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Rat connectome



Dorsal peduncular cortex left


Abbreviation
DP
Color       
Superior regionsPeduncular cortex

SynonymsAbbr.Language
 PDC 
 DPC 
Dorsal peduncular cortexDPEng

SubregionsSide
Dorsal peduncular cortex layersleft
Rostral part of dorsal peduncular cortexleft
Caudal part of the dorsal peduncular cortexleft
Rostrocaudal middle level of the dorsal peduncular cortexleft
Mid-dorsal peduncular cortexleft

Output to

NameSideAbbr.WeightDetails
Paralemniscal nucleusipsiPL2
Periaqueductal grayipsiPAG2
Dorsolateral periaqueductal grayipsiDLPAG1
Lateral periaqueductal grayipsiLPAG2
Periaqueductal gray lateroventral partipsiPAGLV2
Periaqueductal gray rostral partipsiPAGR3
Periaqueductal gray rostral poleipsiPAGr3
Periventricular part of the periaqueductal grayipsiPAGpv1
Ventrolateral periaqueductal grayipsiVLPAG3
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Medial pontine nucleusipsiMPoN3
Rostromedial tegmental nucleusipsiRMTg1
Substantia nigra compact partipsiSNC0
Substantia nigra reticular partipsiSNR0
Ventral tegmental area A10ipsiVTA3
Ventral tegmental area A10 caudal partipsiVTAcp2
Ventral tegmental area A10 middle thirdipsiVTAmit-0.5
Ventral tegmental area rostral partipsiVTAR2
Middle part of the retrorubral fieldipsiRRmi2
Laterodorsal tegmental nucleusipsiLDTg0.5
Locus coeruleusipsiLC2
Pontine nucleiipsiPn3
Pontine nuclei rostromedial partipsiBPNrm-0.5
Pontine nucleus ventral partipsiBPNv1
Parabrachial nucleusipsiPB2
MyelencephalonipsiMYC-0.5
Around mesencephalic trigeminal nucleusipsiMe5A0.5
Dorsal part of the mesencephalic trigeminal nucleusipsiMe5D3
Mesencephalic trigeminal nucleus lateral partipsiMe5L2
Mesencephalic trigeminal nucleus rostral partipsiMe5R3
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp4
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC1.5
Dorsal raphe nucleus central partipsiDRcep1.5
Dorsal raphe nucleus lateral wingipsiDRlw1.5
Dorsal raphe nucleus rostral partipsiDRr3
Median raphe nucleusipsiMnR3
Central raphe nucleus dorsal partipsiCRNdp2
Basal forebrainipsiBAF-0.5
Rostral part of the dorsal endopiriform nucleusipsiDEnR3
Ventral endopiriform nucleusipsiVEn3
Diagonal band of BrocaipsiDBB1
Substantia innominataipsiSI2
Substantia innominata ventral partipsiSIV3
Medial preoptic areaipsiMPA1
Tenia tectaipsiTT-0.5
Ventral tenia tectaipsiVTT-0.5
Tuberomammillary nucleusipsiTuM3
Lateral hypothalamic areaipsiLH2.5
Lateral hypothalamic area medial partipsiLHAm3
Lateral hypothalamic area perifornical partipsiPFx4
Medial division of the hypothalamusipsiMdH2
Anterior hypothalamic areaipsiAHA1
Mediobasal hypothalamus anterior partipsiMeHypoAnt1
Mediobasal hypothalamus posterior partipsiMeHypoP1
Suprachiasmatic nucleusipsiSCh2
Tuberal hypothalamic partipsiTHYPO1
Medial mammillary nucleus dorsal partipsiMMnd2.5
Supramammillar nucleusipsiSuM3
Supramammillar nucleus ventral partipsiSuMV1.5
A8 dopamine cells retrorubral group lateral partipsiRRFL2
A8 dopamine cells retrorubral group medial partipsiRRFm3
Medialmost part of the anteromedial thalamic nucleusipsiAMmm1
Gelatinosus thalamic nucleusipsiG2
Mediodorsal thalamic nucleusipsiMD2.5
Mediodorsal thalamic nucleus medial partipsiMDM1
Submedius thalamic nucleusipsiSub2
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV1
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus posterior partipsiPVP2
Reuniens thalamic nucleusipsiRe1
Subparafascicular thalamic nucleus caudal partipsiSPFc2
Subparafascicular thalamic nucleus medial partipsiSPFme1
Subparafascicular thalamic nucleus rostral partipsiSPFr2
Forel field H2ipsiFFH21.5
Lateral habenular nucleusipsiLHb1
Basal nucleusipsiBnc1
Accessory basal nucleusipsiAB1.5
Accessory basal nucleus rostral partipsiABr1.5
