University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Cervical enlargement left


Abbreviation
CSegE
Color       
Superior regionsCervical segments

SynonymsAbbr.Language
Brachial enlargement  
Cervical enlargementCSegEEng

SubregionsSide
Lateral spinal nucleus of the cervical enlargementleft
Cervical enlargement dorsal hornleft
Corticospinal tract of the cervical enlargementleft

Output to

NameSideAbbr.WeightDetails
Brachium of the superior colliculusipsibsc-1
Lateral reticular nucleusipsiLRt3
Inferior olive dorsal nucleusipsiIOD3
ThalamusipsiT0.5
Lateral group of the dorsal thalamusipsiLAT-1
Posterior groupipsiPTG-1
Medial geniculate nucleus ventrolateral partipsiMGvL-1
Lumbar segmentsipsiLSeg-0.5
Central graycontraCG-0.5
Lateral periaqueductal graycontraLPAG0.5
Brachium of the inferior colliculuscontrabic-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Substantia nigra A9contraSN-0.5
Reticular formation adjacent to the nucleus ambiguuscontraRFaA-0.5
Mesencephalic reticular formationcontraMRF-0.5
Pontine reticular nucleus oral partcontraPnO-0.5
Pontine reticular nucleus caudal partcontraPNC-0.5
Cuneiforme nucleuscontraCnF-0.5
Parabrachial nucleus medialcontraPBnMe-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Lateral reticular nucleuscontraLRt1
Medullary reticular nucleuscontraMdD0.5
Caudal medullary reticular formationcontraCMdD-0.5
Parvicellular reticular nucleuscontraPCRt-0.5
Spinal trigeminal nucleus oral partcontraSp5O-0.5
Nucleus of the solitary tractcontraSol-0.5
Cuneate nucleuscontraCu-0.5
Inferior olive dorsal nucleuscontraIOD1
Superior olivecontraSuOLi-0.5
HypothalamuscontraHYPO-0.5
Medial hypothalamic groupcontraMHYPOg-0.5
ThalamuscontraT0.5
Lateral group of the dorsal thalamuscontraLAT-0.5
Posterior groupcontraPTG-0.5
Lateral lemniscuscontrall-0.5
Medial geniculate nucleuscontraMG-0.5

Input from

NameSideAbbr.WeightDetails
Red nucleusipsiR-0.5
Border of the red nucleusipsiBoR1
Dorsal aspect of the caudal pole of the red nucleusipsiDRnCa-0.5
Medial aspect of the red nucleus caudal partipsiRnCaM-0.5
Red nucleus ventrally in rostral portionsipsiRnRoV-0.5
Central portion of the red nucleusipsiRCe-0.5
A5 noradrenaline cellsipsiA5-0.5
Locus coeruleusipsiLC-0.5
Koelliker Fuse nucleusipsiKF-0.5
Lateral parabrachial nucleusipsiLPB-0.5
Parabrachial nucleus medialipsiPBnMe-0.5
Subcoeruleus nucleusipsiSubC-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Vestibular nucleiipsiVnc-0.5
Raphe nucleiipsiRAN-0.5
Lateral agranular prefrontal cortexcontraAGl-0.5
Lateral agranular prefrontal cortex layer 5contraAGlL5-0.5
Primary somatosensory cortex forelimb regioncontraS1FL-0.5
Head presentation of the primary somatosensory cortexcontraS1hp-0.5
Secondary somatosensory cortexcontraS2-1
Brachial nerveipsibrach-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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