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Rat connectome



Primary visual cortex binocular area left


Abbreviation
V1B
Color       
Superior regionsVisual association cortex

SynonymsAbbr.Language
Primary visual cortex binocular areaV1BEng
 Oc1B 
Occipital cortex area 1 binocular part  

SubregionsSide
Primary visual cortex binocular area layersleft

Output to

NameSideAbbr.WeightDetails
Superior colliculusipsiSC2
Pontine nuclei rostrolateral partipsiBPNrL-0.5
Dorsal endopiriform nucleusipsiDEn0
Ventral endopiriform nucleusipsiVEn0
Dorsal tenia tectaipsiDTT0
Ventral tenia tectaipsiVTT0
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Anterior basomedial nucleusipsiBMA0
Posterior basomedial nucleusipsiBMP0
Lateral amygdaloid nucleusipsiLA0
Amygdalopiriform transition areaipsiAPir0
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp0
Posterolateral cortical nucleusipsiPLCo0
Nucleus of the lateral olfactory tractipsiLOT0
Posteromedial cortical nucleusipsiPMCo0
ClaustrumipsiCl1
Dentate gyrusipsiDG0
Field CA1 of hippocampus dorsalipsiCA1d0
Field CA1 of hippocampus ventral partipsiCA1v0
Field CA2 of hippocampusipsiCA20
Field CA3 of hippocampusipsiCA30
Subiculum dorsal partipsiSd0
Subiculum ventral partipsiSv0
Indusium griseumipsiIG0
PresubiculumipsiPrS-0.5
ParasubiculumipsiPaS0
PostsubiculumipsiPost1.5
Lateral entorhinal cortexipsiLEnt0
Medial entorhinal cortex dorsal partipsiMEntD0
Piriform cortexipsiPir1.5
Postpiriform transition areaipsiTR0
Retrosplenial dorsalipsiRSd2
Retrosplenial ventral partipsiRSPv1.5
Retrosplenial ventral aipsiRSv-a0
Retrosplenial area ventral part zone b/cipsiRSPv-bc0
Retrosplenial agranular cortexipsiRSA2
Dorsal anterior cingulate cortexipsiDACC1.5
Ventral anterior cingulate cortexipsiVACC1.5
Prelimbic cortexipsiPrL0
Infralimbic cortexipsiIL0
Parietal cortex posterior areaipsiParP3
Temporal cortexipsiTE2
Auditory regionsipsiAU3
Primary auditory cortexipsiAu12.5
Ventral auditory areasipsiAUDv2
Agranular insular cortex dorsal partipsiAID0
Agranular insular cortex posterior partipsiAIP0
Agranular insular cortex ventral partipsiAIV0
Gustatory dysgranular insular cortexipsiDIg0
Granular insular cortexipsiGI0
Perirhinal cortexipsiA350.5
Ectorhinal cortexipsiA363
Motoric regionsipsiM0
Lateral agranular prefrontal cortexipsiAGl2
Medial agranular prefrontal cortexipsiAGm2.5
Primary somatosensory cortexipsiS12
Secondary somatosensory cortexipsiS20
Primary visual cortexipsiV13
Secondary visual cortex lateral areaipsiV2L0
Intermediolateral cortical visual areaipsiVISli3
Laterolateral cortical visual areaipsiVISll3
Mediolateral cortical visual areaipsiVISlm4
Posterolateral cortical visual areaipsiVISpl3
Rostrolateral cortical visual areaipsiVISrl2
Anteromedial cortical visual areaipsiVISam4
Lateral orbital cortexipsiLO1.5
Ventral orbital cortexipsiVO1.5
Ventrolateral orbital areaipsiVLO1.5
Accessory olfactory bulbipsiAOB0
Olfactory bulb A16ipsiMOB0
Anterior olfactory nucleusipsiAON0

Input from

NameSideAbbr.WeightDetails
Superior colliculusipsiSC2
Dorsal endopiriform nucleusipsiDEn0
Ventral endopiriform nucleusipsiVEn0
Dorsal tenia tectaipsiDTT0
Ventral tenia tectaipsiVTT0
Retina ganglion cell layeripsiRETgcL-0.5
Retina inner nuclear layeripsiRETinL-0.5
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Anterior basomedial nucleusipsiBMA0
Posterior basomedial nucleusipsiBMP0
Lateral amygdaloid nucleusipsiLA0.5
Amygdalopiriform transition areaipsiAPir0
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp0
Posterolateral cortical nucleusipsiPLCo0
Nucleus of the lateral olfactory tractipsiLOT0
Posteromedial cortical nucleusipsiPMCo0
ClaustrumipsiCl2
Dentate gyrusipsiDG0
Field CA1 of hippocampus dorsalipsiCA1d0
Field CA1 of hippocampus ventral partipsiCA1v0.5
Field CA2 of hippocampusipsiCA20
Field CA3 of hippocampusipsiCA30
Subiculum dorsal partipsiSd0
Subiculum ventral partipsiSv0
Indusium griseumipsiIG0
PresubiculumipsiPrS0
ParasubiculumipsiPaS0
PostsubiculumipsiPost0
Lateral entorhinal cortexipsiLEnt0
Medial entorhinal cortex dorsal partipsiMEntD0.5
Piriform cortexipsiPir0
Postpiriform transition areaipsiTR0
Retrosplenial dorsalipsiRSd2
Retrosplenial ventral partipsiRSPv2
Retrosplenial ventral aipsiRSv-a1.5
Retrosplenial area ventral part zone b/cipsiRSPv-bc0
Retrosplenial agranular cortexipsiRSA2.5
Limbic regionsipsiLR-0.5
Dorsal anterior cingulate cortexipsiDACC1
Ventral anterior cingulate cortexipsiVACC1.5
Prelimbic cortexipsiPrL0
Infralimbic cortexipsiIL0
Parietal cortex posterior areaipsiParP2
Temporal cortexipsiTE2
Auditory regionsipsiAU2
Primary auditory cortexipsiAu11.5
Ventral auditory areasipsiAUDv1
Agranular insular cortex dorsal partipsiAID0
Agranular insular cortex posterior partipsiAIP2.5
Agranular insular cortex ventral partipsiAIV0
Gustatory dysgranular insular cortexipsiDIg0
Granular insular cortexipsiGI1
Perirhinal cortexipsiA352.5
Ectorhinal cortexipsiA363
Motoric regionsipsiM0
Lateral agranular prefrontal cortexipsiAGl0
Medial agranular prefrontal cortexipsiAGm2
Primary somatosensory cortexipsiS11
Secondary somatosensory cortexipsiS21.5
Primary visual cortexipsiV14
Secondary visual cortex lateral areaipsiV2L3
Intermediolateral cortical visual areaipsiVISli3
Laterolateral cortical visual areaipsiVISll0
Mediolateral cortical visual areaipsiVISlm4
Posterolateral cortical visual areaipsiVISpl3
Rostrolateral cortical visual areaipsiVISrl3
Anteromedial cortical visual areaipsiVISam3
Lateral orbital cortexipsiLO0
Ventral orbital cortexipsiVO0
Ventrolateral orbital areaipsiVLO0
Dorsal geniculate nucleus lateral partipsiDLGl3
Accessory olfactory bulbipsiAOB0
Olfactory bulb A16ipsiMOB0
Anterior olfactory nucleusipsiAON0
Retina ganglion cell layercontraRETgcL-0.5
Retina inner nuclear layercontraRETinL-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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