University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Caudal medulla oblongata left


Abbreviation
CMeOb
Color       
Superior regionsMedulla oblongata

SynonymsAbbr.Language
Caudal medullary levels Eng
Caudal medulla oblongataCMeOb 
Caudal medulla  
Lower brainstem Eng

SubregionsSide
Caudal interstitial nucleus of the medial longitudinal fasciculusleft
Caudal medulla oblongata dorsal partleft
Caudal medulla oblongata ventrolateral partleft
Caudal midline medulla oblongataleft
Caudal reticular medulla oblongataleft
Caudoventral respiratory groupleft
Caudoventral reticular nucleusleft
Ventral respiratory groupleft
Laterodorsal caudal medulla oblongataleft
Around the caudal part of the ventral respiratory groupleft
Autonomic nuclei of the caudal medulla oblongataleft
Caudal medulla oblongata ventral regionleft
Lateral respiratory columnleft

Output to

NameSideAbbr.WeightDetails
Medial preoptic areaipsiMPA3
Paraventricular hypothalamic nucleusipsiPa-0.5
Area between stria teminalis and internal capsuleipsistic-0.5
Medial forebrain bundleipsimfb-2
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD-0.5
Bed nucleus of the stria terminalis caudal partipsiBSTCa0
Bed nucleus of the stria terminalis lateral divisionipsiBSTL0
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd-0.5
Bed nucleus of the stria terminalis rostral partipsiBSTro-0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv-0.5
Anterior commissureipsiac-0.5
Ventrolateral septal regionipsiVLSER-0.5
Cervical segmentsipsiCSeg3
Intermediolateral cell column T3ipsiIMLT32
Lateral portion of the internal capsulecontraLic1
Intermediolateral cell column T3contraIMLT31
Vagus nerveipsiAutoV3

Input from

NameSideAbbr.WeightDetails
Supraoculomotor central grayipsiSOCG-2
Dorsolateral periaqueductal gray rostral partipsiPAGdlr-2
Ventromedial periaqueductal grayipsiVMPAG-0.5
Substantia nigra lateral partipsiSNL0.5
Substantia nigra reticular partipsiSNR0.5
Barringtons nucleusipsiBar-0.5
Preoptic regionipsiPREO-0.5
Medial preoptic areaipsiMPA0.5
Juxtaparaventricular part [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPV-0.5
Dorsolateral hypothalamusipsiDLH2
Lateral hypothalamic area posterior partipsiLHAp-0.5
Dorsolateral hypothalamus around the fornixipsiDLHf2
Anterior hypothalamic areaipsiAHA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-0.5
Posterior hypothalamic areaipsiPHA-0.5
Arcuate nucleusipsiArc-0.5
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa0
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo3
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus dorsomedial capipsiPadmc3
Dorsal edge of paraventricular nucleus medial partipsiPameD-0.5
Paraventricular nucleus medial part dorsomedial parvocellular areaipsiPamedmp-0.5
Rostral to the paraventricular hypothalamic nucleus medial partipsiPamejr1
Suprachiasmatic nucleus dorsomedial partipsiSCnDM-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO0
A8 dopamine cells retrorubral groupipsiRRF0.5
Medial paraventricular thalamic nucleus properipsiPVMp0
Paraventricular thalamic nucleus ventromedial to the medial lateral transition zoneipsiPVmLvm3
Medial part of crus cerebriipsicpme2
Central amygdaloid nucleus lateral divisionipsiCeL1
Central amygdaloid nucleus medial divisionipsiCeM1
Frontal association cortexipsiFrA-0.5
Insular cortex layer 2ipsiICXL20
Insular cortex layer 3ipsiICXL30
Insular cortex layer 5ipsiICXL53
Central part of jaw motor areaipsiCJMCx2
Sensory regionsipsiSR-2
Cervical segment 6ipsiCS60.5
Cervical segment 7ipsiCS70.5
Cervical segment 8ipsiCS80.5
Lumbar segment 6ipsiL60.5
Sacral segment 1ipsiSa10.5
Sacral segment 2ipsiSa20.5
Dorsolateral periaqueductal gray rostral partcontraPAGdlr-2
Superior colliculuscontraSC2
Superior colliculus intermediate white layercontraSAI2
Superior colliculus deep layerscontraSCd2
Preoptic regioncontraPREO-0.5
Juxtaparaventricular part [Lateral hypothalamic area [Preoptic anterior region]]contraJPV-0.5
Lateral hypothalamic area posterior partcontraLHAp-0.5
Anterior hypothalamic areacontraAHA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Posterior hypothalamic areacontraPHA-0.5
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Suprachiasmatic nucleus dorsomedial partcontraSCnDM-0.5
Supraoptic nucleus [Supraoptic region]contraSO0
Primary somatosensory cortexcontraS13
Cervical segment 6contraCS60.5
Cervical segment 7contraCS70.5
Cervical segment 8contraCS80.5
Lumbar segment 6contraL60.5
Sacral segment 1contraSa10.5
Sacral segment 2contraSa20.5
PericardiumipsiOrgsPeric1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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