University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Medial hypothalamic group right


Abbreviation
MHYPOg
Color       
Superior regionsHypothalamus

SynonymsAbbr.Language
Mittlere Gruppe  
Medial hypothalamic groupMHYPOgEng
Medial hypothalamic area Eng
Medial thalamus Eng
Medial hypothalamic zone Eng

SubregionsSide
Dorsal half of the medial hypothalamic groupright

Output to

NameSideAbbr.WeightDetails
A5 noradrenaline cellscontraA51
Inferior salivatory nucleuscontraIS1
Superior salivatory nucleuscontraSuS1
A5 noradrenaline cellsipsiA52
Inferior salivatory nucleusipsiIS2
Superior salivatory nucleusipsiSuS2
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Reuniens thalamic nucleusipsiRe1
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Medial extended amygdalaipsiMEXA2
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa1

Input from

NameSideAbbr.WeightDetails
Lateral spinal nucleuscontraMESLn-0.5
Spinal cord lamina 4contraMESL4-0.5
Prebrachial segmentscontraPSeg-0.5
Cervical enlargementcontraCSegE-0.5
Cervical spinal cord layer 1contraCSegL1-0.5
Cervical spinal cord layer 2contraCSegL20.5
Lumbar segmentscontraLSeg-0.5
Lumbar segments layer 1contraLSegL1-0.5
Lumbar segments layer 2contraLSegL20.5
Central grayipsiCG-1
Peripeduncular areaipsiPPA-1
Dorsal raphe nucleus lateral wingipsiDRlw3
Median raphe nucleusipsiMnR1
Raphe magnus nucleus rostral partipsiRMgR-0.5
Raphe nuclei rostral partipsiRANR2
Ventral portion of the raphe nucleiipsiRANV1
Cuneate nucleusipsiCu2
GracileipsiGra2
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Arcuate nucleusipsiArc-0.5
Suprachiasmatic nucleusipsiSCh-1
Reuniens thalamic nucleus dorsocaudal partipsiRedc3
Lateral subparafascicular thalamic nucleusipsiSPFL-1
Bed nucleus of the stria terminalis supracapsular partipsiBSTS-1
Supracapsular bed nucleus of the stria terminalis lateral partipsiBSTSl-1
Supracapsular bed nucleus of the stria terminalis medial partipsiBSTSm-1
Central amygdaloid nucleusipsiCe4
Central amygdaloid nucleus medial divisionipsiCeM2
Central amygdaloid nucleus ventral partipsiCeV2
Medial globus pallidusipsiMGP-0.5
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa1
Cone like caudal dorsomedial extremity of the accumbens shellipsiAcbShco1
Dorsal striatumipsiCPud-1
Subiculum ventral partipsiSv3
Medial geniculate nucleus dorsal partipsiMGD-1
Lateral spinal nucleusipsiMESLn-0.5
Spinal cord lamina 4ipsiMESL4-0.5
Prebrachial segmentsipsiPSeg-0.5
Cervical spinal cord layer 1ipsiCSegL1-0.5
Cervical spinal cord layer 2ipsiCSegL20.5
Lumbar segments layer 1ipsiLSegL1-0.5
Lumbar segments layer 2ipsiLSegL20.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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