University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Nucleus of Darkschewitsch right


Abbreviation
Dk
Color       
Superior regionsMesencephalon

SynonymsAbbr.Language
Darkewitsch nucleus  
Ventral nucleus of the posterior commissure  
Darkshevich's nucleus  
Nucleus fasciculi longitudinalis medialis  
Nucleus accessorius Eng
Nucleus Darkschewitsch  
Darkshewitch nucleus Eng
Nucleus of DarkschewitschNDEng
Nucleus Darkshevich  
Darckewitsch nucleus Eng
Nucleus of DarkschewitschDkEng
Nucleus of Darkschewitsch  
Nucleus of DarkschewitschDKEng

SubregionsSide
Nucleus of Darkschewitsch caudal partright
Nucleus of Darkschewitsch rostral partright

Output to

NameSideAbbr.WeightDetails
Nuclei of the lateral lemniscuscontraNLL0
Oculomotor nucleuscontra3-0.5
Central tegmental field dorsal partcontraTGACd1
Ventrolateral tegmental areacontraVLTg1
Laterodorsal tegmental nucleuscontraLDTg1
Ventral tegmental nucleuscontraVTg0.5
Dorsal tegmental nucleuscontraDTg0.5
Pedunculopontine tegmental nucleuscontraPPTg0
Edinger Westphal nucleuscontraEW-0.5
Cerebellar lobule 9contraCERL9-0.5
Cerebellar lobule 10contraCERL10-0.5
FlocculuscontraFl-0.5
Locus coeruleuscontraLC0.5
Prepositus nucleuscontraPr1
Pontine reticular nucleuscontraPRN3
Pontine reticular nucleus caudal partcontraPNC1
Facial nucleuscontra71
Facial nucleus dorsolateral subnucleuscontra7DL1
Facial nucleus lateral subnucleuscontra7L0
Facial nucleus medial partcontra7M1
Facial nucleus ventral partcontra7V0
Facial nucleus dorsal intermediate subnucleuscontra7DI0
Raphe pallidus nucleuscontraRPa2
Inferior olivecontraIO3
Medial septal nucleuscontraMS1
Posterior region [Lateral division of the hypothalamus]contraPReg0
Lateral posterior thalamic nucleuscontraLP1
Laterodorsal thalamic nucleuscontraLD1
Zona incertacontraZI1
Dorsolateral funiculuscontradlft-0.5
Subthalamic nucleuscontraSTh1
Forelimb motor cortexcontraFMCx1
Caudal forelimb motor areacontraCFMA1
Lateral part of the granular cortex of forelimb motor regionscontraLFMCx1
Spinal cordcontraMES-0.5
Cervical segment 1contraCS10.5
Cervical segment 2contraCS20.5
Cervical segment 3contraCS30.5
Cervical segment 4contraCS40.5
Cervical segment 5contraCS50.5
Cervical segment 6contraCS60.5
Cervical segment 7contraCS70.5
Cervical segment 8contraCS80.5
Thoracal segment 1contraT10.5
Thoracal segment 2contraT20.5
Thoracal segment 3contraT30.5
Thoracal segment 4contraT40.5
Thoracal segment 5contraT50.5
Thoracal segment 6contraT60.5
Thoracal segment 7contraT70.5
Thoracal segment 8contraT80.5
Thoracal segment 9contraT90.5
Thoracal segment 10contraT100.5
Thoracal segment 11contraT110.5
Thoracal segment 12contraT120.5
Thoracal segment 13contraT130.5
Lumbar segment 1contraL10.5
Intermediomedial cell column L1contraIMML11
Lumbar segment 2contraL20.5
Intermediomedial cell column L2contraIMML21
Lumbar segment 3contraL30.5
Intermediomedial cell column L3contraIMML31
Lumbar segment 4contraL40.5
Intermediomedial cell column L4contraIMML41
Lumbar segment 5contraL50.5
Intermediomedial cell column L5contraIMML51
Lumbar segment 6contraL60.5
Intermediomedial cell column L6contraIMML61
Sacral segment 1contraSa10.5
Sacral segment 2contraSa20.5
Sacral segment 3contraSa30.5
Sacral segment 4contraSa40.5
Coccygeal segment 1contraCo10.5
Coccygeal segment 2contraCo20.5
Coccygeal segment 3contraCo30.5
Nuclei of the lateral lemniscusipsiNLL0
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi33
Central tegmental field dorsal partipsiTGACd1
Ventral tegmental area A10ipsiVTA-0.5
Ventrolateral tegmental areaipsiVLTg2
Lateral tegmental nucleusipsiLTN-0.5
Laterodorsal tegmental nucleusipsiLDTg1
Ventral tegmental nucleusipsiVTg3
Dorsal tegmental nucleusipsiDTg1
Dorsal tegmental nucleus ventromedial partipsiDTgVM1
Pedunculopontine tegmental nucleusipsiPPTg0
Edinger Westphal nucleusipsiEW3
Paraflocculus ventral partipsiPFlv2
Cerebellar lobule 9ipsiCERL9-0.5
Cerebellar lobule 10ipsiCERL10-0.5
FlocculusipsiFl2
Locus coeruleusipsiLC1
Parapyramidal nucleusipsiPPy1
Prepositus nucleusipsiPr1
Mesencephalic reticular formationipsiMRF1
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus caudal partipsiPNC1
Facial nucleusipsi71
Facial nucleus dorsolateral subnucleusipsi7DL0
Facial nucleus lateral subnucleusipsi7L1
Facial nucleus medial partipsi7M1
Facial nucleus ventral partipsi7V1
Facial nucleus dorsal intermediate subnucleusipsi7DI0
Hypoglossal nucleusipsi12S-0.5
Hypoglossal motor nucleusipsi12M1
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR-0.5
Raphe magnus nucleusipsiRMg-0.5
Raphe pallidus nucleusipsiRPa1
Olivary nucleusipsiON-0.5
Inferior oliveipsiIO4
Inferior olive dorsal nucleusipsiIOD3
Inferior olive dorsal nucleus lateral partipsiIODL2
Inferior olive medial nucleusipsiIOM3
Inferior olive medial nucleus lateral partipsiIOML2
Inferior olive medial nucleus rostral partipsiIOMr3
Inferior olive ventrolateral protrusionipsiIOVL3
Inferior olive principal nucleusipsiIOPr3
Inferior olive principal nucleus rostral partipsiIOPrR2
Paragigantocellular reticular nucleus rostral partipsiPGiR1
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Medial septal nucleusipsiMS3
Medial preoptic nucleusipsiMPO0
Posterior region [Lateral division of the hypothalamus]ipsiPReg0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Anteroventral thalamic nucleusipsiAV2
Central medial thalamic nucleusipsiCM1
Central medial thalamic nucleus lateral partipsiCMl2
Centrolateral thalamic nucleusipsiCL4
Paracentral thalamic nucleusipsiPC2
Paracentral thalamic nucleus caudal partipsiPC-c2
Paracentral thalamic nucleus rostral partipsiPC-r1
Parafascicular thalamic nucleus lateral partipsiPFL4
Parafascicular thalamic nucleus medial partipsiPFM3
Rhomboid thalamic nucleusipsiRh3
Mediodorsal thalamic nucleusipsiMD1
Intermediodorsal thalamic nucleusipsiIMD0
Mediodorsal thalamic nucleus lateral partipsiMDL2
Submedius thalamic nucleusipsiSub1
Paratenial thalamic nucleusipsiPT2
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus medial partipsiPVM0
Paraventricular thalamic nucleus middle divisionipsiPVMiD1
Paraventricular thalamic nucleus posterior partipsiPVP0
Reuniens thalamic nucleusipsiRe3
Ventral posterior thalamic nucleus parvicellular partipsiVPPC0
Ventromedial thalamic nucleus caudal partipsiVMc4
Lateral posterior thalamic nucleusipsiLP2
Laterodorsal thalamic nucleusipsiLD2
Oval paracentral thalamic nucleusipsiOPC1
Zona incertaipsiZI3
Anterior pretectal nucleusipsiAPT-0.5
Dorsolateral funiculusipsidlft-0.5
Medial forebrain bundleipsimfb-2
Subthalamic nucleusipsiSTh1
Forelimb motor cortexipsiFMCx3
Caudal forelimb motor areaipsiCFMA3
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx3
Ventral lateral geniculate nucleusipsiVLG3
Spinal cordipsiMES-0.5
Cervical segment 1ipsiCS12
Intermediomedial cell column C1ipsiIMMC1-0.5
Cervical segment 2ipsiCS22
Intermediomedial cell column C2ipsiIMMC2-0.5
Cervical segment 3ipsiCS31
Intermediomedial cell column C3ipsiIMMC3-0.5
Cervical segment 4ipsiCS41
Intermediomedial cell column C4ipsiIMMC4-0.5
Cervical segment 5ipsiCS51
Intermediomedial cell column C5ipsiIMMC5-0.5
Cervical segment 6ipsiCS61
Intermediomedial cell column C6ipsiIMMC6-0.5
Cervical segment 7ipsiCS73
Intermediomedial cell column C7ipsiIMMC7-0.5
Cervical segment 8ipsiCS83
Intermediomedial cell column C8ipsiIMMC8-0.5
Thoracal segmentsipsiTSeg-0.5
Thoracal segment 1ipsiT11
Intermediomedial cell column T1ipsiIMMT1-0.5
Thoracal segment 2ipsiT21
Intermediolateral cell column T2ipsiIMLT2-0.5
Intermediomedial cell column T2ipsiIMMT2-0.5
Thoracal segment 3ipsiT31
Intermediolateral cell column T3ipsiIMLT3-0.5
Intermediomedial cell column T3ipsiIMMT3-0.5
Thoracal segment 4ipsiT41
Intermediomedial cell column T4ipsiIMMT4-0.5
Thoracal segment 5ipsiT51
Intermediomedial cell column T5ipsiIMMT5-0.5
Thoracal segment 6ipsiT61
Intermediomedial cell column T6ipsiIMMT6-0.5
Thoracal segment 7ipsiT71
Intermediolateral cell column T7ipsiIMLT7-0.5
Intermediomedial cell column T7ipsiIMMT7-0.5
Thoracal segment 8ipsiT81
Intermediolateral cell column T8ipsiIMLT8-0.5
Intermediomedial cell column T8ipsiIMMT8-0.5
Thoracal segment 9ipsiT91
Intermediolateral cell column T9ipsiIMLT9-0.5
Intermediomedial cell column T9ipsiIMMT9-0.5
Thoracal segment 10ipsiT101
Intermediomedial cell column T10ipsiIMMT10-0.5
Thoracal segment 11ipsiT111
Intermediolateral cell column T11ipsiIMLT11-0.5
