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Rat connectome
Anterior commissure right
Abbreviation
ac
Color
Superior regions
Commissural systems
Synonyms
Abbr.
Language
Anterior commissure
ac
Eng
Subregions
Side
Anterior commissure anterior part
right
Anterior commissure intrabulbar part
right
Anterior commissure posterior part
right
Decussation of the anterior commissure
right
Around anterior commissure
right
Rostral edge of the anterior commissure
right
Output to
Name
Side
Abbr.
Weight
Details
Nucleus of the solitary tract
contra
Sol
-2
Dorsal motor nucleus of vagus
contra
10
-2
Dorsal motor nucleus of vagus medial part
contra
10M
-2
Rostral ventrolateral medulla
contra
RVLM
-2
Olfactory bulb A16
contra
MOB
0
Parabrachial nucleus anterior half
ipsi
PBah
-2
Nucleus of the solitary tract
ipsi
Sol
-2
Dorsal motor nucleus of vagus
ipsi
10
-2
Dorsal motor nucleus of vagus medial part
ipsi
10M
-2
Dorsal motor nucleus of vagus posterior part
ipsi
10Po
-2
Rostral ventrolateral medulla
ipsi
RVLM
-2
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
-2
Premammillary nucleus ventral part
ipsi
PMV
-2
Anterior basolateral nucleus medial part
ipsi
BLAM
-2
Bed nucleus of the stria terminalis lateral division dorsal part
ipsi
BSTLD
0.5
Bed nucleus of the stria terminalis lateral division ventral part
ipsi
BSTLV
-2
Nucleus of the lateral olfactory tract
ipsi
LOT
-2
Olfactory bulb A16
ipsi
MOB
4
3d ventricle
ipsi
3V
-2
Input from
Name
Side
Abbr.
Weight
Details
Nucleus of the solitary tract medial part
contra
SolM
-0.5
A1 noradrenergic cells
contra
A1
-0.5
A2 noradrenergic cells
contra
A2
-0.5
Along the border between the nucleus of the solitary tract and the nucleus nervi vagi
contra
Solb10
-0.5
Parasubthalamic nucleus
contra
PSTh
-2
Anterior piriform cortex
contra
APIRC
0
Anterior olfactory nucleus lateral part
contra
AONl
-2
Spinal cord layer 7 L1
contra
SCL7L1
-2
Spinal cord layer 9 L1
contra
SCL9L1
-2
Spinal cord layer 7 L2
contra
SCL7L2
-2
Spinal cord layer 9 L2
contra
SCL9L2
-2
Spinal cord layer 7 L3
contra
SCL7L3
-2
Spinal cord layer 9 L3
contra
SCL9L3
-2
Spinal cord layer 7 L4
contra
SCL7L4
-2
Spinal cord layer 9 L4
contra
SCL9L4
-2
Spinal cord layer 7 L5
contra
SCL7L5
-2
Spinal cord layer 9 L5
contra
SCL9L5
-2
Spinal cord layer 7 L6
contra
SCL7L6
-2
Spinal cord layer 9 L6
contra
SCL9L6
-2
Locus coeruleus
ipsi
LC
-2
Parabrachial nucleus
ipsi
PB
-2
Parabrachial nucleus anterior half
ipsi
PBah
-2
Area postrema
ipsi
AP
0
Nucleus of the solitary tract
ipsi
Sol
3
11 beta hydroxysteroiddehydrogenase type-2 cells
ipsi
SolHSD2
0
Nucleus of the solitary tract medial part
ipsi
SolM
1
Caudal medulla oblongata
ipsi
CMeOb
-0.5
A1 noradrenergic cells
ipsi
A1
-0.5
A2 noradrenergic cells
ipsi
A2
3
Along the border between the nucleus of the solitary tract and the nucleus nervi vagi
ipsi
Solb10
3
Substantia innominata
ipsi
SI
-2
Internal capsule
ipsi
ic
-2
Basolateral amygdaloid nucleus
ipsi
BL
0
Anterior tip of the lateral nucleus
ipsi
LAat
0
Bed nucleus of the stria terminalis intraamygdaloid division
ipsi
BSTIA
-2
Central amygdaloid nucleus lateral division
ipsi
CeL
0
Central amygdaloid nucleus medial division
ipsi
CeM
-2
Posterior amygdaloid nucleus
ipsi
COAp
-2
Medial amygdaloid nucleus
ipsi
Me
-2
Medial amygdaloid nucleus anteroventral part
ipsi
MeAV
-2
Globus pallidus
ipsi
GP
-2
Caudate putamen
ipsi
CPu
0
Lateral part of the middle caudate putamen
ipsi
CPuMiL
-0.5
Parasubthalamic nucleus
ipsi
PSTh
-2
Anterior piriform cortex
ipsi
APIRC
-2
Prepiriform cortex
ipsi
PRPIR
-2
Olfactory system
ipsi
OSY
3
Anterior olfactory nucleus
ipsi
AON
-2
Anterior olfactory nucleus lateral part
ipsi
AONl
-2
Spinal cord layer 7 L1
ipsi
SCL7L1
-2
Spinal cord layer 9 L1
ipsi
SCL9L1
-2
Spinal cord layer 7 L2
ipsi
SCL7L2
-2
Spinal cord layer 9 L2
ipsi
SCL9L2
-2
Spinal cord layer 7 L3
ipsi
SCL7L3
-2
Spinal cord layer 9 L3
ipsi
SCL9L3
-2
Spinal cord layer 7 L4
ipsi
SCL7L4
-2
Spinal cord layer 9 L4
ipsi
SCL9L4
-2
Spinal cord layer 7 L5
ipsi
SCL7L5
-2
Spinal cord layer 9 L5
ipsi
SCL9L5
-2
Spinal cord layer 7 L6
ipsi
SCL7L6
-2
Spinal cord layer 9 L6
ipsi
SCL9L6
-2
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
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Staff
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neuroVIISAS
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Rat connectome
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Other connectomes
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Neuroimaging
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Neurodegeneration
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Publications