University of Rostock

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Rat connectome



Dorsolateral periaqueductal gray rostral part left


Abbreviation
PAGdlr
Color       
Superior regionsDorsolateral periaqueductal gray

SynonymsAbbr.Language
Dorsolateral periaqueductal gray rostral partPAGdlrEng

Output to

NameSideAbbr.WeightDetails
Ventral nucleus of the lateral lemniscusipsiVLL0
Paralemniscal nucleusipsiPL0.5
Parabigeminal nucleusipsiPBG0
Periparabigeminal areaipsiPPBGa0
Periaqueductal grayipsiPAG1
Dorsolateral periaqueductal grayipsiDLPAG-2
Dorsolateral periaqueductal gray caudal partipsiPAGdlc3
Periaqueductal gray caudal partipsiPAGc2
Periaqueductal gray rostral partipsiPAGR0
Ventrolateral periaqueductal gray caudal partipsiPAGvlc2
External cortex of the inferior colliculusipsiECIC0
Dorsal cortex of the inferior colliculus layer 3ipsiDCICL31.5
Nucleus of the brachium of the inferior colliculusipsiBIC0.5
Superior colliculusipsiSC3
Intermediate gray layer of the superior colliculusipsiInG1
Superior colliculus deep layersipsiSCd1
Superior colliculus medial partipsimSC1
Peduncularpontine nucleusipsiPPN0
Substantia nigra compact partipsiSNC1
Substantia nigra lateral partipsiSNL0
Substantia nigra reticular partipsiSNR0.5
Ventral tegmental area A10ipsiVTA2
Dorsal tegmental nucleusipsiDTg1
Dorsal tegmental nucleus lateral partipsiDLTN0
PyramisipsiPYR-2
Interposed cerebellar nucleiipsiICN0
Lateral cerebellar nucleusipsiCERL0
Medial cerebellar nucleusipsiMed0
A5 noradrenaline cellsipsiA52.5
A5 noradrenaline cells dorsal partipsiA5d2
A5 region dorsal to lateral superior olive medial to the facial nerveipsiA5dLSO2
Barringtons nucleusipsiBar3
Locus coeruleusipsiLC3
Reticulotegmental nucleusipsiRETn0
Prepositus nucleusipsiPr0
Caudoventrolateral reticular nucleusipsiCVLR2
Paramedian reticular nucleusipsiPMn1
Rostroventrolateral reticular nucleusipsiRVL-0.5
Mesencephalic reticular formationipsiMRF-2
Nucleus reticularis subcuneiformisipsiRScf0.5
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus caudal partipsiPNC0.5
Pontine reticular nucleus caudal part alphaipsiPnOca0.5
Cuneiforme nucleusipsiCnF3
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB0.5
Parabrachial nucleus medialipsiPBnMe0
Gigantocellular reticular nucleusipsiGi0
Gigantocellular reticular nucleus alpha partipsiGiA3
Medullary reticular nucleus dorsal partipsiMdDd1
Ventral medullary reticular formationipsiVMurF0
Subcoeruleus nucleus alpha partipsiSubCA3
Subcoeruleus nucleus dorsal partipsiSubCD3
Subcoeruleus nucleus ventral partipsiSubCV3
Supragenual nucleusipsiSGe0
Ambiguus nucleusipsiAmb1.5
Mesencephalic trigeminal tractipsime5-2
Spinal trigeminal nucleusipsiSp5nc0
Nucleus of the solitary tract commissural partipsiSolC1
Nucleus of the solitary tract lateral partipsiSolL1
Dorsal raphe nucleusipsiDR0
Superior central raphe nucleusipsiCS0.5
Midline apneic siteipsiMAS0
Raphe magnus nucleusipsiRMg1
Raphe magnus nucleus rostral partipsiRMgR1
Raphe obscurus nucleusipsiROb1
Caudal medulla oblongataipsiCMeOb-2
Cuneate nucleusipsiCu0
Paragigantocellular reticular nucleusipsiPGi0
Lateral paragigantocellular nucleusipsiLPGi-0.5
Lateral paragigantocellular nucleus retrofacial partipsiLPGirf1
Lateral paragigantocellular nucleus rostral partipsiLPGiR3
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Medial septal nucleusipsiMS1
Basal nucleus MeynertipsiB-3
Substantia innominataipsiSI-3
Preoptic regionipsiPREO2
Lateral preoptic areaipsiLPO0
Lateral preoptic area medial partipsiLPOm2
Medial preoptic areaipsiMPA0
Magnocellular preoptic nucleusipsiMCPO0
Medial preoptic nucleus lateral partipsiMPOL2
Dorsomedial hypothalamic nucleusipsiDMHy0
Lateral hypothalamic area [Region of tuber cinereum]ipsiLHTUC1
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area ventral partipsiLHAvp-0.5
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic area central partipsiAHAC3
Dorsal hypothalamic areaipsiDA3
Posterior hypothalamic nucleusipsiPH0.5
Tuberal area lateral partipsiTAL0
Tuberal area medial partipsiTAm0.5
Ventromedial hypothalamic nucleusipsiVMH2
Periventricular zoneipsiPVZ3
Arcuate nucleusipsiArc0
Periventricular hypothalamic nucleusipsiPe0
Premammillary nucleus dorsal partipsiPMD0.5
A8 dopamine cells retrorubral groupipsiRRF2
Perifornical nucleusipsiPeF0
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh1
Intermediodorsal thalamic nucleusipsiIMD1
Paraventricular thalamic nucleusipsiPV2
Reuniens thalamic nucleusipsiRe1
Zona incertaipsiZI3
Tuber cinereum areaipsiTC0.5
