hypothalamic areacontraDA0.5
Posterior hypothalamic nucleuscontraPH0.5
Tuberal area lateral partcontraTAL0.5
Tuberal area medial partcontraTAm0.5
Ventromedial hypothalamic nucleuscontraVMH0.5
Arcuate nucleuscontraArc0
Periventricular hypothalamic nucleuscontraPe0.5
Premammillary nucleus dorsal partcontraPMD0
Perifornical nucleuscontraPeF0.5
Zona incertacontraZI0.5
Tuber cinereum areacontraTC0
Lateral habenular nucleuscontraLHb2
Anterior pretectal nucleuscontraAPT0.5
Amygdaloid complexcontraAC-0.5
Bed nucleus of the stria terminaliscontraBST0
Central amygdaloid nucleuscontraCe0
Cingulate cortexcontraCg0.5
Prefrontal cortexcontraPFC1
Ventral geniculate nucleuscontraVG0
Dorsal horn C1contraDHC10.5
Ventral horn C1contraVHC10
Dorsal horn C2contraDHC20.5
Ventral horn C2contraVHC20
Dorsal horn C3contraDHC30.5
Ventral horn C3contraVHC30
Dorsal horn C4contraDHC40.5
Ventral horn C4contraVHC40
Dorsal horn C5contraDHC50.5
Ventral horn C5contraVHC50
Dorsal horn C6contraDHC60.5
Ventral horn C6contraVHC60
Dorsal horn C7contraDHC70.5
Ventral horn C7contraVHC70
Dorsal horn C8contraDHC80.5
Ventral horn C8contraVHC80
Dorsal horn T1contraDHT10.5
Ventral horn T1contraVHT10
Dorsal horn T2contraDHT20.5
Ventral horn T2contraVHT20
Dorsal horn T3contraDHT30.5
Ventral horn T3contraVHT30
Dorsal horn T4contraDHT40.5
Ventral horn T4contraVHT40
Dorsal horn T5contraDHT50.5
Ventral horn T5contraVHT50
Dorsal horn T6contraDHT60.5
Ventral horn T6contraVHT60
Dorsal horn T7contraDHT70.5
Ventral horn T7contraVHT70
Dorsal horn T8contraDHT80.5
Ventral horn T8contraVHT80
Dorsal horn T9contraDHT90.5
Ventral horn T9contraVHT90
Dorsal horn T10contraDHT100.5
Ventral horn T10contraVHT100
Dorsal horn T11contraDHT110.5
Ventral horn T11contraVHT110
Dorsal horn T12contraDHT120.5
Ventral horn T12contraVHT120
Dorsal horn T13contraDHT130.5
Ventral horn T13contraVHT130
Dorsal horn L1contraDHL10.5
Ventral horn L1contraVHL10
Dorsal horn L2contraDHL20.5
Ventral horn L2contraVHL20
Dorsal horn L3contraDHL30.5
Ventral horn L3contraVHL30
Dorsal horn L4contraDHL40.5
Ventral horn L4contraVHL40
Dorsal horn L5contraDHL50.5
Ventral horn L5contraVHL50
Dorsal horn L6contraDHL60.5
Ventral horn L6contraVHL60
Dorsal horn S1contraDHS10.5
Ventral horn S1contraVHSa10
Dorsal horn S2contraDHS20.5
Ventral horn S2contraVHSa20
Dorsal horn S3contraDHS30.5
Ventral horn S3contraVHSa30
Dorsal horn S4contraDHS40.5
Ventral horn S4contraVHSa40
Dorsal horn Co1contraDHCo10.5
Ventral horn Co1contraVHCo10
Dorsal horn Co2contraDHCo20.5
Ventral horn Co2contraVHCo20
Dorsal horn Co3contraDHCo30.5
Ventral horn Co3contraVHCo30
Fasciculus retroflexusipsifr-0.5
Ventral nucleus of the lateral lemniscusipsiVLL0
Paralemniscal nucleusipsiPL0
Parabigeminal nucleusipsiPBG0
Periparabigeminal areaipsiPPBGa0
Periaqueductal grayipsiPAG2
Dorsolateral periaqueductal grayipsiDLPAG1.5
Dorsolateral periaqueductal gray rostral partipsiPAGdlr2
Periaqueductal gray caudal partipsiPAGc0
Periaqueductal gray rostral partipsiPAGR2
Ventrolateral periaqueductal grayipsiVLPAG3
Periventricular gray matteripsiPVG2
Inferior colliculusipsiICOL-3
External cortex of the inferior colliculusipsiECIC0
Nucleus of the brachium of the inferior colliculusipsiBIC0
Superior colliculus deep layersipsiSCd0
Peduncularpontine nucleusipsiPPN0.5
