University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Intermediate zone L1 left


Abbreviation
izVHL1
Color       
Superior regionsVentral horn L1

SynonymsAbbr.Language
Intermediate gray L1  
Intermediate substance L1  
Intermediate zone L1izVHL1Eng
Intermediate gray of the spinal cord  

SubregionsSide
Spinal cord layer 7 L1left
Spinal cord layer 8 L1left

Output to

NameSideAbbr.WeightDetails
Deep cerebellar nucleiipsiDNC1
Reticulotegmental nucleusipsiRETn-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Dorsal column nucleiipsiDCN2
Lateral hypothalamic areaipsiLH1.5
Medial division of the hypothalamusipsiMdH0.5
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Suprachiasmatic nucleusipsiSCh0.5
Supraoptic nucleus [Supraoptic region]ipsiSO0.5
Lateral group of the dorsal thalamusipsiLAT1
Posterior thalamic nuclear groupipsiPo1
Ventral posterolateral thalamic nucleusipsiVPL1
Medial thalamic zoneipsiMTZ1
Ansiform lobule crus 1contraCrus1-0.5
Simple lobulecontraSim-0.5
Paravermal region of anterior lobecontraPVAnL-0.5
Deep cerebellar nucleicontraDNC0.5
Lateral hypothalamic areacontraLH3
Medial division of the hypothalamuscontraMdH0.5
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
ThalamuscontraT-0.5
Lateral group of the dorsal thalamuscontraLAT2
Posterior thalamic nuclear groupcontraPo2
Ventral posterolateral thalamic nucleuscontraVPL2
Medial thalamic zonecontraMTZ2
Lateral funiculuscontralf-2
Thoracal segment 10contraT103
Thoracal segment 12contraT122
Lumbar segment 3contraL34
Lumbar segment 5contraL54
Tibial nervecontratibial-0.5
Adductor caudae dorsalis muscleipsiMuscAdCaDo1
Adductor caudae dorsalis musclecontraMuscAdCaDo1

Input from

NameSideAbbr.WeightDetails
Locus coeruleusipsiLC3
Locus coeruleus caudal partipsiLCca-0.5
Locus coeruleus ventral partipsiLCv-0.5
Reticulotegmental nucleusipsiRETn-0.5
Reticular systemipsiRF3
Paramedian reticular nucleusipsiPMn3
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Raphe obscurus nucleusipsiROb3
Lateral agranular prefrontal cortexipsiAGl0.5
Medial agranular prefrontal cortexipsiAGm0.5
Primary somatosensory cortexipsiS10.5
Locus coeruleuscontraLC2
Reticular systemcontraRF3
Paramedian reticular nucleuscontraPMn3
Raphe obscurus nucleuscontraROb3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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