Basal nucleus magnocellular partipsiBmc0
Basal nucleus parvicellular partipsiBpc1
Basolateral amygdaloid nucleusipsiBL1
Basolateral nucleus medial portionipsiBLmp0.5
Ventral basolateral nucleusipsiBLV1
Basomedial amygdaloid nucleusipsiBM0.5
Posterior basomedial nucleusipsiBMP1
Posterior basomedial nucleus caudal partipsiBMPc-0.5
Lateral amygdaloid nucleusipsiLA1.5
Ventromedial part of the lateral nucleusipsiLaVM1.5
Bed nucleus of the stria terminalisipsiBST1
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL1.5
Bed nucleus of the stria terminalis lateral division posterior partipsiBSTLP1
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV1
Bed nucleus of the stria terminalis medial divisionipsiBSTM1.5
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus intermediate divisionipsiCeI3
Central amygdaloid nucleus lateral divisionipsiCeL1
Central amygdaloid nucleus lateral division capsular partipsiCeC2
Central amygdaloid nucleus capsular subdivision lateral part dorsal portionipsiCeCLd-1
Central amygdaloid nucleus medial divisionipsiCeM2
Central amygdaloid nucleus medial division rostral partipsiCeMR2
Central amygdaloid nucleus rostroventral partipsiCeRV-0.5
Central amygdaloid nucleus ventral partipsiCeV3
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC1
Amygdalopiriform transition areaipsiAPir1
Anterior amygdaloid areaipsiAA2
Anterior amygdaloid area dorsal partipsiAAD-0.5
Anterior amygdaloid area ventral partipsiAAV-0.5
Cortical amygdaloid nucleusipsiCAn2.5
Posterior amygdaloid nucleusipsiCOAp1
Posterolateral cortical nucleusipsiPLCo-0.5
Nucleus of the lateral olfactory tractipsiLOT2.5
Nucleus of the lateral olfactory tract layer 1ipsiLOTL1-0.5
Nucleus of the lateral olfactory tract layer 2ipsiLOTL2-0.5
Nucleus of the lateral olfactory tract layer 3ipsiLOTL3-0.5
Periamygdaloid complexipsiPAC2.5
Medial amygdaloid nucleusipsiMe2.5
Medial amygdaloid nucleus anterodorsal partipsiMeAD3
Medial amygdaloid nucleus caudal partipsiMeC1
Medial amygdaloid nucleus dorsal tipipsiMeDT1
Medial amygdaloid nucleus posteroventral partipsiMePV3
Amygdalostriatal transition areaipsiAStr2
Ventral pallidumipsiVP2
Accumbens nucleusipsiAc1
Accumbens nucleus coreipsiAcbC0.5
Accumbens nucleus rostral partipsiAcR-0.5
Lateral accumbens shellipsiAcbShl3
Medial accumbens shellipsiAcbShm3
Midrostrocaudal level of the accumbens nucleus shellipsiAcbShmrc1
Anterior accumbensipsiAcbA-2
Ventral striatumipsiCPuv-1
Ventromedial striatum rostral partipsiCPuvmr0
Medial part of the caudate putamenipsiCPuMed1
Medial part of caudal subthalamic nucleusipsiSThmc1.5
Field CA1 of hippocampus stratum lacunosum-moleculare superficial partipsiCA1sLM1
PresubiculumipsiPrS1
Lateral entorhinal cortexipsiLEnt2
Lateral entorhinal cortex layer 2ipsiLEntL23
Lateral entorhinal cortex ventral partipsiVLEA3
Lateral entorhinal cortex ventromedial partipsiVMEAL3
Anterior piriform cortexipsiAPIRC2
Posterior piriform cortexipsiPPIRC-0.5
Posterior piriform cortex lateral two-thirdipsiPPIRCLtt-0.5
Cingulate cortexipsiCg-2
Anterior cingulate cortexipsiACC2
Cingulate cortex area 1 caudal partipsiCg1c1
Cingulate cortex area 2 caudal partipsiCg2c1
Rostral part of the ventral anterior cingulate cortex layer 1ipsiVACCRL11
Rostral part of the ventral anterior cingulate cortex layer 5ipsiVACCRL51
Prelimbic cortexipsiPrL1
Prelimbic cortex ventral part layer 1ipsiPrLvL11
Prelimbic cortex ventral part layer 5ipsiPrLvL50.5
Infralimbic cortexipsiIL3
Infralimbic cortex dorsal part layer 1ipsiILDoL11
Infralimbic cortex dorsal part layer 2ipsiILDoL20.5
Infralimbic cortex dorsal part layer 3ipsiILDoL30.5
Infralimbic cortex dorsal part layer 4ipsiILDoL40.5
Infralimbic cortex dorsal part layer 5ipsiILDoL51
Infralimbic cortex dorsal part layer 6ipsiILDoL61
