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Rat connectome



Locus coeruleus ventral part left


Abbreviation
LCv
Color       
Superior regionsLocus coeruleus cell body region

SynonymsAbbr.Language
Locus coeruleus ventral partLCvEng

SubregionsSide
Caudal part of ventral locus coeruleusleft
Extreme ventral part of the locus coeruleusleft
Locus coeruleus ventral compact partleft
Mid ventral locus coeruleusleft
Ventral half of the locus coeruleusleft
Locus coeruleus ventral part multipolar cellsleft

Output to

NameSideAbbr.WeightDetails
Cerebellar cortexipsiCERC1
Posterior lobe of the cerebellumipsiCERCPL3
Nucleus of the solitary tractipsiSol2
Raphe magnus nucleusipsiRMg3
Lateral preoptic areaipsiLPO2
Medial preoptic nucleusipsiMPO1
Dorsomedial hypothalamic nucleusipsiDMHy1
Lateral hypothalamic nucleusipsiLHN1
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM3
Anterior hypothalamic areaipsiAHA1
Ventromedial hypothalamic nucleus lateral partipsiVMHL1
Periventricular hypothalamic nucleusipsiPe1
Supraoptic nucleus [Supraoptic region]ipsiSO3
Nucleus properipsiSOnP3
ThalamusipsiT3
Ventrolateral thalamic nucleusipsiVL2
Ventral posterior thalamic complex medial partipsiVPTm2
Lateral funicleipsilfunc-2
Cerebral cortexipsiCEC3
Dorsal hippocampus dentate gyrusipsiDDG3
Ventral hippocampus dentate gyrusipsiVDG0.5
Field CA1 of hippocampus ventral partipsiCA1v0.5
Field CA3 of hippocampus ventral partipsiCA3v0.5
Ventral hippocampusipsiHIPPv0.5
Fornixipsif3
Entorhinal cortexipsiEnt-1
Piriform cortexipsiPir-1
Cingulate cortex area 1ipsiCg11.5
Prelimbic cortexipsiPrL1.5
Frontal association cortexipsiFrA3
Parietal association cortexipsiPtA0.5
Suprarhinal regionipsiSRR1
Whiskers motor cortexipsiWMCx2
Sensory regionsipsiSR-1
Primary somatosensory cortex barrel fieldipsiS1BF2
Visual regionsipsiVR0.5
Secondary visual cortexipsiV2-1
Medial orbital cortexipsiMO1.5
Spinal cordipsiMES3
Dorsal horn of spinal cordipsiDHMES-0.5
Intermediolateral cell column pars principalisipsiIMLp-0.5
Ventral funiculusipsivf-2
Cervical segment 1ipsiCS1-0.5
Area X C1ipsiSCL10C1-0.5
Spinal cord layer 3 C1ipsiSCL3C11
Spinal cord layer 1 C1ipsiSCL1C11
Spinal cord layer 2 C1ipsiSCL2C11
Ventral horn C1ipsiVHC1-0.5
Intermediate zone C1ipsiizVHC1-0.5
Cervical segment 2ipsiCS2-0.5
Area X C2ipsiSCL10C2-0.5
Spinal cord layer 3 C2ipsiSCL3C21
Spinal cord layer 1 C2ipsiSCL1C21
Spinal cord layer 2 C2ipsiSCL2C21
Ventral horn C2ipsiVHC2-0.5
Intermediate zone C2ipsiizVHC2-0.5
Cervical segment 3ipsiCS3-0.5
Area X C3ipsiSCL10C3-0.5
Spinal cord layer 3 C3ipsiSCL3C31
Spinal cord layer 1 C3ipsiSCL1C31
Spinal cord layer 2 C3ipsiSCL2C31
Ventral horn C3ipsiVHC3-0.5
Intermediate zone C3ipsiizVHC3-0.5
Cervical segment 4ipsiCS4-0.5
Area X C4ipsiSCL10C4-0.5
Spinal cord layer 3 C4ipsiSCL3C41
Spinal cord layer 1 C4ipsiSCL1C41
Spinal cord layer 2 C4ipsiSCL2C41
Ventral horn C4ipsiVHC4-0.5
Intermediate zone C4ipsiizVHC4-0.5
Cervical segment 5ipsiCS5-0.5
Area X C5ipsiSCL10C5-0.5
Spinal cord layer 3 C5ipsiSCL3C51
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Ventral horn C5ipsiVHC5-0.5
Intermediate zone C5ipsiizVHC5-0.5
Cervical segment 6ipsiCS6-0.5
Area X C6ipsiSCL10C6-0.5
Spinal cord layer 3 C6ipsiSCL3C61
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C61
Ventral horn C6ipsiVHC6-0.5
Intermediate zone C6ipsiizVHC6-0.5
Cervical segment 7ipsiCS7-0.5
Area X C7ipsiSCL10C7-0.5
Spinal cord layer 3 C7ipsiSCL3C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C71
Ventral horn C7ipsiVHC7-0.5
Intermediate zone C7ipsiizVHC7-0.5
Cervical segment 8ipsiCS8-0.5
Area X C8ipsiSCL10C8-0.5
Spinal cord layer 3 C8ipsiSCL3C81
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 2 C8ipsiSCL2C81
Ventral horn C8ipsiVHC8-0.5
Intermediate zone C8ipsiizVHC8-0.5
Thoracal segment 1ipsiT13
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 3 T1ipsiSCL3T11
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 2 T1ipsiSCL2T11
Ventral horn T1ipsiVHT1-0.5
Intermediate zone T1ipsiizVHT1-0.5
Thoracal segment 2ipsiT23
Area X T2ipsiSCL10T2-0.5
Spinal cord layer 3 T2ipsiSCL3T21
Spinal cord layer 1 T2ipsiSCL1T21
Spinal cord layer 2 T2ipsiSCL2T21
Ventral horn T2ipsiVHT2-0.5
Intermediate zone T2ipsiizVHT2-0.5
Spinal cord layer 9 T2ipsiSCL9T22
Thoracal segment 3ipsiT33
Area X T3ipsiSCL10T3-0.5
Spinal cord layer 3 T3ipsiSCL3T31
Spinal cord layer 1 T3ipsiSCL1T31
Spinal cord layer 2 T3ipsiSCL2T31
Ventral horn T3ipsiVHT3-0.5
Intermediate zone T3ipsiizVHT3-0.5
Spinal cord layer 9 T3ipsiSCL9T32
Thoracal segment 4ipsiT43
Area X T4ipsiSCL10T4-0.5
Spinal cord layer 3 T4ipsiSCL3T41
Spinal cord layer 1 T4ipsiSCL1T41
Spinal cord layer 2 T4ipsiSCL2T41
Ventral horn T4ipsiVHT4-0.5
Intermediate zone T4ipsiizVHT4-0.5
Area X T5ipsiSCL10T5-0.5
Spinal cord layer 3 T5ipsiSCL3T51
Spinal cord layer 1 T5ipsiSCL1T51
Spinal cord layer 2 T5ipsiSCL2T51
Ventral horn T5ipsiVHT5-0.5
Intermediate zone T5ipsiizVHT5-0.5
Area X T6ipsiSCL10T6-0.5
Dorsal horn T6ipsiDHT63
Spinal cord layer 3 T6ipsiSCL3T61
Spinal cord layer 1 T6ipsiSCL1T61
Spinal cord layer 2 T6ipsiSCL2T61
Ventral horn T6ipsiVHT63
Intermediate zone T6ipsiizVHT6-0.5
Area X T7ipsiSCL10T7-0.5
Spinal cord layer 3 T7ipsiSCL3T71
Spinal cord layer 1 T7ipsiSCL1T71
Spinal cord layer 2 T7ipsiSCL2T71
Ventral horn T7ipsiVHT7-0.5
Intermediate zone T7ipsiizVHT7-0.5
Spinal cord layers T8ipsiSCLT83
Area X T8ipsiSCL10T8-0.5
Spinal cord layer 3 T8ipsiSCL3T81
Spinal cord layer 1 T8ipsiSCL1T81
Spinal cord layer 2 T8ipsiSCL2T81
Ventral horn T8ipsiVHT8-0.5
Intermediate zone T8ipsiizVHT8-0.5
Spinal cord layers T9ipsiSCLT93
Area X T9ipsiSCL10T9-0.5
Spinal cord layer 3 T9ipsiSCL3T91
Spinal cord layer 1 T9ipsiSCL1T91
Spinal cord layer 2 T9ipsiSCL2T91
Ventral horn T9ipsiVHT9-0.5
Intermediate zone T9ipsiizVHT9-0.5
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 3 T10ipsiSCL3T101
Spinal cord layer 1 T10ipsiSCL1T101
Spinal cord layer 2 T10ipsiSCL2T101
Ventral horn T10ipsiVHT10-0.5
Intermediate zone T10ipsiizVHT10-0.5
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 3 T11ipsiSCL3T111
Spinal cord layer 1 T11ipsiSCL1T111
Spinal cord layer 2 T11ipsiSCL2T111
Ventral horn T11ipsiVHT11-0.5
Intermediate zone T11ipsiizVHT11-0.5
Area X T12ipsiSCL10T12-0.5
Spinal cord layer 3 T12ipsiSCL3T121
Spinal cord layer 1 T12ipsiSCL1T121
Spinal cord layer 2 T12ipsiSCL2T121
Ventral horn T12ipsiVHT12-0.5
Intermediate zone T12ipsiizVHT12-0.5
Area X T13ipsiSCL10T13-0.5
Spinal cord layer 3 T13ipsiSCL3T131
Spinal cord layer 1 T13ipsiSCL1T131
Spinal cord layer 2 T13ipsiSCL2T131
Ventral horn T13ipsiVHT13-0.5
Intermediate zone T13ipsiizVHT13-0.5
Lumbosacral spinal cordipsiLSSC-0.5
Lumbar segmentsipsiLSeg-0.5
Lumbar segment 1ipsiL1-0.5
Spinal cord layers L1ipsiSCLL11
Area X L1ipsiSCL10L1-0.5
Spinal cord layer 3 L1ipsiSCL3L11
Spinal cord layer 1 L1ipsiSCL1L11
Spinal cord layer 2 L1ipsiSCL2L11
Ventral horn L1ipsiVHL1-0.5
Intermediate zone L1ipsiizVHL1-0.5
Lumbar segment 2ipsiL2-0.5
Spinal cord layers L2ipsiSCLL21
Area X L2ipsiSCL10L2-0.5
Spinal cord layer 3 L2ipsiSCL3L21
Spinal cord layer 1 L2ipsiSCL1L21
Spinal cord layer 2 L2ipsiSCL2L21
Ventral horn L2ipsiVHL2-0.5
Intermediate zone L2ipsiizVHL2-0.5
Lumbar segment 3ipsiL3-0.5
Spinal cord layers L3ipsiSCLL31
Area X L3ipsiSCL10L3-0.5
Spinal cord layer 3 L3ipsiSCL3L31
Spinal cord layer 1 L3ipsiSCL1L31
Spinal cord layer 2 L3ipsiSCL2L31
Ventral horn L3ipsiVHL3-0.5
Intermediate zone L3ipsiizVHL3-0.5
Lumbar segment 4ipsiL4-0.5
Spinal cord layers L4ipsiSCLL41
Area X L4ipsiSCL10L4-0.5
Dorsal horn L4ipsiDHL4-0.5
Spinal cord layer 3 L4ipsiSCL3L41
Spinal cord layer 1 L4ipsiSCL1L41
Spinal cord layer 2 L4ipsiSCL2L41
Ventral horn L4ipsiVHL4-0.5
Intermediate zone L4ipsiizVHL4-0.5
Lumbar segment 5ipsiL5-0.5
Spinal cord layers L5ipsiSCLL51
Area X L5ipsiSCL10L5-0.5
Dorsal horn L5ipsiDHL5-0.5
Spinal cord layer 3 L5ipsiSCL3L51
Spinal cord layer 1 L5ipsiSCL1L51
Spinal cord layer 2 L5ipsiSCL2L51
Ventral horn L5ipsiVHL5-0.5
Intermediate zone L5ipsiizVHL5-0.5
Lumbar segment 6ipsiL6-0.5
Intermediolateral cell column L6ipsiIMLL6-0.5
Spinal cord layers L6ipsiSCLL61
Area X L6ipsiSCL10L6-0.5
Spinal cord layer 3 L6ipsiSCL3L61
Spinal cord layer 1 L6ipsiSCL1L61
Spinal cord layer 2 L6ipsiSCL2L61
Ventral horn L6ipsiVHL6-0.5
Intermediate zone L6ipsiizVHL6-0.5
Area X S1ipsiSCL10S1-0.5
Spinal cord layer 3 S1ipsiSCL3S11
Spinal cord layer 1 S1ipsiSCL1S11
Spinal cord layer 2 S1ipsiSCL2S11
Ventral horn S1ipsiVHSa1-0.5
Intermediate zone S1ipsiizVHS1-0.5
Area X S2ipsiSCL10S2-0.5
Spinal cord layer 3 S2ipsiSCL3S21
Spinal cord layer 1 S2ipsiSCL1S21
Spinal cord layer 2 S2ipsiSCL2S21
Ventral horn S2ipsiVHSa2-0.5
Intermediate zone S2ipsiizVHS2-0.5
Area X S3ipsiSCL10S3-0.5
Spinal cord layer 3 S3ipsiSCL3S31
Spinal cord layer 1 S3ipsiSCL1S31
Spinal cord layer 2 S3ipsiSCL2S31
Ventral horn S3ipsiVHSa3-0.5
Intermediate zone S3ipsiizVHS3-0.5
Area X S4ipsiSCL10S4-0.5
Spinal cord layer 3 S4ipsiSCL3S41
Spinal cord layer 1 S4ipsiSCL1S41
Spinal cord layer 2 S4ipsiSCL2S41
Ventral horn S4ipsiVHSa4-0.5
Intermediate zone S4ipsiizVHS4-0.5
Area X Co1ipsiSCL10Co1-0.5
Ventral horn Co1ipsiVHCo1-0.5
Intermediate zone Co1ipsiizVHCo1-0.5
Area X Co2ipsiSCL10Co2-0.5
Ventral horn Co2ipsiVHCo2-0.5
Intermediate zone Co2ipsiizVHCo2-0.5
Area X Co3ipsiSCL10Co3-0.5
Ventral horn Co3ipsiVHCo3-0.5
Intermediate zone Co3ipsiizVHCo3-0.5
Medial preoptic nucleuscontraMPO-0.5
Intermediolateral cell column pars principaliscontraIMLp-0.5
Spinal cord layer 3 C1contraSCL3C10.5
Spinal cord layer 1 C1contraSCL1C10.5
Spinal cord layer 2 C1contraSCL2C10.5
Spinal cord layer 3 C2contraSCL3C20.5
Spinal cord layer 1 C2contraSCL1C20.5
Spinal cord layer 2 C2contraSCL2C20.5
Spinal cord layer 3 C3contraSCL3C30.5
Spinal cord layer 1 C3contraSCL1C30.5
Spinal cord layer 2 C3contraSCL2C30.5
Spinal cord layer 3 C4contraSCL3C40.5
Spinal cord layer 1 C4contraSCL1C40.5
Spinal cord layer 2 C4contraSCL2C40.5
Spinal cord layer 3 C5contraSCL3C50.5
Spinal cord layer 1 C5contraSCL1C50.5
Spinal cord layer 2 C5contraSCL2C50.5
Spinal cord layer 3 C6contraSCL3C60.5
Spinal cord layer 1 C6contraSCL1C60.5
Spinal cord layer 2 C6contraSCL2C60.5
Spinal cord layer 3 C7contraSCL3C70.5
Spinal cord layer 1 C7contraSCL1C70.5
Spinal cord layer 2 C7contraSCL2C70.5
Spinal cord layer 3 C8contraSCL3C80.5
Spinal cord layer 1 C8contraSCL1C80.5
Spinal cord layer 2 C8contraSCL2C80.5
Spinal cord layer 3 T1contraSCL3T10.5
Spinal cord layer 1 T1contraSCL1T10.5
Spinal cord layer 2 T1contraSCL2T10.5
Spinal cord layer 3 T2contraSCL3T20.5
Spinal cord layer 1 T2contraSCL1T20.5
Spinal cord layer 2 T2contraSCL2T20.5
Spinal cord layer 9 T2contraSCL9T21
Spinal cord layer 3 T3contraSCL3T30.5
Spinal cord layer 1 T3contraSCL1T30.5
Spinal cord layer 2 T3contraSCL2T30.5
Spinal cord layer 9 T3contraSCL9T31
Spinal cord layer 3 T4contraSCL3T40.5
Spinal cord layer 1 T4contraSCL1T40.5
Spinal cord layer 2 T4contraSCL2T40.5
Spinal cord layer 3 T5contraSCL3T50.5
Spinal cord layer 1 T5contraSCL1T50.5
Spinal cord layer 2 T5contraSCL2T50.5
Spinal cord layer 3 T6contraSCL3T60.5
Spinal cord layer 1 T6contraSCL1T60.5
Spinal cord layer 2 T6contraSCL2T60.5
Spinal cord layer 3 T7contraSCL3T70.5
Spinal cord layer 1 T7contraSCL1T70.5
Spinal cord layer 2 T7contraSCL2T70.5
Spinal cord layer 3 T8contraSCL3T80.5
Spinal cord layer 1 T8contraSCL1T80.5
Spinal cord layer 2 T8contraSCL2T80.5
Spinal cord layer 3 T9contraSCL3T90.5
Spinal cord layer 1 T9contraSCL1T90.5
Spinal cord layer 2 T9contraSCL2T90.5
Spinal cord layer 3 T10contraSCL3T100.5
Spinal cord layer 1 T10contraSCL1T100.5
Spinal cord layer 2 T10contraSCL2T100.5
Spinal cord layer 3 T11contraSCL3T110.5
Spinal cord layer 1 T11contraSCL1T110.5
Spinal cord layer 2 T11contraSCL2T110.5
Spinal cord layer 3 T12contraSCL3T120.5
Spinal cord layer 1 T12contraSCL1T120.5
Spinal cord layer 2 T12contraSCL2T120.5
Spinal cord layer 3 T13contraSCL3T130.5
Spinal cord layer 1 T13contraSCL1T130.5
Spinal cord layer 2 T13contraSCL2T130.5
Spinal cord layers L1contraSCLL10.5
Spinal cord layer 3 L1contraSCL3L10.5
Spinal cord layer 1 L1contraSCL1L10.5
Spinal cord layer 2 L1contraSCL2L10.5
Spinal cord layers L2contraSCLL20.5
Spinal cord layer 3 L2contraSCL3L20.5
Spinal cord layer 1 L2contraSCL1L20.5
Spinal cord layer 2 L2contraSCL2L20.5
Lumbar segment 3contraL3-0.5
Spinal cord layers L3contraSCLL30.5
Spinal cord layer 3 L3contraSCL3L30.5
Spinal cord layer 1 L3contraSCL1L30.5
Spinal cord layer 2 L3contraSCL2L30.5
Lumbar segment 4contraL4-0.5
Spinal cord layers L4contraSCLL40.5
Spinal cord layer 3 L4contraSCL3L40.5
Spinal cord layer 1 L4contraSCL1L40.5
Spinal cord layer 2 L4contraSCL2L40.5
Spinal cord layers L5contraSCLL50.5
Spinal cord layer 3 L5contraSCL3L50.5
Spinal cord layer 1 L5contraSCL1L50.5
Spinal cord layer 2 L5contraSCL2L50.5
Intermediolateral cell column L6contraIMLL6-0.5
Spinal cord layers L6contraSCLL60.5
Spinal cord layer 3 L6contraSCL3L60.5
Spinal cord layer 1 L6contraSCL1L60.5
Spinal cord layer 2 L6contraSCL2L60.5
Spinal cord layer 3 S1contraSCL3S10.5
Spinal cord layer 1 S1contraSCL1S10.5
Spinal cord layer 2 S1contraSCL2S10.5
Spinal cord layer 3 S2contraSCL3S20.5
Spinal cord layer 1 S2contraSCL1S20.5
Spinal cord layer 2 S2contraSCL2S20.5
Spinal cord layer 3 S3contraSCL3S30.5
Spinal cord layer 1 S3contraSCL1S30.5
Spinal cord layer 2 S3contraSCL2S30.5
Spinal cord layer 3 S4contraSCL3S40.5
Spinal cord layer 1 S4contraSCL1S40.5
Spinal cord layer 2 S4contraSCL2S40.5
MyocardiumipsiOrgsCorMyo1
MyocardiumcontraOrgsCorMyo-0.5
Distal colonipsiOrgsColonDi-10
KidneyipsiOrgsKid-0.5
KidneycontraOrgsKid-0.5

Input from

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG1
Raphe magnus nucleusipsiRMg1
Medial preoptic areaipsiMPA1
Medial preoptic nucleusipsiMPO1
Extended ventrolateral preoptic nucleusipsieVLPO3
Medial extended ventrolateral preoptic nucleusipsimeVLPO3
Ventrolateral preoptic nucleus clusteripsiVLPOc3
Ventral tegmental area A10contraVTA-0.5
Raphe magnus nucleuscontraRMg1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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