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Rat connectome



Intermediolateral cell column T12 left


Abbreviation
IMLT12
Color       
Superior regionsThoracal segment 12

SynonymsAbbr.Language
Intermediolateral cell column T12IMLT12Eng

SubregionsSide
Intermediolateral cell column pars funicularis T12left
Intermediolateral cell column pars principalis T12left
Intermediolateral cell column pars spinalis T12left
Sympathetic preganglionic cell column T12left

Output to

NameSideAbbr.WeightDetails
Reticulotegmental nucleusipsiRETn-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB1
Koelliker Fuse nucleusipsiKF-0.5
Gigantocellular reticular nucleusipsiGi-0.5
Nucleus of the solitary tractipsiSol1
Lateral paragigantocellular nucleusipsiLPGi-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
RetinaipsiRET-10
Sympathoadrenal preganglionic neuronsipsiSymAPreGang1
Dorsal root ganglion T12ipsiDRGT12-2
Sympathetic preganglionic cell column T12ipsiSpIMLT12-0.5
Lumbar segment 1ipsiL1-1
Dorsal root ganglion L3ipsiDRGL3-0.5
Dorsal root ganglion L4ipsiDRGL4-0.5
Dorsal root ganglion L5ipsiDRGL5-0.5
Dorsal root ganglion L6ipsiDRGL6-0.5
Sympathetic preganglionic cell column T12contraSpIMLT12-0.5
Dorsal root ganglion L3contraDRGL3-0.5
Dorsal root ganglion L4contraDRGL4-0.5
Dorsal root ganglion L5contraDRGL5-0.5
Dorsal root ganglion L6contraDRGL6-0.5
Superior cervical ganglionipsiAutoSCeG-0.5
Thoracic sympathetic ganglion at level T 12ipsiAutoPaGTsym12-0.5
Coeliaco-mesenteric ganglion complexipsiAutoParGcmgc3
Celiac ganglionipsiAutoCel-0.5
Pelvic ganglionipsiAutoPeG-0.5
Tibial nerveipsitibial-0.5
Coeliaco-mesenteric ganglion complexcontraAutoParGcmgc3
Tibial nervecontratibial-0.5
CoripsiOrgsCor2
Anterior gastric wall of the corpusipsiOrgsStomaCagw0
Ventral stomach wallipsiOrgsStomVWS-0.5
Anterior gastric wall of the corpuscontraOrgsStomaCagw0
Ventral stomach wallcontraOrgsStomVWS-0.5
Distal colonipsiOrgsColonDi-0.5
Distal coloncontraOrgsColonDi-0.5
Liver lobeipsiOrgsLivL4
ForepawipsiOrgBSDFP-10
Hindpaw skinipsiOrgHPS-10
Tail skinipsiOrgBSTail-10
Adrenal glandipsiADRE3
Adrenal medullaipsiOrgsAM3
Adrenal medullary ganglion neuronsipsiOrgsAMgn-0.5
Vitreous humor of eyeipsiOrgVHEye3
HindlimbipsiMuscHi-10
Gastrocnemius muscleipsiMuscGC3
Lumbar epaxial musclesipsiMuscLep3
Musculus masseteripsiMuscMass-0.5
Bulbospongiosus muscleipsiMuscbsp-0.5
Femoral bone marrowipsiOrgSkFemM3
PeritoneumipsiOrgPeri-0.5
Mammary glandipsiOrgMamG-0.5
OvaryipsiOrgOvar-0.5
CervixipsiOrgUTC2
Uterus bodyipsiOrgUTB-10
EpididymisipsiOrgEpi-0.5
PenisipsiOrgPenis3
Corpus cavernosumipsiOrgCC3
Corpus spongiosumipsiOrgSPG1
Ventral prostate glandipsiOrgProstV2
TestisipsiOrgTest-0.5
KidneyipsiOrgsKid2
Urinary bladderipsiOrgUrBLa-0.5
Trigone of the urinary bladderipsiOrgUrBLaT-10
SpleenipsiOrgSPL3
Adrenal glandcontraADRE3
Lumbar epaxial musclescontraMuscLep2
Femoral bone marrowcontraOrgSkFemM-0.5
OvarycontraOrgOvar-0.5
EpididymiscontraOrgEpi-0.5
Corpus cavernosumcontraOrgCC-0.5
Ventral prostate glandcontraOrgProstV0.5
KidneycontraOrgsKid1
SpleencontraOrgSPL3
Pancreas sideipsiOrgsPancs-10
Pancreas sidecontraOrgsPancs-10

