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Rat connectome



Superior colliculus intermediate layers right


Abbreviation
SCi
Color       
Superior regionsSuperior colliculus intermediate and deep layers

SynonymsAbbr.Language
Stratum griseum intermedialeSGI 
Superior colliculus intermediate  
Intermediate layers of the superior colliculus  
Superior colliculus intermediate layersSCiEng
Intermediate gray layer of the superior colliculusInGEng
Mid collicular layer Eng
Intermediate layer of the tectum Eng
Intermediate layers of superior colliculus Eng

SubregionsSide
Intermediate gray layer of the superior colliculusright
Intermediate white layer of the superior colliculusright
Superior colliculus intermediate layers ventral partright
Superior colliculus intermediate sublayersright
Anterior part of superior colliculus intermediate layersright
Rostral two-thirds of the stratum griseum intermediale of the superior colliculusright
Lateral part of the stratum griseum intermediale of the superior colliculusright
Ventromedial margin of the stratum griseum intermediale of the superior colliculusright
Superior colliculus intermediate layers inferior portionright
Central part of the stratum griseum intermediale of the superior colliculusright
Superior colliculus intermediate layer upper partright
Rostral stratum griseum intermediale of the superior colliculusright
Superior colliculus intermediate gray layerright
Middle third of the intermediate layer of the superior colliculusright
Medial region of the superior colliculus intermediate layersright

Output to

NameSideAbbr.WeightDetails
Periaqueductal graycontraPAG0
Intermediate gray layer of the superior colliculuscontraInG0
Superior colliculus medial partcontramSC1
Peripeduncular areacontraPPA1
Ventrolateral tegmental areacontraVLTg1
Pontine graycontraPG2
Dorsomedial tegmental areacontraDMTg0.5
Reticulotegmental nucleuscontraRETn2
Reticular systemcontraRF-0.5
Intermediate reticular nucleuscontraIRt0
Paramedian reticular nucleuscontraPMn0
Pontine reticular nucleus oral partcontraPnO1
Pontine reticular nucleus ventral partcontraPnV1
Ventrolateral pontine reticular formationcontravlPRF0
Pontine reticular nucleus caudal partcontraPNC3
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus alpha partcontraGiA2
Gigantocellular reticular nucleus ventral partcontraGiV0
Lateral reticular nucleuscontraLRt0
Medullary reticular nucleus dorsal partcontraMdDd0
Medullary reticular nucleus ventral partcontraMdV0.5
Parvicellular reticular nucleuscontraPCRt1
Parvicellular reticular nucleus alpha partcontraPCRtA0.5
Subcoeruleus nucleuscontraSubC1
Motor trigeminal nucleuscontraMo50.5
Raphe nucleicontraRAN0
Dorsal paragigantocellular nucleuscontraDPGi0
Lateral paragigantocellular nucleuscontraLPGi1
Supraoptic decussationcontrasox1
Zona incertacontraZI1
Optic tractcontraopt-2
Lateral geniculate complexcontraLG1
Ventral lateral geniculate nucleuscontraVLG1
Cervical segmentscontraCSeg-0.5
Cervical segment 1contraCS13
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 6 C1contraSCL6C1-0.5
Ventral horn C1contraVHC13
Spinal cord layer 7 C1contraSCL7C1-0.5
Spinal cord layer 8 C1contraSCL8C1-0.5
Cervical segment 2contraCS23
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 6 C2contraSCL6C2-0.5
Ventral horn C2contraVHC23
Spinal cord layer 7 C2contraSCL7C2-0.5
Spinal cord layer 8 C2contraSCL8C2-0.5
Cervical segment 3contraCS33
Spinal cord layer 5 C3contraSCL5C3-0.5
Spinal cord layer 6 C3contraSCL6C3-0.5
Spinal cord layer 7 C3contraSCL7C3-0.5
Spinal cord layer 8 C3contraSCL8C3-0.5
Intermediomedial cell column C4contraIMMC4-0.5
Spinal cord layer 5 C4contraSCL5C4-0.5
Spinal cord layer 6 C4contraSCL6C4-0.5
Spinal cord layer 7 C4contraSCL7C4-0.5
Spinal cord layer 8 C4contraSCL8C4-0.5
Intermediomedial cell column C5contraIMMC5-0.5
Spinal cord layer 5 C5contraSCL5C5-0.5
Spinal cord layer 6 C5contraSCL6C5-0.5
Spinal cord layer 7 C5contraSCL7C5-0.5
Spinal cord layer 8 C5contraSCL8C5-0.5
Spinal cord layer 5 C6contraSCL5C6-0.5
Spinal cord layer 6 C6contraSCL6C6-0.5
Spinal cord layer 7 C6contraSCL7C6-0.5
Spinal cord layer 8 C6contraSCL8C6-0.5
Spinal cord layer 5 C7contraSCL5C7-0.5
Spinal cord layer 6 C7contraSCL6C7-0.5
Spinal cord layer 7 C7contraSCL7C7-0.5
Spinal cord layer 8 C7contraSCL8C7-0.5
Spinal cord layer 5 C8contraSCL5C8-0.5
Spinal cord layer 6 C8contraSCL6C8-0.5
Spinal cord layer 7 C8contraSCL7C8-0.5
Spinal cord layer 8 C8contraSCL8C8-0.5
Central gray pons dorsolateral wingipsiCGPdlw3
Medial paralemniscal nucleusipsiMPL1
Periaqueductal grayipsiPAG0
Periaqueductal gray rostrolateral partipsiPAGRL2
Inferior colliculusipsiICOL1
Ventral division of the caudal inferior colliculusipsiICOLCV1
Central nucleus of the inferior colliculusipsiCIC1
Rostrocaudal extent of the inferior colliculusipsiRCeICOL1
Superior colliculusipsiSC1
Superior colliculus superficial layersipsiSCs-0.5
Intermediate gray layer of the superior colliculusipsiInG0
Superior colliculus medial partipsimSC1
Substantia nigra medial partipsiSNM0.5
Peripeduncular areaipsiPPA1
Ventrolateral tegmental areaipsiVLTg2
Lateral ponsipsiLaP-0.5
Lateral pontine nucleusipsiLPn2
Dorsomedial tegmental areaipsiDMTg0.5
Reticulotegmental nucleusipsiRETn2
Reticular systemipsiRF-0.5
Intermediate reticular nucleusipsiIRt2
Paramedian reticular nucleusipsiPMn1
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus ventral partipsiPnV1
Ventrolateral pontine reticular formationipsivlPRF2
Pontine reticular nucleus caudal partipsiPNC3
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA4
Gigantocellular reticular nucleus ventral partipsiGiV2
Lateral reticular nucleusipsiLRt1
Medullary reticular nucleus dorsal partipsiMdDd0
Medullary reticular nucleus ventral partipsiMdV1
Parvicellular reticular nucleusipsiPCRt0
Parvicellular reticular nucleus alpha partipsiPCRtA0
Subcoeruleus nucleusipsiSubC0
Facial nucleusipsi72
Motor trigeminal nucleusipsiMo50.5
Raphe nucleiipsiRAN3
Decussation of the predorsal bundleipsidpd-2
Dorsal paragigantocellular nucleusipsiDPGi0
Lateral paragigantocellular nucleusipsiLPGi1
Predorsal bundleipsipd-2
HypothalamusipsiHYPO-0.5
Lateral hypothalamic area ventral partipsiLHAvp-0.5
Anterior hypothalamic area ventral partipsiAHAve-0.5
Supraoptic decussationipsisox2
Nucleus properipsiSOnP-0.5
Retrochiasmatic areaipsiRCh-0.5
Anterior group of the dorsal thalamusipsiATN2
Ventral part of the lateral geniculate complexipsiLGv1
Central medial thalamic nucleusipsiCM3
Centrolateral thalamic nucleusipsiCL3
Parafascicular thalamic nucleusipsiPF-0.5
Posterior thalamic nuclear groupipsiPo2
Mediodorsal thalamic nucleus medial partipsiMDM3
Reuniens thalamic nucleusipsiRe1
Intralaminar nucleiipsiILN-0.5
Lateral posterior thalamic nucleusipsiLP0.5
Laterodorsal thalamic nucleusipsiLD2
Zona incertaipsiZI3
Zona incerta ventral part lateral partipsiZIVL3
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT3
Tractus tectoreticulospinalisipsittrs-2
Subthalamic nucleusipsiSTh2
Lateral geniculate complexipsiLG2
Ventral lateral geniculate nucleusipsiVLG1
Medial geniculate nucleus medial partipsiMGM3
Cervical segmentsipsiCSeg-0.5
Cervical segment 1ipsiCS13
Cervical segment 2ipsiCS23
Cervical segment 3ipsiCS3-0.5
Submandibular ganglionipsiAutoGsm-0.5
Orbicularis oculi musclecontraMuscOrbOc-0.5
Orbicularis oculi muscleipsiMuscOrbOc-0.5

Input from

NameSideAbbr.WeightDetails
Dorsal nucleus of the lateral lemniscuscontraDLL3
Superior colliculuscontraSC1
Sublayer b of superior colliculus intermediate layerscontraSCiB1
Substantia nigra reticular partcontraSNR1
Ventrolateral tegmental areacontraVLTg1
Laterodorsal tegmental nucleuscontraLDTg-0.5
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN1
Pedunculopontine tegmental nucleuscontraPPTg-0.5
CerebellumcontraCERE-0.5
Dorsolateral humpcontraCERcndl0
Anterior interposed nucleuscontraAIN2
Anterior interposed nucleus lateral partcontraAINL1
Posterior interposed nucleuscontraCERpin2
Posterior interposed nucleus caudal partcontraCERpinC3
Lateral cerebellar nucleuscontraCERL2
Lateral cerebellar nucleus central part ventral partcontraCERLcv3
Lateral cerebellar nucleus ventral partcontraCERLV3
Lateral cerebellar nucleus ventrolateral partcontraCERLVL3
Medial cerebellar nucleuscontraMed0.5
Medial cerebellar nucleus caudal partcontraMedc3
Medial cerebellar nucleus middle subdivisioncontraMMCM3
Pontomesencephalic graycontraPoMG-0.5
Ventrolateral pontine reticular formationcontravlPRF0
Gigantocellular reticular nucleus alpha partcontraGiA-0.5
Principal sensory trigeminal nucleuscontraPr53
Spinal trigeminal nucleuscontraSp5nc1
Spinal trigeminal nucleus interpolar partcontraSp5I3
Trigeminal subnucleus caudaliscontra5SSC1
Dorsal column nucleicontraDCN-0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA1.5
Premammillary nucleus dorsal partcontraPMD1
RetinacontraRET-0.5
Prelimbic cortex rostral partcontraPrLr-0.5
Medial agranular prefrontal cortexcontraAGm0.5
Medial agranular prefrontal cortex layer 5contraAGmL50
Primary somatosensory cortex layer 5contraS1L50
Dorsal root ganglion C1contraDRGC1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 3 C1contraSCL3C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 1 C1contraSCL1C1-0.5
Spinal cord layer 2 C1contraSCL2C1-0.5
Spinal cord layer 7 C1contraSCL7C1-0.5
Spinal cord layer 8 C1contraSCL8C1-0.5
Dorsal root ganglion C2contraDRGC2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 3 C2contraSCL3C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 1 C2contraSCL1C2-0.5
Spinal cord layer 2 C2contraSCL2C2-0.5
Ventral horn C2contraVHC23
Spinal cord layer 7 C2contraSCL7C2-0.5
Spinal cord layer 8 C2contraSCL8C2-0.5
Spinal cord layer 5 C3contraSCL5C3-0.5
Spinal cord layer 3 C3contraSCL3C3-0.5
Spinal cord layer 1 C3contraSCL1C3-0.5
Spinal cord layer 7 C3contraSCL7C3-0.5
Spinal cord layer 8 C3contraSCL8C3-0.5
Spinal cord layer 5 C4contraSCL5C4-0.5
Spinal cord layer 3 C4contraSCL3C4-0.5
Spinal cord layer 1 C4contraSCL1C4-0.5
Spinal cord layer 7 C4contraSCL7C4-0.5
Spinal cord layer 8 C4contraSCL8C4-0.5
Spinal cord layer 5 C5contraSCL5C5-0.5
Spinal cord layer 3 C5contraSCL3C5-0.5
Spinal cord layer 1 C5contraSCL1C5-0.5
Spinal cord layer 7 C5contraSCL7C5-0.5
Spinal cord layer 8 C5contraSCL8C5-0.5
Spinal cord layer 5 C6contraSCL5C6-0.5
Spinal cord layer 3 C6contraSCL3C6-0.5
Spinal cord layer 1 C6contraSCL1C6-0.5
Spinal cord layer 7 C6contraSCL7C6-0.5
Spinal cord layer 8 C6contraSCL8C6-0.5
Spinal cord layer 5 C7contraSCL5C7-0.5
Spinal cord layer 3 C7contraSCL3C7-0.5
Spinal cord layer 1 C7contraSCL1C7-0.5
Spinal cord layer 7 C7contraSCL7C7-0.5
Spinal cord layer 8 C7contraSCL8C7-0.5
Spinal cord layer 5 C8contraSCL5C8-0.5
Spinal cord layer 3 C8contraSCL3C8-0.5
Spinal cord layer 1 C8contraSCL1C8-0.5
Spinal cord layer 7 C8contraSCL7C8-0.5
Spinal cord layer 8 C8contraSCL8C8-0.5
Cervical enlargementcontraCSegE-0.5
Cervical enlargement dorsal horncontraCSegEd-0.5
Spinal cord layer 5 T1contraSCL5T1-0.5
Spinal cord layer 3 T1contraSCL3T1-0.5
Spinal cord layer 1 T1contraSCL1T1-0.5
Spinal cord layer 7 T1contraSCL7T1-0.5
Spinal cord layer 8 T1contraSCL8T1-0.5
Spinal cord layer 5 T2contraSCL5T2-0.5
Spinal cord layer 3 T2contraSCL3T2-0.5
Spinal cord layer 1 T2contraSCL1T2-0.5
Spinal cord layer 7 T2contraSCL7T2-0.5
Spinal cord layer 8 T2contraSCL8T2-0.5
Spinal cord layer 5 T3contraSCL5T3-0.5
Spinal cord layer 3 T3contraSCL3T3-0.5
Spinal cord layer 1 T3contraSCL1T3-0.5
Spinal cord layer 7 T3contraSCL7T3-0.5
Spinal cord layer 8 T3contraSCL8T3-0.5
Spinal cord layer 5 T4contraSCL5T4-0.5
Spinal cord layer 3 T4contraSCL3T4-0.5
Spinal cord layer 1 T4contraSCL1T4-0.5
Spinal cord layer 7 T4contraSCL7T4-0.5
Spinal cord layer 8 T4contraSCL8T4-0.5
Spinal cord layer 5 T5contraSCL5T5-0.5
Spinal cord layer 3 T5contraSCL3T5-0.5
Spinal cord layer 1 T5contraSCL1T5-0.5
Spinal cord layer 7 T5contraSCL7T5-0.5
Spinal cord layer 8 T5contraSCL8T5-0.5
Spinal cord layer 5 T6contraSCL5T6-0.5
Spinal cord layer 3 T6contraSCL3T6-0.5
Spinal cord layer 1 T6contraSCL1T6-0.5
Spinal cord layer 7 T6contraSCL7T6-0.5
Spinal cord layer 8 T6contraSCL8T6-0.5
Spinal cord layer 5 T7contraSCL5T7-0.5
Spinal cord layer 3 T7contraSCL3T7-0.5
Spinal cord layer 1 T7contraSCL1T7-0.5
Spinal cord layer 7 T7contraSCL7T7-0.5
Spinal cord layer 8 T7contraSCL8T7-0.5
Spinal cord layer 5 T8contraSCL5T8-0.5
Spinal cord layer 3 T8contraSCL3T8-0.5
Spinal cord layer 1 T8contraSCL1T8-0.5
Spinal cord layer 7 T8contraSCL7T8-0.5
Spinal cord layer 8 T8contraSCL8T8-0.5
Spinal cord layer 5 T9contraSCL5T9-0.5
Spinal cord layer 3 T9contraSCL3T9-0.5
Spinal cord layer 1 T9contraSCL1T9-0.5
Spinal cord layer 7 T9contraSCL7T9-0.5
Spinal cord layer 8 T9contraSCL8T9-0.5
Spinal cord layer 5 T10contraSCL5T10-0.5
Spinal cord layer 3 T10contraSCL3T10-0.5
Spinal cord layer 1 T10contraSCL1T10-0.5
Spinal cord layer 7 T10contraSCL7T10-0.5
Spinal cord layer 8 T10contraSCL8T10-0.5
Spinal cord layer 5 T11contraSCL5T11-0.5
Spinal cord layer 3 T11contraSCL3T11-0.5
Spinal cord layer 1 T11contraSCL1T11-0.5
Spinal cord layer 7 T11contraSCL7T11-0.5
Spinal cord layer 8 T11contraSCL8T11-0.5
Spinal cord layer 5 T12contraSCL5T12-0.5
Spinal cord layer 3 T12contraSCL3T12-0.5
Spinal cord layer 1 T12contraSCL1T12-0.5
Spinal cord layer 7 T12contraSCL7T12-0.5
Spinal cord layer 8 T12contraSCL8T12-0.5
Spinal cord layer 5 T13contraSCL5T13-0.5
Spinal cord layer 3 T13contraSCL3T13-0.5
Spinal cord layer 1 T13contraSCL1T13-0.5
Spinal cord layer 7 T13contraSCL7T13-0.5
Spinal cord layer 8 T13contraSCL8T13-0.5
Spinal cord layer 5 L1contraSCL5L1-0.5
Spinal cord layer 3 L1contraSCL3L1-0.5
Spinal cord layer 1 L1contraSCL1L1-0.5
Spinal cord layer 7 L1contraSCL7L1-0.5
Spinal cord layer 8 L1contraSCL8L1-0.5
Spinal cord layer 5 L2contraSCL5L2-0.5
Spinal cord layer 3 L2contraSCL3L2-0.5
Spinal cord layer 1 L2contraSCL1L2-0.5
Spinal cord layer 7 L2contraSCL7L2-0.5
Spinal cord layer 8 L2contraSCL8L2-0.5
Spinal cord layer 5 L3contraSCL5L3-0.5
Spinal cord layer 3 L3contraSCL3L3-0.5
Spinal cord layer 1 L3contraSCL1L3-0.5
Spinal cord layer 7 L3contraSCL7L3-0.5
Spinal cord layer 8 L3contraSCL8L3-0.5
Spinal cord layer 5 L4contraSCL5L4-0.5
Spinal cord layer 3 L4contraSCL3L4-0.5
Spinal cord layer 1 L4contraSCL1L4-0.5
Spinal cord layer 7 L4contraSCL7L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Spinal cord layer 5 L5contraSCL5L5-0.5
Spinal cord layer 3 L5contraSCL3L5-0.5
Spinal cord layer 1 L5contraSCL1L5-0.5
Spinal cord layer 7 L5contraSCL7L5-0.5
Spinal cord layer 8 L5contraSCL8L5-0.5
Spinal cord layer 5 L6contraSCL5L6-0.5
Spinal cord layer 3 L6contraSCL3L6-0.5
Spinal cord layer 1 L6contraSCL1L6-0.5
Spinal cord layer 7 L6contraSCL7L6-0.5
Spinal cord layer 8 L6contraSCL8L6-0.5
Spinal cord layer 5 S1contraSCL5S1-0.5
Spinal cord layer 3 S1contraSCL3S1-0.5
Spinal cord layer 1 S1contraSCL1S1-0.5
Spinal cord layer 7 S1contraSCL7S1-0.5
Spinal cord layer 8 S1contraSCL8S1-0.5
Spinal cord layer 5 S2contraSCL5S2-0.5
Spinal cord layer 3 S2contraSCL3S2-0.5
Spinal cord layer 1 S2contraSCL1S2-0.5
Spinal cord layer 7 S2contraSCL7S2-0.5
Spinal cord layer 8 S2contraSCL8S2-0.5
Spinal cord layer 5 S3contraSCL5S3-0.5
Spinal cord layer 3 S3contraSCL3S3-0.5
Spinal cord layer 1 S3contraSCL1S3-0.5
Spinal cord layer 7 S3contraSCL7S3-0.5
Spinal cord layer 8 S3contraSCL8S3-0.5
Spinal cord layer 5 S4contraSCL5S4-0.5
Spinal cord layer 3 S4contraSCL3S4-0.5
Spinal cord layer 1 S4contraSCL1S4-0.5
Spinal cord layer 7 S4contraSCL7S4-0.5
Spinal cord layer 8 S4contraSCL8S4-0.5
Spinal cord layer 5 Co1contraSCL5Co1-0.5
Spinal cord layer 3 Co1contraSCL3Co1-0.5
Spinal cord layer 1 Co1contraSCL1Co1-0.5
Spinal cord layer 7 Co1contraSCL7Co1-0.5
Spinal cord layer 8 Co1contraSCL8Co1-0.5
Spinal cord layer 5 Co2contraSCL5Co2-0.5
Spinal cord layer 3 Co2contraSCL3Co2-0.5
Spinal cord layer 1 Co2contraSCL1Co2-0.5
Spinal cord layer 7 Co2contraSCL7Co2-0.5
Spinal cord layer 8 Co2contraSCL8Co2-0.5
Spinal cord layer 5 Co3contraSCL5Co3-0.5
Spinal cord layer 3 Co3contraSCL3Co3-0.5
Spinal cord layer 1 Co3contraSCL1Co3-0.5
Spinal cord layer 7 Co3contraSCL7Co3-0.5
Spinal cord layer 8 Co3contraSCL8Co3-0.5
Dorsal nucleus of the lateral lemniscusipsiDLL3
Inferior colliculusipsiICOL3
Brachium of the inferior colliculusipsibic-0.5
Substantia nigra A9ipsiSN-0.5
Substantia nigra caudolateral partipsiSNcL2
Substantia nigra lateral partipsiSNL-0.5
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part dorsoventral partipsiSNRdv2
Substantia nigra reticular part mediolateral partipsiSNRmL2
Ventrolateral tegmental areaipsiVLTg2
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg2
Dorsal tegmental nucleus lateral partipsiDLTN2
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Pedunculopontine tegmental nucleus pars compactaipsiPPNC-1
Dorsolateral humpipsiCERcndl0
Anterior interposed nucleusipsiAIN0
Anterior interposed nucleus lateral partipsiAINL0.5
Posterior interposed nucleusipsiCERpin0
Posterior interposed nucleus caudal partipsiCERpinC-0.5
Lateral cerebellar nucleusipsiCERL0
Lateral cerebellar nucleus ventral partipsiCERLV-0.5
Lateral cerebellar nucleus ventrolateral partipsiCERLVL0.5
Medial cerebellar nucleusipsiMed0
Medial cerebellar nucleus caudal partipsiMedc1
Medial cerebellar nucleus middle subdivisionipsiMMCM1
Pontomesencephalic grayipsiPoMG-0.5
Deep mesencephalic nucleusipsiDpMe-0.5
Ventrolateral pontine reticular formationipsivlPRF2
Gigantocellular reticular nucleusipsiGi-0.5
Gigantocellular reticular nucleus alpha partipsiGiA-0.5
Gigantocellular reticular nucleus caudal partipsiGiCa3
Principal sensory trigeminal nucleusipsiPr51.5
Dorsal raphe nucleusipsiDR-0.5
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg0
Raphe obscurus nucleusipsiROb0
Raphe pallidus nucleusipsiRPa0
Superior paraolivary nucleusipsiSPO0.5
Paragigantocellular reticular nucleusipsiPGi1
Ventromedial hypothalamic nucleus anterior partipsiVMHA3
Premammillary nucleus dorsal partipsiPMD2
Dorsal part of the lateral geniculate complexipsiLGd3
Ventral part of the lateral geniculate complexipsiLGv3
Suprageniculate thalamic nucleusipsiSG-0.5
Zona incerta dorsal partipsiZID-0.5
Zona incerta ventral partipsiZIV-0.5
Pretectal regionipsiPRT2
Anterior pretectal nucleusipsiAPT2
RetinaipsiRET3
Lateral terminal nucleus of the accessory optic tractipsiLTeN-0.5
Field CA3 of hippocampusipsiCA33
Retrosplenial cortexipsiRSCx-0.5
Retrosplenial agranular cortexipsiRSA3
Midrostrocaudal part of the retrosplenial dysgranular cortexipsiRSdysmrc3
Limbic regionsipsiLR-0.5
Prelimbic cortex rostral partipsiPrLr-0.5
Temporal association area 2 dorsal partipsiTe2D1.5
Rostral dorsomedial frontal cortexipsiPFCdmr3
Whisker motor cortex subfieldsipsiWMCxS-0.5
Primary motor cortex genital areaipsiM1ge-0.5
Medial prefrontal cortexipsimPFC1
Medial agranular prefrontal cortexipsiAGm3
Medial agranular prefrontal cortex layer 5ipsiAGmL50
Medial agranular prefrontal cortex medial partipsimAGm-0.5
Posteromedial barrel subfieldipsiPMBSF2
Primary somatosensory cortex layer 5ipsiS1L50
Central dysgranular zone between E4 whisker and forelimb barrel field layers 5ipsiS1BFcdysL52
Central dysgranular zone between E4 whisker and forelimb barrel field layers 6ipsiS1BFcdysL62
Posterior dygranular zone between whisker and trunk representation layer 5ipsiS1pdyL52
Posterior dygranular zone between whisker and trunk representation layer 6ipsiS1pdyL62
Lateral extrastriate cortexipsiVISxL1
Far lateral extrastriate cortexipsiVISFL1
Medial extrastriate cortexipsiVISM2
Ventral lateral geniculate nucleusipsiVLG3
Medial geniculate nucleus medial partipsiMGM3
Dorsal horn L3ipsiDHL3-0.5
Ventral horn L3ipsiVHL3-0.5
Dorsal horn L4ipsiDHL4-0.5
Ventral horn L4ipsiVHL4-0.5
Dorsal horn L5ipsiDHL5-0.5
Ventral horn L5ipsiVHL5-0.5
Dorsal horn L6ipsiDHL6-0.5
Ventral horn L6ipsiVHL6-0.5
Dorsal horn S1ipsiDHS1-0.5
Ventral horn S1ipsiVHSa1-0.5
Dorsal horn S2ipsiDHS2-0.5
Ventral horn S2ipsiVHSa2-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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