University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Neocortex layer 5 left


Abbreviation
NEOCXL5
Color       
Superior regionsNeocortex layers 5-6

SynonymsAbbr.Language
Neocortex layer 5NEOCXL5 
Pyramidal layer of the cortex Eng

SubregionsSide
Neocortex layer 5 pyramidal cellsleft

Output to

NameSideAbbr.WeightDetails
Central tegmental field lateral partipsiTGACL-0.5
Substantia nigra A9ipsiSN3
Ventral tegmental area A10ipsiVTA-0.5
PonsipsiP-0.5
Lateral superior oliveipsiLSO-0.5
Posterior hypothalamic areaipsiPHA4
Zona incertaipsiZI3
Zona incerta rostral partipsiZIR-0.5
Caudate putamenipsiCPu3
Dorsal striatumipsiCPud3
Cervical segmentsipsiCSeg-0.5
Substantia nigra A9contraSN0
Ventral tegmental area A10contraVTA1
Preoptic regioncontraPREO3

Input from

NameSideAbbr.WeightDetails
Globus pallidusipsiGP-0.5
Anterior cingulate cortexcontraACC2
Infralimbic cortexcontraIL2
Frontal association cortexcontraFrA2
Lateral agranular prefrontal cortexcontraAGl2
Medial agranular prefrontal cortexcontraAGm2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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