University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Parafascicular thalamic nucleus lateral part left


Abbreviation
PFL
Color       
Superior regionsParafascicular thalamic nucleus

SynonymsAbbr.Language
Parafascicular thalamic nucleus lateral partPFLEng
Lateral portion of the parafascicular thalamic nucleus Eng
Lateral parafascicular thalamic nucleuslPFEng
Lateral parafascicular nucleus Eng

SubregionsSide
Dorsal division of the lateral parafascicular thalamic nucleusleft
Dorsal two thirds of the parafascicular thalamic nucleus lateral partleft
Lateral parafascicular thalamic nucleus lateral partleft
Lateral parafascicular thalamic nucleus medial partleft
Ventral one third of the parafascicular thalamic nucleus lateral partleft
Ventral part of the lateral parafascicular thalamic nucleusleft

Output to

NameSideAbbr.WeightDetails
Dorsomedial periaqueductal grayipsiDMPAG1
Lateral periaqueductal grayipsiLPAG1
Red nucleusipsiR1
Superior colliculusipsiSC3
Substantia nigra compact partipsiSNC3
Substantia nigra reticular partipsiSNR2
Reticulotegmental nucleus of the ponsipsiRtTg1
Pontine reticular nucleusipsiPRN2
Principal sensory trigeminal nucleusipsiPr51
Raphe nucleiipsiRAN2
Dorsal raphe nucleusipsiDR3
Raphe magnus nucleusipsiRMg1
Raphe pallidus nucleusipsiRPa2
Centrolateral thalamic nucleusipsiCL1
Posterior thalamic nuclear groupipsiPo1
Mediodorsal thalamic nucleusipsiMD1
Reticular thalamic nucleusipsiRt-0.5
Zona incertaipsiZI-0.5
Nucleus of the fields of ForelipsiF1
Globus pallidusipsiGP2
StriatumipsiSTR-0.5
Accumbens nucleus rostrolateral partipsiAcRL1
Lateral accumbens shellipsiAcbShl3
Caudate putamenipsiCPu3
Associative striatumipsiACPu3
Dorsal striatumipsiCPud-0.5
Dorsolateral striatumipsiCPudl3
Dorsal striatum rostrodorsal partipsiCPudrd3
Ventral striatumipsiCPuv-0.5
Ventrolateral striatumipsiCPuvl2.5
Lateral striatumipsiCPul3
Subthalamic nucleusipsiSTh2
Subthalamic nucleus lateral partipsiSThl3
Subthalamic nucleus medial partipsiSThM3
Subthalamic nucleus medial one-thirdipsiSThMot2
Cingulate cortexipsiCg1
Frontal association cortexipsiFrA2
Parietal cortex area 1 caudal partipsiPar1c1
Parietal cortex area 1 dorsolateral partipsiPar1dL2
Lateral agranular prefrontal cortexipsiAGl2
Medial agranular prefrontal cortexipsiAGm1
Medial agranular prefrontal cortex anterior partipsiAGmA2
Medial agranular prefrontal cortex caudal partipsicAGm0.5
Medial agranular prefrontal cortex lateral partipsiAGmL2
Secondary visual cortexipsiV21
Lateral orbital cortexipsiLO2
Ventral lateral geniculate nucleusipsiVLG-0.5
Olfactory tubercleipsiTuO1
Ventral horn C1ipsiVHC1-3
Ventral horn C2ipsiVHC21
Ventral horn C3ipsiVHC31
Ventral horn C4ipsiVHC41
Ventral horn C5ipsiVHC51
Ventral horn C6ipsiVHC61
Ventral horn C7ipsiVHC71
Ventral horn C8ipsiVHC81
Dorsomedial periaqueductal graycontraDMPAG1
Lateral periaqueductal graycontraLPAG1
Substantia nigra compact partcontraSNC3
Substantia nigra reticular partcontraSNR2
Principal sensory trigeminal nucleuscontraPr52
Raphe nucleicontraRAN2
Raphe magnus nucleuscontraRMg1
Raphe pallidus nucleuscontraRPa2
Ventral horn C1contraVHC11
Ventral horn C2contraVHC21
Ventral horn C3contraVHC31
Ventral horn C4contraVHC41
Ventral horn C5contraVHC51
Ventral horn C6contraVHC61
Ventral horn C7contraVHC71
Ventral horn C8contraVHC81

Input from

NameSideAbbr.WeightDetails
Paralemniscal nucleusipsiPL0
Nucleus of DarkschewitschipsiDk4
Periaqueductal grayipsiPAG3
Aqueductal part of periaqueductal grayipsiAPAG1
Superior colliculusipsiSC2
Superior colliculus lateral partipsiSCL3
Deep white layer of the superior colliculusipsiDpWh0.5
Superior colliculus medial partipsimSC2
Superior colliculus ventrolateral partipsiSCVL-0.5
Central tegmental fieldipsiTGAC3
Peduncularpontine nucleusipsiPPN3
Subpeduncular tegmental nucleusipsiSPTg2
Substantia nigra A9ipsiSN3
Substantia nigra compact partipsiSNC4
Substantia nigra reticular partipsiSNR4
Substantia nigra reticular part caudal tieripsiSNRca2
Ventral tegmental area A10ipsiVTA2
Parabrachial pigmented nucleusipsiPBP3
Caudal linear nucleus of the rapheipsiCLi1
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg4
Interstitial nucleus of CajalipsiInC4
A5 noradrenaline cellsipsiA51
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC2
Nucleus incertusipsiNI0
Dorsomedial tegmental areaipsiDMTg3
Prepositus nucleusipsiPr2
Intermediate reticular nucleusipsiIRt3
Deep mesencephalic nucleusipsiDpMe4
Pontine reticular nucleus oral partipsiPnO4
Pontine reticular nucleus ventral partipsiPnV1
Pontine reticular nucleus caudal partipsiPNC4
Cuneiforme nucleusipsiCnF2
Parabrachial nucleusipsiPB0.5
Parabrachial nucleus external divison lateral partipsiPBeDL2
Parabrachial nucleus ventrolateral partipsiPBveLa0.5
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA1
Medullary reticular nucleusipsiMdD3
Subnucleus reticularis dorsalisipsiSRD3
Medullary reticular nucleus ventral partipsiMdV3
Ventral medullary reticular formationipsiVMurF0.5
Parvicellular reticular nucleusipsiPCRt3
Subcoeruleus nucleusipsiSubC2
Boetzinger complexipsiBo0.5
Principal sensory trigeminal nucleusipsiPr51
Spinal trigeminal nucleusipsiSp5nc-0.5
Spinal trigeminal nucleus caudal partipsiSp5C2
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus oral partipsiSp5O1
Spinal vestibular nucleusipsiSpVe2
Vestibular nucleiipsiVnc3
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe2
Medial vestibular nucleus medial partipsiMVeM2
Medial vestibular nucleus rostral partipsiMVeR2
Medial vestibular nucleus ventral partipsiMVeV2
Lateral vestibular nucleusipsiLVe2
Medial half of the lateral vestibular nucleus rostral partipsiLVeRM2
Inferior vestibular nucleusipsiIVN2
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR0.5
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus dorsal partipsiDRD4
Dorsal raphe nucleus ventral partipsiDRV4
Dorsal raphe nucleus ventrolateral partipsiDRVL4
Rostral linear nucleus of the rapheipsiRLi2
Median raphe nucleusipsiMnR2
Paramedian raphe nucleusipsiPMnR3
Raphe interpositus nucleusipsiRIP2
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa0
Caudal ventrolateral medullaipsiCVLM0.5
Rostral ventrolateral medullaipsiRVLM2
Cuneate nucleusipsiCu3
Gracile nucleus principal partipsiGr2
Dorsal paragigantocellular nucleusipsiDPGi4
Lateral paragigantocellular nucleusipsiLPGi2
Lateral hypothalamic areaipsiLH2
A8 dopamine cells retrorubral groupipsiRRF2
Zona incertaipsiZI2
Medial globus pallidusipsiMGP-0.5
Subthalamic nucleus lateral partipsiSThl2.5
Subthalamic nucleus middle partipsiSThm1
Interpeduncular nucleusipsiIP2
Intermediate zone of spinal cordipsiIzMES0.5
Superior colliculus lateral partcontraSCL1
Superior colliculus medial partcontramSC1
Substantia nigra reticular part caudal tiercontraSNRca1
Superior vestibular nucleuscontraSuVe1
Medial vestibular nucleuscontraMVe1
Medial vestibular nucleus caudal partcontraMVeP1
Medial vestibular nucleus medial partcontraMVeM1.5
Medial vestibular nucleus rostral partcontraMVeR1.5
Medial vestibular nucleus ventral partcontraMVeV1
Lateral vestibular nucleuscontraLVe0.5
Inferior vestibular nucleuscontraIVN1
Subthalamic nucleuscontraSTh0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications