University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Intermediomedial cell column C2 left


Abbreviation
IMMC2
Color       
Superior regionsCervical segment 2

SynonymsAbbr.Language
Intermediomedial cell column C2IMMC2Eng

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Prerubral fieldipsiPR-3
Lateral reticular nucleusipsiLRt-0.5
Nucleus of the solitary tractipsiSol-0.5
Lateral hypothalamic areaipsiLH1
Medial division of the hypothalamusipsiMdH1
ThalamusipsiT3
Anteromedial thalamic nucleusipsiAM-3
Paracentral thalamic nucleusipsiPC-3
Rhomboid thalamic nucleusipsiRh-3
Submedius thalamic nucleusipsiSub1.5
Reuniens thalamic nucleusipsiRe-3
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventrobasal complexipsiVB-3
Ventrobasal complex anterior partipsiVBa0.5
Ventromedial thalamic nucleusipsiVM-3
Posterior groupipsiPTG-3
Ventral medial nucleus of the thalamusipsiVMT-3
Zona incertaipsiZI-0.5
Ventrolateral periaqueductal graycontraVLPAG-0.5
Lateral hypothalamic areacontraLH1
Medial division of the hypothalamuscontraMdH1
ThalamuscontraT3
Submedius thalamic nucleuscontraSub3
Ventrobasal complex anterior partcontraVBa1
Corpus cavernosumipsiOrgCC1

Input from

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk-0.5
A5 noradrenaline cellsipsiA53
A7 noradrenaline cellsipsiA73
Locus coeruleusipsiLC3
Paramedian reticular nucleusipsiPMn0
Subcoeruleus nucleusipsiSubC3
Mesencephalic trigeminal nucleusipsiMe51
Trigeminal ganglionipsi5Gn3
Mandibular region of the trigeminal ganglion at the level of the entry of the mandibular nerveipsi5GnMaEm3
Caudal area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnCOM3
Rostral area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnROM3
Superficial part of the trigeminal ganglionipsi5GnS3
Spinal vestibular nucleusipsiSpVe-0.5
Superior vestibular nucleusipsiSuVe-0.5
Lateral vestibular nucleusipsiLVe-0.5
Raphe obscurus nucleus ventral partipsiRObV2
Raphe pallidus nucleusipsiRPa2
Nucleus interfascicularis hypoglossiipsiNIFH-0.5
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area posterior partipsiLHAp1
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Perifornical nucleusipsiPeF1
Cingulate cortex area 3 vasoregulatory region layer 3ipsiCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4ipsiCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5ipsiCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6ipsiCg3vrL61
Nucleus of the posterior commissureipsiPCom-0.5
Dorsal root ganglion C2ipsiDRGC22
Dorsal root ganglion C3ipsiDRGC32
Dorsal root ganglion C4ipsiDRGC42
Dorsal root ganglion L2ipsiDRGL22
A5 noradrenaline cellscontraA52
A7 noradrenaline cellscontraA72
Locus coeruleuscontraLC2
Subcoeruleus nucleuscontraSubC2
Mesencephalic trigeminal nucleuscontraMe50.5
Nucleus interfascicularis hypoglossicontraNIFH-0.5
Lateral hypothalamic areacontraLH0.5
Cingulate cortex area 3 vasoregulatory region layer 3contraCg3vrL31
Cingulate cortex area 3 vasoregulatory region layer 4contraCg3vrL41
Cingulate cortex area 3 vasoregulatory region layer 5contraCg3vrL51
Cingulate cortex area 3 vasoregulatory region layer 6contraCg3vrL61
Dorsal root ganglion C2contraDRGC2-0.5
Dorsal root ganglion C3contraDRGC3-0.5
Dorsal root ganglion C4contraDRGC4-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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