Intermediomedial cell column T11ipsiIMMT11-0.5
Thoracal segment 12ipsiT121
Intermediolateral cell column T12ipsiIMLT12-0.5
Intermediomedial cell column T12ipsiIMMT12-0.5
Thoracal segment 13ipsiT131
Intermediolateral cell column T13ipsiIMLT13-0.5
Intermediomedial cell column T13ipsiIMMT13-0.5
Lumbosacral spinal cordipsiLSSC-0.5
Lumbar segment 1ipsiL11
Intermediolateral cell column L1ipsiIMLL1-0.5
Intermediomedial cell column L1ipsiIMML12
Lumbar segment 2ipsiL21.5
Intermediomedial cell column L2ipsiIMML22
Lumbar segment 3ipsiL31.5
Intermediomedial cell column L3ipsiIMML32
Lumbar segment 4ipsiL41
Intermediomedial cell column L4ipsiIMML42
Lumbar segment 5ipsiL51
Intermediomedial cell column L5ipsiIMML52
Lumbar segment 6ipsiL61
Intermediomedial cell column L6ipsiIMML62
Sacral segment 1ipsiSa11
Sacral segment 2ipsiSa21
Sacral segment 3ipsiSa31
Sacral segment 4ipsiSa41
Coccygeal segment 1ipsiCo11
Coccygeal segment 2ipsiCo21
Coccygeal segment 3ipsiCo31
Vitreous humor of eyecontraOrgVHEye-0.5
Orbicularis oculi musclecontraMuscOrbOc-0.5
Femoral bone marrowcontraOrgSkFemM1
Vitreous humor of eyeipsiOrgVHEye3
Orbicularis oculi muscleipsiMuscOrbOc-0.5
Femoral bone marrowipsiOrgSkFemM1

Input from

NameSideAbbr.WeightDetails
Central graycontraCG0.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
CerebellumcontraCERE-0.5
Dorsolateral humpcontraCERcndl0
Interposed cerebellar nucleicontraICN2
Anterior interposed nucleuscontraAIN0
Posterior interposed nucleuscontraCERpin0
Lateral cerebellar nucleuscontraCERL2
Medial cerebellar nucleuscontraMed2
Interstitial cell groupscontraCERIc1
Locus coeruleuscontraLC2
Prepositus nucleuscontraPr1
Mesencephalic reticular formationcontraMRF2
Pontine reticular nucleuscontraPRN0
Pontine reticular nucleus caudal partcontraPNC3
Parabrachial nucleuscontraPB-0.5
Gigantocellular reticular nucleuscontraGi2
Medullary reticular nucleus dorsal partcontraMdDd2
Spinal trigeminal nucleus oral partcontraSp5O-0.5
Superior vestibular nucleuscontraSuVe-0.5
Lateral vestibular nucleuscontraLVe-0.5
Olivary pretectal nucleuscontraOPT-0.5
Medial preoptic nucleuscontraMPO-0.5
Pretectal regioncontraPRT-0.5
Medial terminal nucleus of the accessory optic tractcontraMT1
Dorsal part of the medial terminal nucleus of the accessory optic tractcontraMTD2
Forelimb motor cortexcontraFMCx1
Caudal forelimb motor areacontraCFMA1
Lateral part of the granular cortex of forelimb motor regionscontraLFMCx1
Medial agranular prefrontal cortex caudal partcontracAGm1.5
Internal basilar nucleus C1contraIBC1-0.5
Lateral cervical nucleus C1contraLatCC1-0.5
Lateral spinal nucleus C1contraLSpC1-0.5
Area X C1contraSCL10C1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 6 C1contraSCL6C1-0.5
Spinal cord layer 3 C1contraSCL3C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 1 C1contraSCL1C1-0.5
Spinal cord layer 7 C1contraSCL7C1-0.5
Spinal cord layer 8 C1contraSCL8C1-0.5
Internal basilar nucleus C2contraIBC2-0.5
Lateral cervical nucleus C2contraLatCC2-0.5
Lateral spinal nucleus C2contraLSpC2-0.5
Area X C2contraSCL10C2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 6 C2contraSCL6C2-0.5
Spinal cord layer 3 C2contraSCL3C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 1 C2contraSCL1C2-0.5
Spinal cord layer 7 C2contraSCL7C2-0.5
Spinal cord layer 8 C2contraSCL8C2-0.5
Internal basilar nucleus C3contraIBC3-0.5
Lateral cervical nucleus C3contraLatCC3-0.5
Lateral spinal nucleus C3contraLSpC3-0.5
Area X C3contraSCL10C3-0.5
Spinal cord layer 5 C3contraSCL5C3-0.5
Spinal cord layer 6 C3contraSCL6C3-0.5
Spinal cord layer 3 C3contraSCL3C3-0.5
Spinal cord layer 4 C3contraSCL4C3-0.5
Spinal cord layer 1 C3contraSCL1C3-0.5
Spinal cord layer 7 C3contraSCL7C3-0.5
Spinal cord layer 8 C3contraSCL8C3-0.5
Internal basilar nucleus C4contraIBC4-0.5
Lateral cervical nucleus C4contraLatCC4-0.5
Lateral spinal nucleus C4contraLSpC4-0.5
Area X C4contraSCL10C4-0.5
Spinal cord layer 5 C4contraSCL5C4-0.5
Spinal cord layer 6 C4contraSCL6C4-0.5
Spinal cord layer 3 C4contraSCL3C4-0.5
Spinal cord layer 4 C4contraSCL4C4-0.5
Spinal cord layer 1 C4contraSCL1C4-0.5
Spinal cord layer 7 C4contraSCL7C4-0.5
Spinal cord layer 8 C4contraSCL8C4-0.5
Internal basilar nucleus C5contraIBC5-0.5
Lateral cervical nucleus C5contraLatCC5-0.5
Lateral spinal nucleus C5contraLSpC5-0.5
Area X C5contraSCL10C5-0.5
Spinal cord layer 5 C5contraSCL5C5-0.5
Spinal cord layer 6 C5contraSCL6C5-0.5
Spinal cord layer 3 C5contraSCL3C5-0.5
Spinal cord layer 4 C5contraSCL4C5-0.5
Spinal cord layer 1 C5contraSCL1C5-0.5
Spinal cord layer 7 C5contraSCL7C5-0.5
Spinal cord layer 8 C5contraSCL8C5-0.5
Internal basilar nucleus C6contraIBC6-0.5
Lateral cervical nucleus C6contraLatCC6-0.5
Lateral spinal nucleus C6contraLSpC6-0.5
Area X C6contraSCL10C6-0.5
Spinal cord layer 5 C6contraSCL5C6-0.5
Spinal cord layer 6 C6contraSCL6C6-0.5
Spinal cord layer 3 C6contraSCL3C6-0.5
Spinal cord layer 4 C6contraSCL4C6-0.5
Spinal cord layer 1 C6contraSCL1C6-0.5
Spinal cord layer 7 C6contraSCL7C6-0.5
Spinal cord layer 8 C6contraSCL8C6-0.5
Lateral cervical nucleus C7contraLatCC7-0.5
Lateral spinal nucleus C7contraLSpC7-0.5
Area X C7contraSCL10C7-0.5
Spinal cord layer 5 C7contraSCL5C7-0.5
Spinal cord layer 6 C7contraSCL6C7-0.5
Spinal cord layer 3 C7contraSCL3C7-0.5
Spinal cord layer 4 C7contraSCL4C7-0.5
Spinal cord layer 1 C7contraSCL1C7-0.5
Spinal cord layer 7 C7contraSCL7C7-0.5
Spinal cord layer 8 C7contraSCL8C7-0.5
Lateral cervical nucleus C8contraLatCC8-0.5
Lateral spinal nucleus C8contraLSpC8-0.5
Area X C8contraSCL10C8-0.5
Spinal cord layer 5 C8contraSCL5C8-0.5
Spinal cord layer 6 C8contraSCL6C8-0.5
Spinal cord layer 3 C8contraSCL3C8-0.5
Spinal cord layer 4 C8contraSCL4C8-0.5
Spinal cord layer 1 C8contraSCL1C8-0.5
Spinal cord layer 7 C8contraSCL7C8-0.5
Spinal cord layer 8 C8contraSCL8C8-0.5
Lateral cervical nucleus T1contraLatCT1-0.5
Lateral spinal nucleus T1contraLSpT1-0.5
Area X T1contraSCL10T1-0.5
Spinal cord layer 5 T1contraSCL5T1-0.5
Spinal cord layer 6 T1contraSCL6T1-0.5
Spinal cord layer 3 T1contraSCL3T1-0.5
Spinal cord layer 4 T1contraSCL4T1-0.5
Spinal cord layer 1 T1contraSCL1T1-0.5
Spinal cord layer 7 T1contraSCL7T1-0.5
Spinal cord layer 8 T1contraSCL8T1-0.5
Lateral cervical nucleus T2contraLatCT2-0.5
Lateral spinal nucleus T2contraLSpT2-0.5
Area X T2contraSCL10T2-0.5
Spinal cord layer 5 T2contraSCL5T2-0.5
Spinal cord layer 6 T2contraSCL6T2-0.5
Spinal cord layer 3 T2contraSCL3T2-0.5
Spinal cord layer 4 T2contraSCL4T2-0.5
Spinal cord layer 1 T2contraSCL1T2-0.5
Spinal cord layer 7 T2contraSCL7T2-0.5
Spinal cord layer 8 T2contraSCL8T2-0.5
Lateral cervical nucleus T3contraLatCT3-0.5
Lateral spinal nucleus T3contraLSpT3-0.5
Area X T3contraSCL10T3-0.5
Spinal cord layer 5 T3contraSCL5T3-0.5
Spinal cord layer 6 T3contraSCL6T3-0.5
Spinal cord layer 3 T3contraSCL3T3-0.5
Spinal cord layer 4 T3contraSCL4T3-0.5
Spinal cord layer 1 T3contraSCL1T3-0.5
Spinal cord layer 7 T3contraSCL7T3-0.5
Spinal cord layer 8 T3contraSCL8T3-0.5
Lateral cervical nucleus T4contraLatCT4-0.5
Lateral spinal nucleus T4contraLSpT4-0.5
Area X T4contraSCL10T4-0.5
Spinal cord layer 5 T4contraSCL5T4-0.5
Spinal cord layer 6 T4contraSCL6T4-0.5
Spinal cord layer 3 T4contraSCL3T4-0.5
Spinal cord layer 4 T4contraSCL4T4-0.5
Spinal cord layer 1 T4contraSCL1T4-0.5
Spinal cord layer 7 T4contraSCL7T4-0.5
Spinal cord layer 8 T4contraSCL8T4-0.5
Lateral cervical nucleus T5contraLatCT5-0.5
Lateral spinal nucleus T5contraLSpT5-0.5
Area X T5contraSCL10T5-0.5
Spinal cord layer 5 T5contraSCL5T5-0.5
Spinal cord layer 6 T5contraSCL6T5-0.5
Spinal cord layer 3 T5contraSCL3T5-0.5
Spinal cord layer 4 T5contraSCL4T5-0.5
Spinal cord layer 1 T5contraSCL1T5-0.5
Spinal cord layer 7 T5contraSCL7T5-0.5
Spinal cord layer 8 T5contraSCL8T5-0.5
Lateral cervical nucleus T6contraLatCT6-0.5
Lateral spinal nucleus T6contraLSpT6-0.5
Area X T6contraSCL10T6-0.5
Spinal cord layer 5 T6contraSCL5T6-0.5
Spinal cord layer 6 T6contraSCL6T6-0.5
Spinal cord layer 3 T6contraSCL3T6-0.5
Spinal cord layer 4 T6contraSCL4T6-0.5
Spinal cord layer 1 T6contraSCL1T6-0.5
Spinal cord layer 7 T6contraSCL7T6-0.5
Spinal cord layer 8 T6contraSCL8T6-0.5
Lateral cervical nucleus T7contraLatCT7-0.5
Lateral spinal nucleus T7contraLSpT7-0.5
Area X T7contraSCL10T7-0.5
Spinal cord layer 5 T7contraSCL5T7-0.5
Spinal cord layer 6 T7contraSCL6T7-0.5
Spinal cord layer 3 T7contraSCL3T7-0.5
Spinal cord layer 4 T7contraSCL4T7-0.5
Spinal cord layer 1 T7contraSCL1T7-0.5
Spinal cord layer 7 T7contraSCL7T7-0.5
Spinal cord layer 8 T7contraSCL8T7-0.5
Lateral cervical nucleus T8contraLatCT8-0.5
Lateral spinal nucleus T8contraLSpT8-0.5
Area X T8contraSCL10T8-0.5
Spinal cord layer 5 T8contraSCL5T8-0.5
Spinal cord layer 6 T8contraSCL6T8-0.5
Spinal cord layer 3 T8contraSCL3T8-0.5
Spinal cord layer 4 T8contraSCL4T8-0.5
Spinal cord layer 1 T8contraSCL1T8-0.5
Spinal cord layer 7 T8contraSCL7T8-0.5
Spinal cord layer 8 T8contraSCL8T8-0.5
Lateral cervical nucleus T9contraLatCT9-0.5
Lateral spinal nucleus T9contraLSpT9-0.5
Area X T9contraSCL10T9-0.5
Spinal cord layer 5 T9contraSCL5T9-0.5
Spinal cord layer 6 T9contraSCL6T9-0.5
Spinal cord layer 3 T9contraSCL3T9-0.5
Spinal cord layer 4 T9contraSCL4T9-0.5
Spinal cord layer 1 T9contraSCL1T9-0.5
Spinal cord layer 7 T9contraSCL7T9-0.5
Spinal cord layer 8 T9contraSCL8T9-0.5
Lateral cervical nucleus T10contraLatCT10-0.5
Lateral spinal nucleus T10contraLSpT10-0.5
Area X T10contraSCL10T10-0.5
Spinal cord layer 5 T10contraSCL5T10-0.5
Spinal cord layer 6 T10contraSCL6T10-0.5
Spinal cord layer 3 T10contraSCL3T10-0.5
Spinal cord layer 4 T10contraSCL4T10-0.5
Spinal cord layer 1 T10contraSCL1T10-0.5
Spinal cord layer 7 T10contraSCL7T10-0.5
Spinal cord layer 8 T10contraSCL8T10-0.5
Lateral cervical nucleus T11contraLatCT11-0.5
Lateral spinal nucleus T11contraLSpT11-0.5
Area X T11contraSCL10T11-0.5
Spinal cord layer 5 T11contraSCL5T11-0.5
Spinal cord layer 6 T11contraSCL6T11-0.5
Spinal cord layer 3 T11contraSCL3T11-0.5
Spinal cord layer 4 T11contraSCL4T11-0.5
Spinal cord layer 1 T11contraSCL1T11-0.5
Spinal cord layer 7 T11contraSCL7T11-0.5
Spinal cord layer 8 T11contraSCL8T11-0.5
Lateral cervical nucleus T12contraLatCT12-0.5
Lateral spinal nucleus T12contraLSpT12-0.5
Area X T12contraSCL10T12-0.5
Spinal cord layer 5 T12contraSCL5T12-0.5
Spinal cord layer 6 T12contraSCL6T12-0.5
Spinal cord layer 3 T12contraSCL3T12-0.5
Spinal cord layer 4 T12contraSCL4T12-0.5
Spinal cord layer 1 T12contraSCL1T12-0.5
Spinal cord layer 7 T12contraSCL7T12-0.5
Spinal cord layer 8 T12contraSCL8T12-0.5
Lateral cervical nucleus T13contraLatCT13-0.5
Lateral spinal nucleus T13contraLSpT13-0.5
Area X T13contraSCL10T13-0.5
Spinal cord layer 5 T13contraSCL5T13-0.5
Spinal cord layer 6 T13contraSCL6T13-0.5
Spinal cord layer 3 T13contraSCL3T13-0.5
Spinal cord layer 4 T13contraSCL4T13-0.5
Spinal cord layer 1 T13contraSCL1T13-0.5
Spinal cord layer 7 T13contraSCL7T13-0.5
Spinal cord layer 8 T13contraSCL8T13-0.5
Lateral cervical nucleus L1contraLatCL1-0.5
Lateral spinal nucleus L1contraLSpL1-0.5
Area X L1contraSCL10L1-0.5
Spinal cord layer 5 L1contraSCL5L1-0.5
Spinal cord layer 6 L1contraSCL6L1-0.5
Spinal cord layer 3 L1contraSCL3L1-0.5
Spinal cord layer 4 L1contraSCL4L1-0.5
Spinal cord layer 1 L1contraSCL1L1-0.5
Spinal cord layer 7 L1contraSCL7L1-0.5
Spinal cord layer 8 L1contraSCL8L1-0.5
Lateral cervical nucleus L2contraLatCL2-0.5
Lateral spinal nucleus L2contraLSpL2-0.5
Area X L2contraSCL10L2-0.5
Spinal cord layer 5 L2contraSCL5L2-0.5
Spinal cord layer 6 L2contraSCL6L2-0.5
Spinal cord layer 3 L2contraSCL3L2-0.5
Spinal cord layer 4 L2contraSCL4L2-0.5
Spinal cord layer 1 L2contraSCL1L2-0.5
Spinal cord layer 7 L2contraSCL7L2-0.5
Spinal cord layer 8 L2contraSCL8L2-0.5
Lateral cervical nucleus L3contraLatCL3-0.5
Lateral spinal nucleus L3contraLSpL3-0.5
Area X L3contraSCL10L3-0.5
Spinal cord layer 5 L3contraSCL5L3-0.5
Spinal cord layer 6 L3contraSCL6L3-0.5
Spinal cord layer 3 L3contraSCL3L3-0.5
Spinal cord layer 4 L3contraSCL4L3-0.5
Spinal cord layer 1 L3contraSCL1L3-0.5
Spinal cord layer 7 L3contraSCL7L3-0.5
Spinal cord layer 8 L3contraSCL8L3-0.5
Lateral cervical nucleus L4contraLatCL4-0.5
Lateral spinal nucleus L4contraLSpL4-0.5
Area X L4contraSCL10L4-0.5
Spinal cord layer 5 L4contraSCL5L4-0.5
Spinal cord layer 6 L4contraSCL6L4-0.5
Spinal cord layer 3 L4contraSCL3L4-0.5
Spinal cord layer 4 L4contraSCL4L4-0.5
Spinal cord layer 1 L4contraSCL1L4-0.5
Spinal cord layer 7 L4contraSCL7L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Lateral cervical nucleus L5contraLatCL5-0.5
Lateral spinal nucleus L5contraLSpL5-0.5
Area X L5contraSCL10L5-0.5
Spinal cord layer 5 L5contraSCL5L5-0.5
Spinal cord layer 6 L5contraSCL6L5-0.5
Spinal cord layer 3 L5contraSCL3L5-0.5
Spinal cord layer 4 L5contraSCL4L5-0.5
Spinal cord layer 1 L5contraSCL1L5-0.5
Spinal cord layer 7 L5contraSCL7L5-0.5
Spinal cord layer 8 L5contraSCL8L5-0.5
Lateral cervical nucleus L6contraLatCL6-0.5
Lateral spinal nucleus L6contraLSpL6-0.5
Area X L6contraSCL10L6-0.5
Spinal cord layer 5 L6contraSCL5L6-0.5
Spinal cord layer 6 L6contraSCL6L6-0.5
Spinal cord layer 3 L6contraSCL3L6-0.5
Spinal cord layer 4 L6contraSCL4L6-0.5
Spinal cord layer 1 L6contraSCL1L6-0.5
Spinal cord layer 7 L6contraSCL7L6-0.5
Spinal cord layer 8 L6contraSCL8L6-0.5
Lateral cervical nucleus S1contraLatCS1-0.5
Lateral spinal nucleus S1contraLSpS1-0.5
Area X S1contraSCL10S1-0.5
Spinal cord layer 5 S1contraSCL5S1-0.5
Spinal cord layer 6 S1contraSCL6S1-0.5
Spinal cord layer 3 S1contraSCL3S1-0.5
Spinal cord layer 4 S1contraSCL4S1-0.5
Spinal cord layer 1 S1contraSCL1S1-0.5
Spinal cord layer 7 S1contraSCL7S1-0.5
Spinal cord layer 8 S1contraSCL8S1-0.5
Lateral cervical nucleus S2contraLatCS2-0.5
Lateral spinal nucleus S2contraLSpS2-0.5
Area X S2contraSCL10S2-0.5
Spinal cord layer 5 S2contraSCL5S2-0.5
Spinal cord layer 6 S2contraSCL6S2-0.5
Spinal cord layer 3 S2contraSCL3S2-0.5
Spinal cord layer 4 S2contraSCL4S2-0.5
Spinal cord layer 1 S2contraSCL1S2-0.5
Spinal cord layer 7 S2contraSCL7S2-0.5
Spinal cord layer 8 S2contraSCL8S2-0.5
Lateral cervical nucleus S3contraLatCS3-0.5
Lateral spinal nucleus S3contraLSpS3-0.5
Area X S3contraSCL10S3-0.5
Spinal cord layer 5 S3contraSCL5S3-0.5
Spinal cord layer 6 S3contraSCL6S3-0.5
Spinal cord layer 3 S3contraSCL3S3-0.5
Spinal cord layer 4 S3contraSCL4S3-0.5
Spinal cord layer 1 S3contraSCL1S3-0.5
Spinal cord layer 7 S3contraSCL7S3-0.5
Spinal cord layer 8 S3contraSCL8S3-0.5
Lateral cervical nucleus S4contraLatCS4-0.5
Lateral spinal nucleus S4contraLSpS4-0.5
Area X S4contraSCL10S4-0.5
Spinal cord layer 5 S4contraSCL5S4-0.5
Spinal cord layer 6 S4contraSCL6S4-0.5
Spinal cord layer 3 S4contraSCL3S4-0.5
Spinal cord layer 4 S4contraSCL4S4-0.5
Spinal cord layer 1 S4contraSCL1S4-0.5
Spinal cord layer 7 S4contraSCL7S4-0.5
Spinal cord layer 8 S4contraSCL8S4-0.5
Lateral cervical nucleus Co1contraLatCCo1-0.5
Lateral spinal nucleus Co1contraLSpCo1-0.5
Lateral cervical nucleus Co2contraLatCCo2-0.5
Lateral spinal nucleus Co2contraLSpCo2-0.5
Lateral cervical nucleus Co3contraLatCCo3-0.5
Lateral spinal nucleus Co3contraLSpCo3-0.5
Central grayipsiCG1
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF0
Nucleus of DarkschewitschipsiDk0
Medial accessory oculomotor nucleusipsiMA32
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI0
Dorsolateral periaqueductal grayipsiDLPAG2
Dorsomedial periaqueductal grayipsiDMPAG2
Lateral periaqueductal grayipsiLPAG2
Ventrolateral periaqueductal grayipsiVLPAG2
Prerubral fieldipsiPR0
Red nucleus parvicellular partipsiROC2
Superior colliculus intermediate white layeripsiSAI0
Intermediate gray layer of the superior colliculusipsiInG0
Superior colliculus deep layersipsiSCd-0.5
Subpeduncular tegmental nucleusipsiSPTg0
Substantia nigra compact partipsiSNC0
Substantia nigra compact part dorsal tieripsiSNCD0
Substantia nigra reticular partipsiSNR2
Substantia nigra caudal dorsal partipsiSNCaDo0
Interfascicular nucleusipsiIF0
Parabrachial pigmented nucleusipsiPBP-0.5
Paranigral nucleusipsiPN-0.5
Laterodorsal tegmental nucleusipsiLDTg3
Pedunculopontine tegmental nucleusipsiPPTg0
Visual tegmental relay zoneipsiViTRZo2
Edinger Westphal nucleusipsiEW2
Edinger Westphal nucleus centrally projecting neuronsipsiEWcp2
Edinger Westphal nucleus preganglionic neuronsipsiEWpg2
Interstitial nucleus of CajalipsiInC2
Dorsolateral humpipsiCERcndl0
Anterior interposed nucleusipsiAIN0
Lateral interposed cerebellar nucleusipsiICNL1
Posterior interposed nucleusipsiCERpin0
Parvicellular interposed nucleusipsiICNp0
Lateral cerebellar nucleusipsiCERL-0.5
Lateral cerebellar nucleus parvicellular partipsiLatPC1
Medial cerebellar nucleusipsiMed-0.5
Barringtons nucleusipsiBar0
Locus coeruleusipsiLC2
Dorsomedial tegmental areaipsiDMTg1
Reticulotegmental nucleusipsiRETn0
Prepositus nucleusipsiPr1
Mesencephalic reticular formationipsiMRF2
Deep mesencephalic nucleusipsiDpMe0
Pontine reticular nucleusipsiPRN2
Pontine reticular nucleus oral partipsiPnO3
Oral pontine reticular regionipsiOPRN0
Pontine reticular nucleus caudal partipsiPNC0
Cuneiforme nucleusipsiCnF-0.5
Cuneiforme nucleus dorsal partipsiCnFD-0.5
Lateral parabrachial nucleus ventral partipsiLPBV0
Lateral parabrachial nucleus ventral internal partipsiLPBVi0
Lateral parabrachial nucleus ventral external partipsiLPBVe0
Parabrachial nucleus medialipsiPBnMe0
Medial parabrachial nucleus external partipsiMPBE0
Gigantocellular reticular nucleusipsiGi-0.5
Gigantocellular reticular nucleus ventral partipsiGiV0
Medullary reticular nucleus dorsal partipsiMdDd2
Parvicellular reticular nucleusipsiPCRt0
Nucleus of the trapezoid bodyipsiTz0
Abducens nucleusipsi62
Paraabducens nucleusipsiPa61
Facial nucleusipsi71
Mesencephalic trigeminal nucleusipsiMe5-0.5
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp-0.5
Motor trigeminal nucleusipsiMo5-0.5
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleus oral partipsiSp5O0
Paratrochlear nucleusipsiPa40
Trochlear nucleusipsi40
Spinal vestibular nucleusipsiSpVe3
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe3
Medial vestibular nucleus magnocellular partipsiMVeMC3
Medial vestibular nucleus parvicellular partipsiMVePC3
Lateral vestibular nucleusipsiLVe3
Inferior vestibular nucleusipsiIVN-0.5
Vestibulocerebellar nucleusipsiVeCb0
Nucleus of the solitary tract ventrolateral partipsiSolVL0
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus caudal partipsiDRC0
Rostral linear nucleus of the rapheipsiRLi0
Pontine raphe nucleusipsiPnR0
Raphe interpositus nucleusipsiRIP0
Raphe obscurus nucleusipsiROb0
Ventral portion of the raphe nucleiipsiRANV0
Ventrolateral raphe nucleusipsiRANVL0
Cuneate nucleusipsiCu0
Olivary pretectal nucleusipsiOPT-0.5
Dorsal paragigantocellular nucleusipsiDPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi0
Caudal part of the paragigantocellular reticular nucleusipsiCPGi3
Nucleus of the horizontal limb of the diagonal bandipsiHDB0
Nucleus of the vertical limb of the diagonal bandipsiVDB0
Substantia innominata basal partipsiSIB2
Substantia innominata dorsal partipsiSID0
Substantia innominata ventral partipsiSIV0
Lateral preoptic areaipsiLPO0
Medial preoptic areaipsiMPA0
Medial preoptic area central partipsiMPAce1
Medial preoptic area lateral partipsiMPAL1
Medial preoptic area medial partipsiMPAm1
Anterodorsal preoptic nucleusipsiADP0
Medial preoptic nucleusipsiMPO2
Medial preoptic nucleus lateral partipsiMPOL0
Ventromedial preoptic nucleusipsiVMPO0
Ventral tuberomammillary nucleusipsiVTM0
Vascular organ of the lamina terminalisipsiVOLT0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area tuberal subfornical region [Preoptic anterior region]ipsiLHAsft0
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area anterior partipsiLHAa3
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Lateral hypothalamic area perifornical partipsiPFx2
Lateral hypothalamic area magnocellular partipsiLHmag0
Striohypothalamic nucleusipsiStHy0
Dorsal hypothalamic areaipsiDA0
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleusipsiPH0
Ventromedial hypothalamic nucleus central partipsiVMHC0
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM0
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL0
Arcuate nucleus medial partipsiArcM3
Paraventricular hypothalamic nucleus magnocellular lateral partipsiPaMagL0
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD0
Paraventricular nucleus medial parvocellular partipsiPaMep0
Paraventricular hypothalamic nucleus parvocellular division ventral partipsiPavPoV0
Paraventricular nucleus posterior partipsiPaPos0
Posterior periventricular nucleusipsiPeP0
Incerto hypothalamic areaipsiicHYPO-0.5
Lateral mammillary nucleusipsiLM0
Medial mammillary nucleusipsiMMn3
Medial mammillary nucleus lateral partipsiML0
Premammillary nucleus ventral partipsiPMV0
Perifornical nucleusipsiPeF1
Retrochiasmatic area lateral partipsiRChL0
Supraoculomotor capipsiSu3C2
Parafascicular thalamic nucleusipsiPF0
Suprageniculate thalamic nucleusipsiSG0
Paraventricular thalamic nucleus posterior partipsiPVP0
Subfornical organipsiSFO0
Subparafascicular thalamic nucleusipsiSPF0
Zona incertaipsiZI2
Zona incerta caudal partipsiZIC0
Zona incerta dorsal partipsiZID0
Zona incerta rostral partipsiZIR3
Zona incerta ventral partipsiZIV1
Tuber cinereum areaipsiTC0
Lateral habenular nucleus lateral partipsiLHbL0
Lateral habenular nucleus medial partipsiLHbM3
Medial habenular nucleusipsiMHb1
Medial pretectal nucleusipsiMPT0
Medial terminal nucleus of the accessory optic tractipsiMT1
Ventral part of the medial terminal nucleus of the accessory optic tractipsiMTV0
Dorsal part of the medial terminal nucleus of the accessory optic tractipsiMTD2
Anterior basolateral nucleusipsiBLA0
Anterior basomedial nucleusipsiBMA0
Ventrolateral part of the lateral nucleusipsiLaVL3
Interstitial nucleus of the stria terminalis medial partipsiBSTisM0
Interstitial nucleus of the stria terminalis posterointermedial partipsiBSTisPim0
Interstitial nucleus of the stria terminalis medial ventral partipsiBSTisMV0
Interstitial nucleus of the stria terminalis anterior medial partipsiBSTisAM1
Central amygdaloid nucleusipsiCe0
Capsule like area surrounding central amygdaloid nucleusipsiCec0
Central division of sublenticular extended amygdalaipsiSLEAc0
Anterior amygdaloid area dorsal partipsiAAD0
Anterior amygdaloid area ventral partipsiAAV0
ClaustrumipsiCl1
Medial globus pallidusipsiMGP0
Ventral pallidumipsiVP0
Subthalamic nucleusipsiSTh0
Parasubthalamic nucleusipsiPSTh0
Limbic regionsipsiLR-0.5
Cingulate cortexipsiCg1
Infralimbic cortexipsiIL3
Frontal cortex area 2ipsiFr22
Frontal cortex area 3ipsiFr30
Agranular insular cortexipsiAI0
Agranular insular cortex dorsal partipsiAID0
Agranular insular cortex ventral partipsiAIV0
Prefrontal cortexipsiPFC0
Motoric regionsipsiM3
Lateral prefrontal cortexipsilPFC3
Lateral agranular prefrontal cortexipsiAGl1
Forelimb motor cortexipsiFMCx3
Caudal forelimb motor areaipsiCFMA3
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx3
Medial agranular prefrontal cortexipsiAGm2
Medial agranular prefrontal cortex caudal partipsicAGm1.5
Medial agranular prefrontal cortex rostral partipsirAGm0
Primary somatosensory cortexipsiS10
Dorsolateral orbital cortexipsiDLO0
Lateral orbital cortexipsiLO1
Nucleus of the posterior commissureipsiPCom0
Precommissural nucleusipsiPrC0
Dorsal geniculate nucleus lateral partipsiDLGl0
Medial geniculate nucleusipsiMG0
Ventral geniculate nucleus lateral partipsiVGL0
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus ventral partipsiLSV2
Spinal cordipsiMES0
Spinal cord layer 1 C1ipsiSCL1C1-0.5
Spinal cord layer 1 C2ipsiSCL1C2-0.5
Spinal cord layer 1 C3ipsiSCL1C3-0.5
Spinal cord layer 1 C4ipsiSCL1C4-0.5
Spinal cord layer 1 C5ipsiSCL1C5-0.5
Spinal cord layer 1 C6ipsiSCL1C6-0.5
Spinal cord layer 1 C7ipsiSCL1C7-0.5
Spinal cord layer 1 C8ipsiSCL1C8-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Spinal cord layer 1 T2ipsiSCL1T2-0.5
Spinal cord layer 1 T3ipsiSCL1T3-0.5
Spinal cord layer 1 T4ipsiSCL1T4-0.5
Spinal cord layer 1 T5ipsiSCL1T5-0.5
Spinal cord layer 1 T6ipsiSCL1T6-0.5
Spinal cord layer 1 T7ipsiSCL1T7-0.5
Spinal cord layer 1 T8ipsiSCL1T8-0.5
Spinal cord layer 1 T9ipsiSCL1T9-0.5
Spinal cord layer 1 T10ipsiSCL1T10-0.5
Spinal cord layer 1 T11ipsiSCL1T11-0.5
Spinal cord layer 1 T12ipsiSCL1T12-0.5
Spinal cord layer 1 T13ipsiSCL1T13-0.5
Spinal cord layer 1 L1ipsiSCL1L1-0.5
Spinal cord layer 1 L2ipsiSCL1L2-0.5
Dorsal horn L3ipsiDHL3-0.5
Spinal cord layer 1 L3ipsiSCL1L3-0.5
Ventral horn L3ipsiVHL3-0.5
Dorsal horn L4ipsiDHL4-0.5
Spinal cord layer 1 L4ipsiSCL1L4-0.5
Ventral horn L4ipsiVHL4-0.5
Dorsal horn L5ipsiDHL5-0.5
Spinal cord layer 1 L5ipsiSCL1L5-0.5
Ventral horn L5ipsiVHL5-0.5
Dorsal horn L6ipsiDHL6-0.5
Spinal cord layer 1 L6ipsiSCL1L6-0.5
Ventral horn L6ipsiVHL6-0.5
Dorsal horn S1ipsiDHS1-0.5
Spinal cord layer 1 S1ipsiSCL1S1-0.5
Ventral horn S1ipsiVHSa1-0.5
Dorsal horn S2ipsiDHS2-0.5
Spinal cord layer 1 S2ipsiSCL1S2-0.5
Ventral horn S2ipsiVHSa2-0.5
Spinal cord layer 1 S3ipsiSCL1S3-0.5
Spinal cord layer 1 S4ipsiSCL1S4-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications