University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Ventral funiculus left


Abbreviation
vf
Color       
Superior regionsMain spinal bundle

SynonymsAbbr.Language
Ventral funiculusvfEng

Output to

NameSideAbbr.WeightDetails
Raphe obscurus nucleusipsiROb-2
Forelimb motor cortexipsiFMCx-2
Caudal forelimb motor areaipsiCFMA-2
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx-2
Median nerveipsimen1
Ulnar nerveipsiuln1

Input from

NameSideAbbr.WeightDetails
Pedunculopontine tegmental nucleusipsiPPTg-2
Interstitial nucleus of CajalipsiInC-2
A5 noradrenaline cellsipsiA51
A7 noradrenaline cellsipsiA73
Locus coeruleusipsiLC3
Locus coeruleus ventral partipsiLCv-2
Paramedian reticular nucleusipsiPMn-2
Deep mesencephalic nucleus medial partipsiDpMeM-2
Pontine reticular nucleus oral partipsiPnO-2
Pontine reticular nucleus caudal partipsiPNC-2
Parabrachial nucleusipsiPB-2
Koelliker Fuse nucleusipsiKF-2
Lateral edge of the central lateral parabrachial nucleusipsiPBCeLe-2
Parabrachial nucleus external divison lateral partipsiPBeDL-2
Medial parabrachial nucleus external partipsiMPBE-2
Gigantocellular reticular nucleusipsiGi-2
Gigantocellular reticular nucleus alpha partipsiGiA-2
Gigantocellular reticular nucleus ventral partipsiGiV-2
Medullary reticular nucleus ventral partipsiMdV-2
Ambiguus nucleusipsiAmb-2
Principal sensory trigeminal nucleus dorsal partipsiPr5D-2
Spinal vestibular nucleusipsiSpVe-2
Raphe obscurus nucleusipsiROb-2
Raphe obscurus nucleus caudal partipsiRObc-2
Nucleus interfascicularis hypoglossiipsiNIFH-2
Paragigantocellular reticular nucleusipsiPGi-2
Ventral medulla oblongataipsiVMeO-2
Lateral hypothalamic areaipsiLH-2
Paraventricular hypothalamic nucleusipsiPa-2
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-2
Paraventricular nucleus dorsal partipsiPaDo-2
Zona incertaipsiZI-2
Somatomotoric regionsipsiSMR-2
Forelimb motor cortexipsiFMCx-2
Caudal forelimb motor areaipsiCFMA-2
Lateral part of the granular cortex of forelimb motor regionsipsiLFMCx-2
Primary somatosensory cortexipsiS1-2
Thoracal segment 11ipsiT11-2
Thoracal segment 12ipsiT12-2
Thoracal segment 13ipsiT13-2
Spinal cord layer 7 T13ipsiSCL7T13-2
Lumbar segment 1ipsiL1-2
Intermediomedial cell column L1ipsiIMML1-2
Spinal cord layer 5 L1ipsiSCL5L1-2
Spinal cord layer 7 L1ipsiSCL7L1-2
Spinal cord layer 8 L1ipsiSCL8L1-2
Lumbar segment 2ipsiL2-2
Intermediomedial cell column L2ipsiIMML2-2
Spinal cord layer 5 L2ipsiSCL5L2-2
Spinal cord layer 8 L2ipsiSCL8L2-2
Intermediomedial cell column L3ipsiIMML3-2
Spinal cord layer 5 L3ipsiSCL5L3-2
Spinal cord layer 8 L3ipsiSCL8L3-2
Intermediomedial cell column L4ipsiIMML4-2
Spinal cord layer 5 L4ipsiSCL5L4-2
Spinal cord layer 8 L4ipsiSCL8L4-2
Intermediomedial cell column L5ipsiIMML5-2
Spinal cord layer 5 L5ipsiSCL5L5-2
Spinal cord layer 8 L5ipsiSCL8L5-2
Intermediomedial cell column L6ipsiIMML6-2
Spinal cord layer 5 L6ipsiSCL5L6-2
Spinal cord layer 8 L6ipsiSCL8L6-2
Interstitial nucleus of CajalcontraInC-2
A5 noradrenaline cellscontraA51
A7 noradrenaline cellscontraA73
Locus coeruleuscontraLC1
Gigantocellular reticular nucleuscontraGi-2
Gigantocellular reticular nucleus ventral partcontraGiV-2
Ambiguus nucleuscontraAmb-2
Spinal vestibular nucleuscontraSpVe-2
Raphe obscurus nucleuscontraROb-2
Paragigantocellular reticular nucleuscontraPGi-2
Rostral ventral respiratory groupcontraRVRG-2
Forelimb motor cortexcontraFMCx-0.5
Spinal cord layer 5 C1contraSCL5C1-2
Spinal cord layer 6 C1contraSCL6C1-2
Spinal cord layer 4 C1contraSCL4C1-2
Spinal cord layer 7 C1contraSCL7C1-2
Spinal cord layer 8 C1contraSCL8C1-2
Spinal cord layer 9 C1contraSCL9C1-2
Cervical segment 2contraCS2-2
Spinal cord layer 5 C2contraSCL5C2-2
Spinal cord layer 6 C2contraSCL6C2-2
Spinal cord layer 4 C2contraSCL4C2-2
Spinal cord layer 7 C2contraSCL7C2-2
Spinal cord layer 8 C2contraSCL8C2-2
Spinal cord layer 9 C2contraSCL9C2-2
Cervical segment 3contraCS3-2
Spinal cord layer 5 C3contraSCL5C3-2
Spinal cord layer 6 C3contraSCL6C3-2
Spinal cord layer 4 C3contraSCL4C3-2
Spinal cord layer 7 C3contraSCL7C3-2
Spinal cord layer 8 C3contraSCL8C3-2
Spinal cord layer 9 C3contraSCL9C3-2
Spinal cord layer 5 C4contraSCL5C4-2
Spinal cord layer 6 C4contraSCL6C4-2
Spinal cord layer 4 C4contraSCL4C4-2
Spinal cord layer 7 C4contraSCL7C4-2
Spinal cord layer 8 C4contraSCL8C4-2
Spinal cord layer 9 C4contraSCL9C4-2
Spinal cord layer 7 T13contraSCL7T13-2
Intermediomedial cell column L1contraIMML1-2
Spinal cord layer 7 L1contraSCL7L1-2
Spinal cord layer 8 L1contraSCL8L1-2
Intermediomedial cell column L2contraIMML2-2
Spinal cord layer 8 L2contraSCL8L2-2
Intermediomedial cell column L3contraIMML3-2
Spinal cord layer 8 L3contraSCL8L3-2
Intermediomedial cell column L4contraIMML4-2
Spinal cord layer 8 L4contraSCL8L4-2
Intermediomedial cell column L5contraIMML5-2
Spinal cord layer 8 L5contraSCL8L5-2
Intermediomedial cell column L6contraIMML6-2
Spinal cord layer 8 L6contraSCL8L6-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications