University of Rostock

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Rat connectome



Juxtatrigeminal area left


Abbreviation
Jx5
Color       
Superior regionsNuclei of the trigeminal complex

SynonymsAbbr.Language
Juxtatrigeminal areaJx5Eng
Juxtatrigeminal region Eng

SubregionsSide
Juxtatrigeminal area caudal partleft
Juxtatrigeminal area dorsal partleft
Juxtatrigeminal area medial partleft
Juxtatrigeminal area rostral partleft
Juxtatrigeminal area ventral partleft

Output to

NameSideAbbr.WeightDetails
Facial nucleusipsi7-0.5
Facial nucleus intermediate partipsi7i3
Facial nucleus dorsal intermediate subnucleusipsi7DI3
Hypoglossal motor nucleusipsi12M-0.5
Intertrigeminal nucleusipsiI5-0.5
Juxtatrigeminal areaipsiJx5-0.5
Supratrigeminal nucleusipsiSu5-0.5
Motor trigeminal nucleusipsiMo53
Motor trigeminal nucleus jaw closing componentipsiMo5jcc4
Motor trigeminal nucleus jaw opening componentipsiMo5joc4
Spinal trigeminal nucleus oral part caudolateral partipsiSp5OcL1
Submedius thalamic nucleusipsiSub1
Ventral posteromedial thalamic nucleusipsiVPM-0.5
Facial nucleuscontra7-0.5
Intertrigeminal nucleuscontraI5-0.5
Juxtatrigeminal areacontraJx5-0.5
Supratrigeminal nucleuscontraSu5-0.5
Motor trigeminal nucleuscontraMo51
Motor trigeminal nucleus jaw closing componentcontraMo5jcc3
Motor trigeminal nucleus jaw opening componentcontraMo5joc3
Submedius thalamic nucleuscontraSub2
Ventral posteromedial thalamic nucleuscontraVPM-0.5

Input from

NameSideAbbr.WeightDetails
Dorsal periaqueductal grayipsiDPAG3
Dorsolateral periaqueductal grayipsiDLPAG3
Caudal part of the medial periaqueductal grayipsiPAGmc3
Ventral periaqueductal grayipsiVPAG1
Ventrolateral periaqueductal grayipsiVLPAG3
Superior colliculus lateral part layer 5ipsiSCL5-0.5
Superior colliculus lateral part layer 6ipsiSCL6-0.5
Superior colliculus lateral part layer 3ipsiSCL3-0.5
Superior colliculus lateral part layer 4ipsiSCL4-0.5
Superior colliculus lateral part layer 1ipsiSCL1-0.5
Superior colliculus lateral part layer 2ipsiSCL2-0.5
Intermediate gray layer of the superior colliculusipsiInG-0.5
Deep white layer of the superior colliculusipsiDpWh-0.5
Superior colliculus medial part layer 5ipsimSCdL5-0.5
Superior colliculus medial part layer 4ipsimSCdLa4-0.5
Superior colliculus medial part layer 2ipsimSCL2-0.5
Superior colliculus medial part layer 1ipsimSCL1-0.5
Superior colliculus medial part layer 3ipsimSCL3-0.5
Intermediate reticular nucleusipsiIRt-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Gigantocellular reticular nucleusipsiGi-0.5
Gigantocellular reticular nucleus alpha partipsiGiA-0.5
Parvicellular reticular nucleus alpha partipsiPCRtA-0.5
Intertrigeminal nucleusipsiI5-0.5
Juxtatrigeminal areaipsiJx5-0.5
Supratrigeminal nucleusipsiSu5-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Motor trigeminal nucleusipsiMo5-0.5
Principal sensory trigeminal nucleusipsiPr5-0.5
Spinal trigeminal nucleus interpolar partipsiSp5I-0.5
Spinal trigeminal nucleus oral partipsiSp5O-0.5
Dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODM-1
Peritrigeminal zoneipsiP5-0.5
Nucleus of the solitary tractipsiSol-0.5
Dorsal raphe nucleusipsiDR3
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa-0.5
Lateral hypothalamic areaipsiLH-0.5
Central amygdaloid nucleusipsiCe-0.5
Parasubthalamic nucleusipsiPSTh-0.5
Lateral agranular prefrontal cortexipsiAGl-0.5
Primary somatosensory cortexipsiS12
Primary somatosensory cortex rostral most partipsiS1rm-0.5
Dorsal periaqueductal graycontraDPAG1
Dorsolateral periaqueductal graycontraDLPAG1
Caudal part of the medial periaqueductal graycontraPAGmc1
Ventral periaqueductal graycontraVPAG0.5
Ventrolateral periaqueductal graycontraVLPAG1
Intermediate reticular nucleuscontraIRt-0.5
Pontine reticular nucleus caudal partcontraPNC-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Gigantocellular reticular nucleus alpha partcontraGiA-0.5
Parvicellular reticular nucleus alpha partcontraPCRtA-0.5
Intertrigeminal nucleuscontraI5-0.5
Juxtatrigeminal areacontraJx5-0.5
Supratrigeminal nucleuscontraSu5-0.5
Mesencephalic trigeminal nucleuscontraMe5-0.5
Motor trigeminal nucleuscontraMo5-0.5
Principal sensory trigeminal nucleuscontraPr5-0.5
Spinal trigeminal nucleus interpolar partcontraSp5I-0.5
Spinal trigeminal nucleus oral partcontraSp5O-0.5
Peritrigeminal zonecontraP5-0.5
Nucleus of the solitary tractcontraSol-0.5
Dorsal raphe nucleuscontraDR1
Lateral hypothalamic areacontraLH-0.5
Central amygdaloid nucleuscontraCe-0.5
Parasubthalamic nucleuscontraPSTh-0.5
Middle part of the caudal one-third of the dysgranular insular cortexcontraDIvCotMi1
Caudal part of the caudal one-third of the dysgranular insular cortexcontraDIvCotC1
Caudal part of the caudal one-third of the granular insular cortexcontraGICotC1
Middle part of the caudal one-third of the granular insular cortexcontraGICotM1
Lateral agranular prefrontal cortexcontraAGl-0.5
Primary somatosensory cortexcontraS13
Primary somatosensory cortex rostral most partcontraS1rm-0.5
Musculus masseteripsiMuscMass-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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