Substantia nigra A9ipsiSN2
Substantia nigra compact partipsiSNC2
Substantia nigra lateral partipsiSNL0.5
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA2
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleus lateral partipsiDLTN0.5
Interposed cerebellar nucleiipsiICN0
Lateral cerebellar nucleusipsiCERL0
Medial cerebellar nucleusipsiMed0.5
A5 noradrenaline cellsipsiA50
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC2
Reticulotegmental nucleusipsiRETn0.5
Prepositus nucleusipsiPr1
Caudoventrolateral reticular nucleusipsiCVLR2
Rostroventrolateral reticular nucleusipsiRVL2.5
Mesencephalic reticular formationipsiMRF-0.5
Deep mesencephalic nucleusipsiDpMe-1
Nucleus reticularis subcuneiformisipsiRScf0.5
Pontine reticular nucleusipsiPRN-2
Pontine reticular nucleus oral partipsiPnO2
Pontine reticular nucleus caudal partipsiPNC0
Pontine reticular nucleus caudal part alphaipsiPnOca0.5
Cuneiforme nucleusipsiCnF2
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe2
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA1
Medullary reticular nucleus dorsal partipsiMdDd0.5
Ventral medullary reticular formationipsiVMurF0.5
Parvicellular reticular nucleusipsiPCRt1
Subcoeruleus nucleusipsiSubC2
Subcoeruleus nucleus alpha partipsiSubCA1
Subcoeruleus nucleus dorsal partipsiSubCD2
Subcoeruleus nucleus ventral partipsiSubCV0.5
Supragenual nucleusipsiSGe0.5
Ambiguus nucleusipsiAmb2
Spinal trigeminal nucleusipsiSp5nc0
Spinal trigeminal nucleus caudal partipsiSp5C1
Nucleus of the solitary tract lateral partipsiSolL1
Dorsal raphe nucleusipsiDR2
Superior central raphe nucleusipsiCS1
Midline apneic siteipsiMAS3
Raphe magnus nucleusipsiRMg3
Raphe obscurus nucleusipsiROb1.5
Rostral ventrolateral medullaipsiRVLM3
Cuneate nucleusipsiCu0
Paragigantocellular reticular nucleusipsiPGi0.5
Lateral paragigantocellular nucleusipsiLPGi2
Lateral paragigantocellular nucleus rostral partipsiLPGiR1
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Basal nucleus MeynertipsiB1
Substantia innominataipsiSI1
Substantia innominata rostral aspectipsiSIr1
Lateral preoptic areaipsiLPO3
Lateral preoptic area medial partipsiLPOm1
Medial preoptic areaipsiMPA2
Magnocellular preoptic nucleusipsiMCPO1
Medial preoptic nucleus lateral partipsiMPOL1
Dorsomedial hypothalamic nucleusipsiDMHy0.5
Dorsal regionipsiDHR1
Lateral hypothalamic area [Region of tuber cinereum]ipsiLHTUC2
Lateral hypothalamic areaipsiLH3
Anterior hypothalamic areaipsiAHA0.5
Anterior hypothalamic area central partipsiAHAC2
Dorsal hypothalamic areaipsiDA2
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleusipsiPH1
Tuberal area lateral partipsiTAL0.5
Tuberal area medial partipsiTAm1
Ventromedial hypothalamic nucleusipsiVMH1
Arcuate nucleusipsiArc0.5
Dorsal component of the dorsomedial paraventricular hypothalamic nucleusipsiDPaDM-0.5
Ventral component of the dorsomedial paraventricular hypothalamic nucleusipsiVPaDM-0.5
Paraventricular hypothalamic nucleusipsiPa1.5
Periventricular hypothalamic nucleusipsiPe0
Subparaventricular zone of the hypothalamusipsiSPa1.5
Premammillary nucleus dorsal partipsiPMD0.5
A8 dopamine cells retrorubral groupipsiRRF2
Perifornical nucleusipsiPeF1
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh1
Paraventricular thalamic nucleusipsiPV2
