University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Vermis left


Abbreviation
VERM
Color       
Superior regionsCerebellar cortex

SynonymsAbbr.Language
A-zone  
Vermal region of the cerebellar cortex Eng
Vermal cortex Eng
Vermian lobules Eng
VermisVERMEng

SubregionsSide
Anterior lobeleft
Caudal part of cerebellumleft
Caudal part of the vermisleft
Cerebellar lobule 10left
Cerebellar lobule 6left
Lateral margins of vermal lobules 9 and 8left
Lateral vermisleft
Midline cerebellar vermisleft
Portions of central region of vermal lobules 9 and 8left
Portions of the left-hand region of vermal lobules 9 and 8left
Posterior lobe vermisleft
Rostral part of the vermisleft
Vermal cerebellar cortexleft
Medial vermisleft
Purkinje cells of the vermisleft
Molecular layer of vermisleft

Output to

NameSideAbbr.WeightDetails
Cerebellar lobule 9ipsiCERL91
Cerebellar lobule 10ipsiCERL101
Posterior interposed nucleus medial partipsiCERmpin1
Small cell nucleus of the posterior interposed nucleus medial partipsiCERmpinS1
Medial cerebellar nucleusipsiMed3
Medial cerebellar nucleus rostral partipsiMedR-0.5
Cerebellar lobule 9contraCERL91
Cerebellar lobule 10contraCERL101

Input from

NameSideAbbr.WeightDetails
Interposed cerebellar nuclei caudomedial partipsiICNcm1
Interposed cerebellar nuclei medial partipsiICNM-0.5
Medial cerebellar nucleusipsiMed-0.5
Medial cerebellar nucleus lateral partipsiMedL1
Medial cerebellar nucleus middle subdivisionipsiMMCM-0.5
Medial cerebellar nucleus rostromedial partipsiMedrm2
Medial cerebellar nucleus ventral partipsiMedV3
PonsipsiP3
Reticulotegmental nucleus of the ponsipsiRtTg-0.5
Pontine reticular nucleus central partipsiNRTPc3
Pontine reticular nucleus pericentral partipsiNRTPp3
Gigantocellular reticular nucleusipsiGi-0.5
Lateral reticular nucleusipsiLRt3
Lateral reticular nucleus magnocellular partipsiLRtMC3
Caudolateral magnocellular lateral reticular nucleusipsiLRtMCCL3
Caudoventral magnocellular lateral reticular nucleusipsiLRtMCCV3
Area postremaipsiAP-0.5
Intertrigeminal nucleus caudal partipsiI5ca1
Intertrigeminal nucleus medial partipsiI5me1
Intertrigeminal nucleus rostral partipsiI5ro2
Juxtatrigeminal area caudal partipsiJx5ca1
Juxtatrigeminal area medial partipsiJx5me2
Juxtatrigeminal area rostral partipsiJx5ro1
Supratrigeminal nucleus caudal partipsiSUTc2
Principal sensory trigeminal nucleusipsiPr53
Principal sensory trigeminal nucleus caudal partipsiPr5ca3
Principal sensory trigeminal nucleus medial partipsiPr5me2
Principal sensory trigeminal nucleus rostral partipsiPr5ro2
Spinal trigeminal nucleus interpolar partipsiSp5I3
Spinal trigeminal nucleus interpolar part border regionipsiSp5Ib0.5
Spinal trigeminal nucleus interpolar part dorsal partipsiSp5ID2
Spinal trigeminal nucleus interpolar part dorsolateralipsiSp5IdL0.5
Spinal trigeminal nucleus interpolar part dorsomedial partipsiSp5IDM0.5
Spinal trigeminal nucleus interpolar part intermediate partipsiSp5Iim2
Spinal trigeminal nucleus interpolar part rostralipsiSp5Ir2
Spinal trigeminal nucleus interpolar part rostrocaudalipsiSp5Irc2
Spinal trigeminal nucleus interpolar part ventrolateral magnocellularipsiSp5Imc3
Spinal trigeminal nucleus interpolar part ventrolateral parvocellularipsiSp5IvL2
Spinal trigeminal nucleus oral partipsiSp5O-0.5
Trigeminal subnucleus caudalisipsi5SSC-0.5
Trigemino angular nucleus caudal partipsiTac2
Vestibular nucleiipsiVnc-0.5
Cuneate nucleus basal partipsiCuB2
Cuneate nucleus rostral partipsiCuRo2
Cuneate nucleus rostral halfipsiCuRoh-0.5
Inferior oliveipsiIO-0.5
Inferior olive cap of Kooy of the medial nucleusipsiIOK-0.5
Inferior olive dorsal nucleus rostral partipsiIODR0.5
Inferior olive medial nucleus caudal partipsiIOMc-0.5
Inferior olive medial nucleus caudolateral partipsiIOMcL-0.5
Inferior olive beta subnucleusipsiIOBe-0.5
Cervical segment 1ipsiCS1-0.5
Cervical segment 2ipsiCS22
Cervical segment 3ipsiCS32
Cervical segment 6ipsiCS60.5
Cervical segment 7ipsiCS70.5
Cervical segment 8ipsiCS80.5
Thoracal segment 11ipsiT11-0.5
Thoracal segment 12ipsiT12-0.5
Thoracal segment 13ipsiT13-0.5
Lumbar segment 1ipsiL1-0.5
Lumbar segment 2ipsiL2-0.5
Lumbar segment 3ipsiL3-0.5
Lumbar segment 6ipsiL60.5
Sacral segment 1ipsiSa10.5
Sacral segment 2ipsiSa20.5
Medial cerebellar nucleus middle subdivisioncontraMMCM2
Medial cerebellar nucleus rostromedial partcontraMedrm-0.5
Medial cerebellar nucleus ventral partcontraMedV-0.5
Reticulotegmental nucleus of the ponscontraRtTg-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Lateral reticular nucleuscontraLRt2
Lateral reticular nucleus central partcontraLRtC2
Rostral part of the magnocellular lateral reticular nucleuscontraLRtMCR3
Caudolateral magnocellular lateral reticular nucleuscontraLRtMCCL3
Caudoventral magnocellular lateral reticular nucleuscontraLRtMCCV3
Principal sensory trigeminal nucleuscontraPr53
Principal sensory trigeminal nucleus caudal partcontraPr5ca3
Spinal trigeminal nucleus interpolar part rostralcontraSp5Ir1
Vestibular nucleicontraVnc-0.5
Cuneate nucleuscontraCu-0.5
External cuneate nucleuscontraECu-0.5
Inferior olivecontraIO-0.5
Inferior olive caudal partcontraIOCa-0.5
Inferior olive dorsal nucleuscontraIOD-0.5
Inferior olive dorsal nucleus rostral partcontraIODR1
Inferior olive medial nucleuscontraIOM-0.5
Inferior olive medial nucleus caudal partcontraIOMc-0.5
Inferior olive principal nucleuscontraIOPr-0.5
Cervical segment 6contraCS60.5
Cervical segment 7contraCS70.5
Cervical segment 8contraCS80.5
Thoracal segment 11contraT11-0.5
Thoracal segment 12contraT12-0.5
Thoracal segment 13contraT13-0.5
Lumbar segment 1contraL1-0.5
Lumbar segment 2contraL2-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 6contraL60.5
Sacral segment 1contraSa10.5
Sacral segment 2contraSa20.5
Sacral segment 3contraSa3-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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