University of Rostock

Department of Anatomy

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Rat connectome



Deep white layer of the superior colliculus left


Abbreviation
DpWh
Color       
Superior regionsSuperior colliculus deep layers

SynonymsAbbr.Language
 SCdw 
Superior colliculus deep white layer  
Lamina VII of the superior colliculus  
Lamina 7 of the superior colliculus  
Layer 7 of the superior colliculus  
Stratum album profundum of the superior colliculus Eng
Stratum album profundum Eng
Deep white layer of the superior colliculusDpWhEng
Deep white  
Lower part of the inferior portion of thewhite layers of the superior colliculus Eng

SubregionsSide
Deep white layer of the superior colliculus rostral partleft
Lateral portion deep white layer of the superior colliculusleft
Caudolateral stratum album profundum of the superior colliculusleft
Medial part of the stratum album profundum of the superior colliculusleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal gray rostral partipsiPAGR3
Deep mesencephalic nucleusipsiDpMe3
Facial nucleus intermediate partipsi7i1
Facial nucleus lateral subnucleusipsi7L0.5
Facial nucleus dorsal intermediate subnucleusipsi7DI1
Juxtatrigeminal areaipsiJx5-0.5
Juxtatrigeminal area medial partipsiJx5me1
Trigeminal sensory nuclear complexipsiTSNC-0.5
Principal sensory trigeminal nucleus ventromedial partipsiPr5vm2
Principal sensory trigeminal nucleus posterior partipsiPr5p1
Principal sensory trigeminal nucleus centromedial part of the posterior partipsiPr5cmp1
Spinal trigeminal nucleus oral part ventromedial partipsiSp5OVM-0.5
Ventrocaudal part of the oral spinal trigeminal nucleusipsiSp5Ovc1
Junction of principal trigeminal nucleus and spinal trigeminal nucleus oral partipsiPr5JSp5O-0.5
Ventromedial part of the junction of principal trigeminal nucleus and spinal trigeminal nucleus oral partipsiPr5JSp5Ovm1
Rostral ventral respiratory groupipsiRVRG0.5
Suprachiasmatic nucleusipsiSCh2
Parafascicular thalamic nucleus lateral partipsiPFL0.5
Posterior thalamic nuclear groupipsiPo1
Zona incertaipsiZI1
Facial nucleus intermediate partcontra7i2
Facial nucleus lateral subnucleuscontra7L1
Facial nucleus dorsal intermediate subnucleuscontra7DI2
Juxtatrigeminal area medial partcontraJx5me2
Principal sensory trigeminal nucleus ventral partcontraPr5v1
Principal sensory trigeminal nucleus posterior partcontraPr5p2
Principal sensory trigeminal nucleus centromedial part of the posterior partcontraPr5cmp2
Ventrocaudal part of the oral spinal trigeminal nucleuscontraSp5Ovc2
Ventromedial part of the junction of principal trigeminal nucleus and spinal trigeminal nucleus oral partcontraPr5JSp5Ovm2
Rostral ventral respiratory groupcontraRVRG0.5
Zona incertacontraZI0
Stellate ganglionipsiAutoSteG0.5

Input from

NameSideAbbr.WeightDetails
Superior colliculus superficial layers commissural neuronsipsiSCscn-0.5
Substantia nigra reticular partipsiSNR0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Posterior interposed nucleusipsiCERpin0
Medial cerebellar nucleusipsiMed0
Pontomesencephalic grayipsiPoMG-0.5
Principal sensory trigeminal nucleusipsiPr53
Rostral ventral respiratory groupipsiRVRG1
Retrosplenial cortexipsiRSCx-0.5
Whisker motor cortex A1ipsiWMCxA10.5
Secondary visual cortex lateral areaipsiV2L1
Substantia nigra reticular partcontraSNR0.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
Pedunculopontine tegmental nucleuscontraPPTg-0.5
Posterior interposed nucleuscontraCERpin1
Medial cerebellar nucleuscontraMed3
Pontomesencephalic graycontraPoMG-0.5
Principal sensory trigeminal nucleuscontraPr53
Spinal trigeminal nucleus interpolar partcontraSp5I3
Trigeminal subnucleus caudaliscontra5SSC3
Rostral ventral respiratory groupcontraRVRG1
Whisker motor cortex A1contraWMCxA11

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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