Infralimbic cortex ventral part layer 1ipsiILvL13
Infralimbic cortex ventral part layer 2ipsiILvL22
Infralimbic cortex ventral part layer 3ipsiILvL32
Infralimbic cortex ventral part layer 4ipsiILvL42
Infralimbic cortex ventral part layer 5ipsiILvL53
Infralimbic cortex ventral part layer 6ipsiILvL63
Frontal cortex area 2ipsiFr2-0.5
Dorsal peduncular cortexipsiDP3
Dorsal peduncular cortex layer 5ipsiDPL53
Dorsal peduncular cortex layer 6ipsiDPL63
Dorsal peduncular cortex layer 1ipsiDPL13
Dorsal peduncular cortex layer 2ipsiDPL22
Dorsal peduncular cortex layer 3ipsiDPL32
Dorsal peduncular cortex layer 4ipsiDPL42
Motoric regionsipsiM3
Medial prefrontal cortexipsimPFC1
Medial agranular prefrontal cortexipsiAGm0
Accessory olfactory bulbipsiAOB1
Olfacto septal areaipsiOSA3
Olfactory bulb A16ipsiMOB3
External plexiform layer of the olfactory bulbipsiOBepl3
Glomerular layer of the olfactory bulbipsiOBglo3
Superficial portion of the granular cell layer of the olfactory bulbipsiOBsgra3
Deep granular cell layer of the olfactory bulbipsiOBgrad-0.5
Internal plexiform layer of the olfactory bulbipsiOBipl3
Olfactory cortex layer 1bipsiONL1b3
Anterior olfactory nucleusipsiAON1
Olfactory tubercle medial partipsiTuOMP-0.5
Septal regionipsiSER1.5
Periaqueductal graycontraPAG2
Lateral periaqueductal graycontraLPAG0.5
Periaqueductal gray lateroventral partcontraPAGLV2
Periaqueductal gray rostral partcontraPAGR1.5
Periaqueductal gray rostral polecontraPAGr0.5
Ventrolateral periaqueductal graycontraVLPAG1.5
Ventral tegmental area A10contraVTA1
Ventral tegmental area A10 middle thirdcontraVTAmit-0.5
Middle part of the retrorubral fieldcontraRRmi1
Locus coeruleuscontraLC0.5
Parabrachial nucleuscontraPB0.5
Around mesencephalic trigeminal nucleuscontraMe5A0.5
Dorsal part of the mesencephalic trigeminal nucleuscontraMe5D1.5
Mesencephalic trigeminal nucleus lateral partcontraMe5L1
Mesencephalic trigeminal nucleus rostral partcontraMe5R0.5
Mesencephalic trigeminal nucleus caudal polecontraMe5cp1.5
Dorsal raphe nucleuscontraDR2
Median raphe nucleuscontraMnR3
Lateral hypothalamic areacontraLH2.5
A8 dopamine cells retrorubral group lateral partcontraRRFL1
A8 dopamine cells retrorubral group medial partcontraRRFm1.5
Mediodorsal thalamic nucleuscontraMD2.5
Submedius thalamic nucleuscontraSub1
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus medial partcontraSPFme0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Basolateral amygdaloid nucleuscontraBL-1
Accumbens nucleuscontraAc-1
Ventral striatumcontraCPuv-1
Rostral part of the ventral anterior cingulate cortex layer 1contraVACCRL10
Rostral part of the ventral anterior cingulate cortex layer 5contraVACCRL50
Prelimbic cortex ventral part layer 1contraPrLvL10
Prelimbic cortex ventral part layer 5contraPrLvL50
Infralimbic cortexcontraIL-0.5
Infralimbic cortex dorsal part layer 1contraILDoL10
Infralimbic cortex dorsal part layer 2contraILDoL20
Infralimbic cortex dorsal part layer 3contraILDoL30
Infralimbic cortex dorsal part layer 4contraILDoL40
Infralimbic cortex dorsal part layer 5contraILDoL50
Infralimbic cortex dorsal part layer 6contraILDoL60
Infralimbic cortex ventral part layer 1contraILvL10
Infralimbic cortex ventral part layer 2contraILvL20
Infralimbic cortex ventral part layer 3contraILvL30
Infralimbic cortex ventral part layer 4contraILvL40
Infralimbic cortex ventral part layer 5contraILvL50
Infralimbic cortex ventral part layer 6contraILvL60
Dorsal peduncular cortexcontraDP-0.5
Dorsal peduncular cortex layer 5contraDPL50
Dorsal peduncular cortex layer 6contraDPL60
Dorsal peduncular cortex layer 1contraDPL10
Dorsal peduncular cortex layer 2contraDPL20
Dorsal peduncular cortex layer 3contraDPL30
Dorsal peduncular cortex layer 4contraDPL40
Septal regioncontraSER1
KidneycontraOrgsKid0.5

