University of Rostock

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Rat connectome



Lateral part of the granular cortex of forelimb motor regions left


Abbreviation
LFMCx
Color       
Superior regionsForelimb motor cortex

SynonymsAbbr.Language
Lateral part of the granular cortex of forelimb motor regionsLFMCxEng

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk3
Lateral periaqueductal grayipsiLPAG1
Rostral medial aspect of the red nucleusipsiRrmed1
Red nucleus ventral partipsiRV-2
Inferior colliculusipsiICOL0
Superior colliculus deep layersipsiSCd1
Substantia nigra A9ipsiSN-2
Pons caudal partipsiPca3
Pontine gray rostral partipsiPGro3
Caudal pole region of the pontine nucleiipsiBPNcP0
Rostral one-third of the pontine nucleiipsiBPNrot3
Reticular systemipsiRF-2
Medial reticular formationipsiRFm1
Caudalmost mesencephalic reticular formationipsicmMRF-2
Parabrachial nucleus medialipsiPBnMe1
Medullary reticular nucleusipsiMdD1
Trapezoid bodyipsitz-2
Pons ventral to the cerebral peduncleipsiPcepe-2
Pons ventrolateral to the cerebral peduncleipsiPvLcepe3
Pons medial to the cerebral peduncleipsiPmcepe3
Pons dorsal to the cerebral peduncleipsiPdcepe3
Medulla oblongataipsiMeOb-2
Nucleus of the solitary tract rostral partipsiSolro1
Cuneate nucleusipsiCu1
Inferior olive dorsal nucleus medial partipsiIODm3
Inferior olive dorsal nucleus rostral partipsiIODR3
Caudal half of the inferior olive medial nucleusipsiIOMch3
Inferior olive principal nucleus lateral bendipsiIOPrLb3
Ventrobasal complex lateral partipsiVBL0
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT1
Cerebral peduncle basal partipsicp-2
Midportion of the cerebral peduncleipsimpcp-2
Corpus callosumipsicc-2
Corticospinal tract in the dorsal funiculusipsicsdfu-2
Rostrolateral striatumipsiCPurl-0.5
Spinal cordipsiMES1
Ventral gray of spinal cordipsiVGMES1
Intermediate zone of spinal cordipsiIzMES1
Pyramidal tractipsipy-2
Ventral funiculusipsivf-2
Ventral to the intermediate spinal gray matteripsiVimsgm1.5
Nucleus of DarkschewitschcontraDk1
Pontine nucleus medial partcontraBPNm1
Reticular systemcontraRF3
Dorsolateral reticular formationcontraDLRF3
Cuneiforme nucleus ventral partcontraCnFV1
Medullary reticular nucleuscontraMdD1
Parvicellular reticular nucleuscontraPCRt3
Spinal trigeminal nucleus interpolar partcontraSp5I3
Trigeminal subnucleus caudaliscontra5SSC2
Nucleus of the solitary tract rostral partcontraSolro1
Cuneate nucleuscontraCu2
Cuneate nucleus rostral partcontraCuRo3
Cuneate nucleus ventral partcontraCuV3
GracilecontraGra2
Medulla oblongata rostral partcontraMeObR1
Spinomedullary junctioncontraSMJ3
Corticospinal tract in the dorsal funiculuscontracsdfu-2
Rostrolateral striatumcontraCPurl-0.5
Dorsal horn of spinal cordcontraDHMES1.5
Ventral gray of spinal cordcontraVGMES3
Intermediate zone of spinal cordcontraIzMES3

Input from

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk3
Lateral periaqueductal grayipsiLPAG1
Rostral medial aspect of the red nucleusipsiRrmed1
Red nucleus ventral partipsiRV-2
Inferior colliculusipsiICOL0
Superior colliculus deep layersipsiSCd1
Substantia nigra A9ipsiSN-2
Pons caudal partipsiPca3
Pontine gray rostral partipsiPGro3
Caudal pole region of the pontine nucleiipsiBPNcP0
Rostral one-third of the pontine nucleiipsiBPNrot3
Reticular systemipsiRF-2
Medial reticular formationipsiRFm1
Caudalmost mesencephalic reticular formationipsicmMRF-2
Parabrachial nucleus medialipsiPBnMe1
Medullary reticular nucleusipsiMdD1
Trapezoid bodyipsitz-2
Pons ventral to the cerebral peduncleipsiPcepe-2
Pons ventrolateral to the cerebral peduncleipsiPvLcepe3
Pons medial to the cerebral peduncleipsiPmcepe3
Pons dorsal to the cerebral peduncleipsiPdcepe3
Medulla oblongataipsiMeOb-2
Nucleus of the solitary tract rostral partipsiSolro1
Cuneate nucleusipsiCu1
Inferior olive dorsal nucleus medial partipsiIODm3
Inferior olive dorsal nucleus rostral partipsiIODR3
Caudal half of the inferior olive medial nucleusipsiIOMch3
Inferior olive principal nucleus lateral bendipsiIOPrLb3
DiencephalonipsiDEC3
Centrolateral thalamic nucleusipsiCL3
Parafascicular thalamic nucleusipsiPF3
Posterior thalamic nuclear groupipsiPo3
Ventrolateral thalamic nucleusipsiVL3
Ventrobasal complex lateral partipsiVBL0
Ventrobasal thalamic complex ventromedial partipsiVBvm3
Ventral medial nucleus of the thalamusipsiVMT3
Zona incertaipsiZI3
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT1
Cerebral peduncle basal partipsicp-2
Midportion of the cerebral peduncleipsimpcp-2
Corpus callosumipsicc-2
Corticospinal tract in the dorsal funiculusipsicsdfu-2
Rostrolateral striatumipsiCPurl-0.5
Spinal cordipsiMES1
Ventral gray of spinal cordipsiVGMES1
Intermediate zone of spinal cordipsiIzMES1
Pyramidal tractipsipy-2
Ventral funiculusipsivf-2
Ventral to the intermediate spinal gray matteripsiVimsgm1.5
Nucleus of DarkschewitschcontraDk1
Pontine nucleus medial partcontraBPNm1
Reticular systemcontraRF3
Dorsolateral reticular formationcontraDLRF3
Cuneiforme nucleus ventral partcontraCnFV1
Medullary reticular nucleuscontraMdD1
Parvicellular reticular nucleuscontraPCRt3
Spinal trigeminal nucleus interpolar partcontraSp5I3
Trigeminal subnucleus caudaliscontra5SSC2
Nucleus of the solitary tract rostral partcontraSolro1
Cuneate nucleuscontraCu2
Cuneate nucleus rostral partcontraCuRo3
Cuneate nucleus ventral partcontraCuV3
GracilecontraGra2
Medulla oblongata rostral partcontraMeObR1
Spinomedullary junctioncontraSMJ3
Corticospinal tract in the dorsal funiculuscontracsdfu-2
Rostrolateral striatumcontraCPurl-0.5
Dorsal horn of spinal cordcontraDHMES1.5
Ventral gray of spinal cordcontraVGMES3
Intermediate zone of spinal cordcontraIzMES3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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