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Rat connectome



Retrosplenial granular cortex layer 5 left


Abbreviation
RSGL5
Color       
Superior regionsDeep layers of retrosplenial granular cortex

SynonymsAbbr.Language
Retrosplenial granular cortex layer 5RSGL5 

Output to

NameSideAbbr.WeightDetails
Lateral periaqueductal grayipsiLPAG2
Ventrolateral periaqueductal grayipsiVLPAG2
Superior colliculus deep white layeripsiSAP3
Superior colliculus deep white layer lateral partipsiSAPL1
Optic nerve layer of the superior colliculusipsiOp3
Superficial gray layer of the superior colliculusipsiSuG0.5
Intermediate gray layer of the superior colliculusipsiInG3
Intermediate white layer of the superior colliculusipsiInWh3
Deep gray layer of the superior colliculusipsiDpG3
Superior colliculus lateromedial extentipsiSCLM3
Rostrocaudal extent of the superior colliculusipsiSCRC3
Tegmental areaipsiTGA0.5
Reticulotegmental nucleusipsiRETn0.5
Pontine nucleiipsiPn1
ThalamusipsiT-0.5
Anterodorsal thalamic nucleusipsiAD3
Anteromedial thalamic nucleusipsiAM2
Anteroventral thalamic nucleusipsiAV3
Laterodorsal thalamic nucleusipsiLD3
Pretectal regionipsiPRT-2
Subiculum temporal part layer 1ipsiSTeL13
Subiculum temporal part layer 5ipsiSTeL53
Parahippocampal regionipsiPHR-0.5
Presubiculum temporal part layer 1ipsiPrSTL11
Presubiculum temporal part layer 3ipsiPrSTL33
Presubiculum temporal part layer 5ipsiPrSTL53
Presubiculum temporal part layer 6ipsiPrSTL63
Parasubiculum layer 1ipsiPaSL11
Parasubiculum layer 2ipsiPaSL21
Parasubiculum layer 3ipsiPaSL31
Parasubiculum layer 4ipsiPaSL43
Parasubiculum layer 5ipsiPaSL53
Parasubiculum layer 6ipsiPaSL63
Entorhinal cortex layer 5ipsiEntL53
Entorhinal cortex layer 6ipsiEntL63
Entorhinal cortex layer 3ipsiEntL33
Entorhinal cortex layer 1ipsiEntL13
Frontal association cortexipsiFrA0
Lateral agranular prefrontal cortexipsiAGl3
Medial prefrontal cortex layer 5ipsimPFCL53
Medial prefrontal cortex layer 6ipsimPFCL63
Medial prefrontal cortex layer 3ipsimPFCL33
Medial prefrontal cortex layer 4ipsimPFCL43
Primary somatosensory cortex barrel fieldipsiS1BF3
Visual regionsipsiVR1
Primary visual cortex rostral partipsiV1R2
Pyramidal tractipsipy0
Superior colliculus deep white layercontraSAP-0.5
Optic nerve layer of the superior colliculuscontraOp-0.5
Intermediate gray layer of the superior colliculuscontraInG-0.5
Intermediate white layer of the superior colliculuscontraInWh-0.5
Deep gray layer of the superior colliculuscontraDpG-0.5
Pontine nucleicontraPn0.5
Anterodorsal thalamic nucleuscontraAD1
Anteromedial thalamic nucleuscontraAM2
Anteroventral thalamic nucleuscontraAV3
Laterodorsal thalamic nucleuscontraLD1
Subiculum temporal part layer 1contraSTeL11.5
Subiculum temporal part layer 5contraSTeL51.5
Parahippocampal regioncontraPHR-0.5
Presubiculum temporal part layer 1contraPrSTL10.5
Presubiculum temporal part layer 3contraPrSTL31.5
Presubiculum temporal part layer 5contraPrSTL51.5
Presubiculum temporal part layer 6contraPrSTL61.5
Parasubiculum layer 1contraPaSL10.5
Parasubiculum layer 2contraPaSL20.5
Parasubiculum layer 3contraPaSL30.5
Parasubiculum layer 4contraPaSL41.5
Parasubiculum layer 5contraPaSL51.5
Parasubiculum layer 6contraPaSL61.5
Entorhinal cortex layer 3contraEntL31.5
Entorhinal cortex layer 5contraEntL51.5
Entorhinal cortex layer 6contraEntL61.5
Entorhinal cortex layer 1contraEntL11.5
Medial prefrontal cortex layer 5contramPFCL51.5
Medial prefrontal cortex layer 6contramPFCL61.5
Medial prefrontal cortex layer 3contramPFCL31.5
Medial prefrontal cortex layer 4contramPFCL41.5

Input from

NameSideAbbr.WeightDetails
Basal forebrainipsiBAF-2
Subiculum pyramidal cell layer superficial two-thirdsipsiSuL4stt-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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