Input from

NameSideAbbr.WeightDetails
Paralemniscal nucleusipsiPL-1
Medial pontine nucleusipsiMPoN1.5
Ventral tegmental area A10ipsiVTA4
Pontine nucleiipsiPn1.5
Ventral tenia tecta superior partipsiSVTT3
Lateral hypothalamic areaipsiLH-0.5
Most anterior part of the parvalbumin-positive nucleus of the lateral hypothalamusipsiPV1ma-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO-0.5
Submedius thalamic nucleus ventral partipsiSubV2
Subparafascicular thalamic nucleusipsiSPF2
Subparafascicular thalamic nucleus rostral partipsiSPFr2
Tuber cinereum areaipsiTC-0.5
Ventral bank of the rhinal fissureipsiVBrf-1
Basolateral amygdaloid nucleusipsiBL-0.5
Posterior basolateral nucleusipsiBLP-0.5
Nucleus of the lateral olfactory tract layer 2ipsiLOTL21
Nucleus of the lateral olfactory tract layer 3ipsiLOTL31
Periamygdaloid complexipsiPAC3
Field CA1 of hippocampusipsiCA1-0.5
Field CA1 of hippocampus ventral partipsiCA1v-0.5
Subiculum ventral partipsiSv-0.5
Ventral hippocampusipsiHIPPv-0.5
Dorsal intermediate entorhinal cortexipsiDIEnt1
Lateral entorhinal cortexipsiLEnt3
Caudal entorhinal field 1ipsiCEnt12
Ventral intermediate entorhinal cortexipsiVIEnt1
Posterior piriform cortexipsiPPIRC3
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL3
Ventral part of the agranular posterior insular cortexipsiAIPV2
Caudalmost area of the dysgranular insular cortexipsiDIvCM1
Rostrocaudal middle level of the dysgranular insular cortexipsiDIrcm1
Caudalmost area of the granular insular cortexipsiGICm1
Rostrocaudal middle level of the granular insular cortexipsiGIrcm1
Dorsal peduncular cortexipsiDP3
Somatomotoric regionsipsiSMR2
Medial orbital cortex deep layersipsiMOcxdL-1
Ventral tegmental area A10contraVTA4
Submedius thalamic nucleus ventral partcontraSubV1
Lateral entorhinal cortex dorsolateral partcontraLEntDLa-0.5
Infralimbic cortexcontraIL-0.5
Dorsal peduncular cortexcontraDP-0.5
ForelimbipsiMuscFo2
HindlimbipsiMuscHi2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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