University of Rostock
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Rat connectome
Hindlimb left
Abbreviation
MuscHi
Color
Superior regions
Muscle system
Synonyms
Abbr.
Language
Hindlimb
MuscHi
Eng
Hindlimb muscles
Eng
Subregions
Side
Femoral muscles
left
Hind leg muscles
left
Tibial muscle
left
Tibialis anterior muscle
left
Short plantar muscle
left
Peroneus muscle
left
Posterior tibialis muscle
left
Flexor hallicus longus
left
Flexor digitorum longus
left
Hindlimb muscles vasculature
left
Abductor digiti minimi muscle
left
Knee muscles
left
Inguinal muscles
left
Hindleg muscles
left
Gluteus maximus muscle
left
Gracilis muscle of hindlimb
left
Vastus lateralis muscle of the hindlimb
left
Vastus medialis of the hindlimb
left
Gastrocnemius soleus muscle
left
Extensor digitorum longus muscle hindlimb
left
Peroneus longus muscle
left
Extensor hallucis longus muscle
left
Gluteus medius muscle
left
Output to
Name
Side
Abbr.
Weight
Details
Brachium pontis stem of middle cerebellar peduncle
ipsi
bp
-2
Lateral pons
ipsi
LaP
3
Pons medial part
ipsi
Pme
3
Pons ventral part
ipsi
Pve
3
Reticulotegmental nucleus of the pons
ipsi
RtTg
2
Dorsal column nuclei
ipsi
DCN
-0.5
Medial lemniscus
ipsi
ml
-2
Dorsal peduncular cortex
ipsi
DP
2
Secondary visual cortex lateral area infragranular layers
ipsi
V2LigL
1
Spinal cord lamina 1 lumbar level 4 medial portion
ipsi
MESL1L4mp
-0.5
Pons
contra
P
-0.5
Input from
Name
Side
Abbr.
Weight
Details
Lateral periaqueductal gray caudal
ipsi
LPAGC
-10
Ventral periaqueductal gray caudal level
ipsi
VPAGc
-10
A5 noradrenaline cells
ipsi
A5
-10
A7 noradrenaline cells
ipsi
A7
-10
Locus coeruleus
ipsi
LC
-10
Subcoerulear area
ipsi
SCoe
-10
Gigantocellular reticular nucleus
ipsi
Gi
-10
C1 adrenaline cells rostral part
ipsi
C1ro
-10
Raphe magnus nucleus
ipsi
RMg
-10
Rostral ventrolateral medulla
ipsi
RVLM
-10
Paragigantocellular reticular nucleus
ipsi
PGi
-10
Rostral part of the ventromedial medulla oblongata
ipsi
RMeObvm
-10
Lateral hypothalamic area
ipsi
LH
-10
Arcuate nucleus
ipsi
Arc
-10
Paraventricular hypothalamic nucleus
ipsi
Pa
-10
Lateral funiculus
ipsi
lf
-10
Bed nucleus of the stria terminalis
ipsi
BST
-10
Frontal cortex area 1 caudal part
ipsi
Fr1c
3
Hindleg region of the frontal cortex
ipsi
FrHL
3
Trunk region of the lateral agranular frontal cortex
ipsi
AGlt
3
Intermediolateral cell column
ipsi
IML
-10
Intermediomedial cell column
ipsi
IMM
-10
Intermediolateral cell column T10
ipsi
IMLT10
-10
Intermediolateral cell column T11
ipsi
IMLT11
-10
Intermediolateral cell column T12
ipsi
IMLT12
-10
Intermediolateral cell column T13
ipsi
IMLT13
-10
Intermediolateral cell column L1
ipsi
IMLL1
-10
A5 noradrenaline cells
contra
A5
-10
Locus coeruleus
contra
LC
-10
Subcoerulear area
contra
SCoe
-10
Rostral ventrolateral medulla
contra
RVLM
-10
Lateral hypothalamic area
contra
LH
-10
Arcuate nucleus
contra
Arc
-10
Paraventricular hypothalamic nucleus
contra
Pa
-10
Frontal cortex area 1 caudal part
contra
Fr1c
1
Hindleg region of the frontal cortex
contra
FrHL
1
Trunk region of the lateral agranular frontal cortex
contra
AGlt
1
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
|
Staff
|
neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
|
Students
|
Links
|
Publications