Input from

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk-0.5
Periaqueductal grayipsiPAG-0.5
Dorsomedial periaqueductal grayipsiDMPAG-0.5
Lateral periaqueductal grayipsiLPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Periventricular gray matteripsiPVG-0.5
Red nucleus magnocellular partipsiRMC-0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Edinger Westphal nucleusipsiEW-0.5
A5 noradrenaline cellsipsiA53
A5 noradrenaline cells caudal partipsiA5C2
A5 noradrenaline cells rostral partipsiA5R2
A7 noradrenaline cellsipsiA71
Barringtons nucleusipsiBar-0.5
Locus coeruleusipsiLC3
Reticulotegmental nucleusipsiRETn-0.5
Paramedian reticular nucleusipsiPMn0
Rostroventral reticular formationipsiRFrv3
Rostroventrolateral reticular nucleusipsiRVL3
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC1
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF0.5
Parabrachial nucleus dorsal partipsiPBD-0.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus ventral partipsiGiV0.5
Medial medullary reticular nucleusipsiMMdD1
Medial subnucleus reticularis ventralisipsiMSRV1
Parvicellular reticular nucleusipsiPCRt0.5
Subcoeruleus nucleusipsiSubC1
Medulla oblongataipsiMeOb-0.5
C1 adrenaline cellsipsiC1-0.5
Ambiguus nucleusipsiAmb-0.5
Accessory trigeminal nucleusipsiAcs5-0.5
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract caudal partipsiSolca0.5
Nucleus of the solitary tract intermediate partipsiSolIM0.5
Nucleus of the solitary tract ventral partipsiSolV0.5
Nucleus of the solitary tract ventrolateral partipsiSolVL0.5
Raphe nucleiipsiRAN-0.5
Caudal raphe nucleiipsiRANc3
Dorsal raphe nucleusipsiDR-0.5
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus caudal partipsiRMgc-0.5
Raphe obscurus nucleusipsiROb3
Raphe obscurus nucleus rostral partipsiRObr-0.5
Raphe obscurus nucleus ventral partipsiRObV2
Raphe pallidus nucleusipsiRPa3
Raphe pallidus nucleus rostral partipsiRParo-10
Ventral lateral medulla oblongataipsiMVL-0.5
Caudal ventrolateral medullaipsiCVLM-0.5
Rostral ventrolateral medullaipsiRVLM3
Nucleus interfascicularis hypoglossiipsiNIFH-0.5
Inferior olive cap of Kooy of the medial nucleusipsiIOK-0.5
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi3
Retrotrapezoid nucleusipsiRTN3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm2
Medulla oblongata rostroventralipsiMeObRV-0.5
Lateral zoneipsiLHA2
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area posterior partipsiLHAp0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC0.5
Anterior hypothalamic areaipsiAHA0
Dorsal hypothalamic areaipsiDA-0.5
Posterior hypothalamic nucleusipsiPH-0.5
Arcuate nucleusipsiArc-0.5
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP4
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD-0.5
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP0.5
Paraventricular hypothalamic nucleus dorsal partipsiPaD-0.5
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo-0.5
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]ipsiPaV-0.5
Ventrolateral paraventricular hypothalamic nucleusipsiPaVM-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag0
Paraventricular hypothalamic nucleus magnocellular division posterior partipsiPaMagP2
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo1
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD2.5
Paraventricular hypothalamic nucleus parvocellular division lateroposterior subnucleiipsiPavPoLP3
Paraventricular hypothalamic nucleus parvocellular division ventral partipsiPavPoV0.5
Paraventricular nucleus lateral parvocellular partipsiPaLp0.5
Paraventricular nucleus dorsal partipsiPaDo3