Reuniens thalamic nucleusipsiRe1
Parafascicular nucleusipsiPFa-0.5
Zona incertaipsiZI1
Tuber cinereum areaipsiTC0.5
Lateral habenular nucleusipsiLHb2
Anterior pretectal nucleusipsiAPT0
Medial forebrain bundleipsimfb-0.5
Amygdaloid complexipsiAC3
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior divisionipsiBSTA3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-0.5
Bed nucleus of the stria terminalis lateral division juxtacapsular partipsiBSTLJ3
Bed nucleus of the stria terminalis lateral division posterior partipsiBSTLP3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV3
Bed nucleus of the stria terminalis lateral division anterior partipsiBSTLA3
Central amygdaloid nucleusipsiCe0
Cingulate cortexipsiCg1
Prefrontal cortexipsiPFC2
Ventral geniculate nucleusipsiVG0
3d ventricleipsi3V-0.5
Dorsal horn C1ipsiDHC10
Ventral horn C1ipsiVHC10
Dorsal horn C2ipsiDHC20
Ventral horn C2ipsiVHC20
Dorsal horn C3ipsiDHC30
Ventral horn C3ipsiVHC30
Dorsal horn C4ipsiDHC40
Ventral horn C4ipsiVHC40
Dorsal horn C5ipsiDHC50
Ventral horn C5ipsiVHC50
Dorsal horn C6ipsiDHC60
Ventral horn C6ipsiVHC60
Dorsal horn C7ipsiDHC70
Ventral horn C7ipsiVHC70
Dorsal horn C8ipsiDHC80
Ventral horn C8ipsiVHC80
Dorsal horn T1ipsiDHT10
Ventral horn T1ipsiVHT10
Dorsal horn T2ipsiDHT20
Ventral horn T2ipsiVHT20
Dorsal horn T3ipsiDHT30
Ventral horn T3ipsiVHT30
Dorsal horn T4ipsiDHT40
Ventral horn T4ipsiVHT40
Dorsal horn T5ipsiDHT50
Ventral horn T5ipsiVHT50
Dorsal horn T6ipsiDHT60
Ventral horn T6ipsiVHT60
Dorsal horn T7ipsiDHT70
Ventral horn T7ipsiVHT70
Dorsal horn T8ipsiDHT80
Ventral horn T8ipsiVHT80
Dorsal horn T9ipsiDHT90
Ventral horn T9ipsiVHT90
Dorsal horn T10ipsiDHT100
Ventral horn T10ipsiVHT100
Dorsal horn T11ipsiDHT110
Ventral horn T11ipsiVHT110
Dorsal horn T12ipsiDHT120
Ventral horn T12ipsiVHT120
Dorsal horn T13ipsiDHT130
Ventral horn T13ipsiVHT130
Dorsal horn L1ipsiDHL10
Ventral horn L1ipsiVHL10
Dorsal horn L2ipsiDHL20
Ventral horn L2ipsiVHL20
Dorsal horn L3ipsiDHL30
Ventral horn L3ipsiVHL30
Dorsal horn L4ipsiDHL40
Ventral horn L4ipsiVHL40
Dorsal horn L5ipsiDHL50
Ventral horn L5ipsiVHL50
Dorsal horn L6ipsiDHL60
Ventral horn L6ipsiVHL60
Dorsal horn S1ipsiDHS10
Ventral horn S1ipsiVHSa10
Dorsal horn S2ipsiDHS20
Ventral horn S2ipsiVHSa20
Dorsal horn S3ipsiDHS30
Ventral horn S3ipsiVHSa30
Dorsal horn S4ipsiDHS40
Ventral horn S4ipsiVHSa40
Dorsal horn Co1ipsiDHCo10
Ventral horn Co1ipsiVHCo10
Dorsal horn Co2ipsiDHCo20
Ventral horn Co2ipsiVHCo20
Dorsal horn Co3ipsiDHCo30
Ventral horn Co3ipsiVHCo30
Stellate ganglionipsiAutoSteG-0.5
Adrenal glandipsiADRE-10
Gastrocnemius muscleipsiMuscGC-10
ClitorisipsiOrgCLi1
VaginaipsiOrgVag-10
CervixipsiOrgUTC-10

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal gray rostral partcontraPAGdlr0.5
Prelimbic cortex caudal partcontraPrLc0.5
Dorsolateral periaqueductal gray rostral partipsiPAGdlr2
Laterodorsal aspect of the middle level of the periaqueductal grayipsiPAGmiLD3
Prelimbic cortex caudal partipsiPrLc1.5
Prelimbic cortex layer 5ipsiPrLL51
Prelimbic cortex layer 6ipsiPrLL61
Infralimbic cortexipsiIL4
Infralimbic cortex layer 5ipsiILL51
Infralimbic cortex layer 6ipsiILL61
Dorsal peduncular cortexipsiDP1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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