Lateral habenular nucleusipsiLHb0
Anterior pretectal nucleusipsiAPT0
Bed nucleus of the stria terminalisipsiBST-0.5
Central amygdaloid nucleusipsiCe0
Cingulate cortexipsiCg0
Prefrontal cortexipsiPFC0
Ventral geniculate nucleusipsiVG0.5
Ventral nucleus of the lateral lemniscuscontraVLL0
Paralemniscal nucleuscontraPL0.5
Parabigeminal nucleuscontraPBG0
Periparabigeminal areacontraPPBGa0
Periaqueductal graycontraPAG2
Dorsolateral periaqueductal graycontraDLPAG-2
Dorsolateral periaqueductal gray caudal partcontraPAGdlc1
Periaqueductal gray caudal partcontraPAGc1
Periaqueductal gray rostral partcontraPAGR0.5
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
External cortex of the inferior colliculuscontraECIC0
Dorsal cortex of the inferior colliculus layer 3contraDCICL30.5
Nucleus of the brachium of the inferior colliculuscontraBIC0
Intermediate gray layer of the superior colliculuscontraInG0
Superior colliculus deep layerscontraSCd1
Superior colliculus medial partcontramSC1
Peduncularpontine nucleuscontraPPN0
Substantia nigra compact partcontraSNC0
Substantia nigra lateral partcontraSNL0.5
Substantia nigra reticular partcontraSNR0.5
Ventral tegmental area A10contraVTA0
Dorsal tegmental nucleuscontraDTg0.5
Dorsal tegmental nucleus lateral partcontraDLTN0
PyramiscontraPYR-2
Interposed cerebellar nucleicontraICN0.5
Lateral cerebellar nucleuscontraCERL0.5
Medial cerebellar nucleuscontraMed0
A5 noradrenaline cellscontraA51
A5 noradrenaline cells dorsal partcontraA5d0.5
A5 region dorsal to lateral superior olive medial to the facial nervecontraA5dLSO0.5
Barringtons nucleuscontraBar1
Locus coeruleuscontraLC1
Reticulotegmental nucleuscontraRETn0.5
Prepositus nucleuscontraPr0
Caudoventrolateral reticular nucleuscontraCVLR0.5
Paramedian reticular nucleuscontraPMn0.5
Rostroventrolateral reticular nucleuscontraRVL-0.5
Mesencephalic reticular formationcontraMRF-2
Nucleus reticularis subcuneiformiscontraRScf1
Pontine reticular nucleus oral partcontraPnO1
Pontine reticular nucleus caudal partcontraPNC0.5
Pontine reticular nucleus caudal part alphacontraPnOca0.5
Cuneiforme nucleuscontraCnF2
Koelliker Fuse nucleuscontraKF0.5
Lateral parabrachial nucleuscontraLPB0
Parabrachial nucleus medialcontraPBnMe0
Gigantocellular reticular nucleuscontraGi0
Gigantocellular reticular nucleus alpha partcontraGiA1
Medullary reticular nucleus dorsal partcontraMdDd0.5
Ventral medullary reticular formationcontraVMurF0
Subcoeruleus nucleus alpha partcontraSubCA1
Subcoeruleus nucleus dorsal partcontraSubCD1
Subcoeruleus nucleus ventral partcontraSubCV1
Supragenual nucleuscontraSGe0
Ambiguus nucleuscontraAmb0.5
Mesencephalic trigeminal tractcontrame5-2
Spinal trigeminal nucleuscontraSp5nc0
Nucleus of the solitary tract commissural partcontraSolC0.5
Nucleus of the solitary tract lateral partcontraSolL0.5
Dorsal raphe nucleuscontraDR0
Superior central raphe nucleuscontraCS0
Midline apneic sitecontraMAS0
Raphe magnus nucleuscontraRMg0.5
Raphe magnus nucleus rostral partcontraRMgR0.5
Raphe obscurus nucleuscontraROb0.5
Caudal medulla oblongatacontraCMeOb-2
Cuneate nucleuscontraCu0
Paragigantocellular reticular nucleuscontraPGi0
Lateral paragigantocellular nucleuscontraLPGi-0.5
Lateral paragigantocellular nucleus retrofacial partcontraLPGirf0.5
Lateral paragigantocellular nucleus rostral partcontraLPGiR1
Nucleus of the horizontal limb of the diagonal bandcontraHDB0
Substantia innominatacontraSI0.5
Lateral preoptic areacontraLPO0.5
Medial preoptic areacontraMPA0.5
Magnocellular preoptic nucleuscontraMCPO0.5
Dorsomedial hypothalamic nucleuscontraDMHy0
Lateral hypothalamic areacontraLH0.5
Anterior hypothalamic areacontraAHA0.5
Dorsal hypothalamic areacontraDA0
Posterior hypothalamic nucleuscontraPH0.5
Tuberal area lateral partcontraTAL0
Tuberal area medial partcontraTAm0
Ventromedial hypothalamic nucleuscontraVMH0
Arcuate nucleuscontraArc0
Periventricular hypothalamic nucleuscontraPe0
Premammillary nucleus dorsal partcontraPMD0
Perifornical nucleuscontraPeF0
Zona incertacontraZI0.5
Tuber cinereum areacontraTC0
Lateral habenular nucleuscontraLHb0
Anterior pretectal nucleuscontraAPT0.5
Bed nucleus of the stria terminaliscontraBST0
Central amygdaloid nucleuscontraCe0
Cingulate cortexcontraCg0
Prefrontal cortexcontraPFC0
Ventral geniculate nucleuscontraVG0

Input from

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal gray caudal partipsiPAGvlc2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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