Paraventricular nucleus posterior partipsiPaPos3
Paraventricular nucleus ventral partipsiPaVe3
Supraoptic nucleus [Supraoptic region]ipsiSO0
A11 dopamine cellsipsiA111
Perifornical nucleusipsiPeF3
Retrochiasmatic areaipsiRCh-0.5
Basal retrochiasmatic areaipsiBRCh1
Parafascicular thalamic nucleus prerubral partipsiPFPR1
Zona incertaipsiZI-0.5
Tuber cinereum areaipsiTC-0.5
Neurons in the lateral funiculus cervical level C3ipsiNLFC3-0.5
Cingulate cortex area 3 vasoregulatory regionipsiCg3vr1
Cingulate cortex area 3 vasoregulatory region layer 3ipsiCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4ipsiCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5ipsiCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6ipsiCg3vrL61
Dorsal anterior cingulate cortex layer 5ipsiDACCL5-0.5
Prelimbic cortexipsiPrL-0.5
Prelimbic cortex layer 5ipsiPrLL5-0.5
Infralimbic cortexipsiIL1
Infralimbic cortex layer 5ipsiILL5-0.5
Insular cortexipsiICX0
Sensory regionsipsiSR0
Lateral spinal nucleusipsiMESLn-0.5
Spinal cord interneuronsipsiMESin-0.5
Dorsal root ganglion L3ipsiDRGL3-10
Dorsal root ganglion L4ipsiDRGL4-10
Dorsal root ganglion L5ipsiDRGL5-10
Dorsal root ganglion L6ipsiDRGL6-10
A5 noradrenaline cellscontraA53
Locus coeruleuscontraLC1
Rostroventral reticular formationcontraRFrv3
Rostroventrolateral reticular nucleuscontraRVL3
Pontine reticular nucleus caudal partcontraPNC0.5
Koelliker Fuse nucleuscontraKF0.5
Gigantocellular reticular nucleuscontraGi0.5
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Medial medullary reticular nucleuscontraMMdD1
Medial subnucleus reticularis ventraliscontraMSRV1
Parvicellular reticular nucleuscontraPCRt0.5
Medulla oblongatacontraMeOb-0.5
C1 adrenaline cellscontraC1-0.5
Accessory trigeminal nucleuscontraAcs5-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract caudal partcontraSolca0.5
Caudal raphe nucleicontraRANc1
Raphe magnus nucleuscontraRMg1
Raphe obscurus nucleuscontraROb1
Raphe pallidus nucleuscontraRPa1
Ventral lateral medulla oblongatacontraMVL-0.5
Rostral ventrolateral medullacontraRVLM3
Nucleus interfascicularis hypoglossicontraNIFH-0.5
Inferior olive cap of Kooy of the medial nucleuscontraIOK-0.5
Paragigantocellular reticular nucleuscontraPGi1
Retrotrapezoid nucleuscontraRTN1
Medulla oblongata rostroventralcontraMeObRV-0.5
Lateral zonecontraLHA2
Lateral hypothalamic areacontraLH0.5
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleus lateral parvocellular partcontraLPPa0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisioncontraPavPoD0.5
Paraventricular hypothalamic nucleus parvocellular division ventral partcontraPavPoV0.5
Paraventricular nucleus dorsal partcontraPaDo1
Paraventricular nucleus posterior partcontraPaPos1
Paraventricular nucleus ventral partcontraPaVe1
A11 dopamine cellscontraA110.5
Perifornical nucleuscontraPeF2
Retrochiasmatic areacontraRCh-0.5
Parafascicular thalamic nucleus prerubral partcontraPFPR0.5
Cingulate cortex area 3 vasoregulatory regioncontraCg3vr1
Cingulate cortex area 3 vasoregulatory region layer 3contraCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4contraCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5contraCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6contraCg3vrL61
Infralimbic cortexcontraIL1
Insular cortexcontraICX0
Sensory regionscontraSR0
Dorsal root ganglion L3contraDRGL3-10
Dorsal root ganglion L4contraDRGL4-10
Dorsal root ganglion L5contraDRGL5-10
Dorsal root ganglion L6contraDRGL6-10
PeritoneumipsiOrgPeri-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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