Department of Anatomy University of Rostock

University of Rostock

Department of Anatomy

Neuroscience Group

Homepage

Staff

neuroVIISAS

Rat connectome

Other connectomes

Neuroimaging

Neurodegeneration

Neuroproteomics

Students

Links

Publications

Rat connectome

Locus coeruleus caudal part left

Abbreviation	LCca
Color
Superior regions	Locus coeruleus cell body region

Synonyms	Abbr.	Language
Locus coeruleus caudal part	LCca	Eng
Caudal level of the locus coeruleus		Eng
Caudal locus coeruleus pars dorsalis		Eng

Subregions	Side
Dorsal division of the caudal locus coeruleus	left
Locus coeruleus caudal part ventral part	left
Small fusiform neurons of the caudal portion of the locus coeruleus	left
Core of the caudal locus coeruleus	left
Locus coeruleus midcaudal part	left

Output to

Name	Side	Abbr.	Weight
Superior colliculus	ipsi	SC	3
Interfascicular nucleus	ipsi	IF	-0.5
Paraflocculus	ipsi	PFl	2
Cerebellar lobule 7	ipsi	CERL7	2
Cerebellar lobule 6	ipsi	CERL6	2
Locus coeruleus rostral part	ipsi	LCRo	-0.5
Principal sensory trigeminal nucleus	ipsi	Pr5	1.5
Cochlear root neurons	ipsi	CORN	3
Dorsal raphe nucleus caudal part	ipsi	DRC	-0.5
Dorsal raphe nucleus median part	ipsi	DRM	1
Lateral wing of rostrocaudal dorsal raphe nucleus	ipsi	DRrcLW	-0.5
Dorsal raphe nucleus ventromedial subdivision	ipsi	DRvme	-0.5
Raphe magnus nucleus	ipsi	RMg	1
Medial part of posterior thalamic nuclear group	ipsi	PoM	2
Ventrobasal complex	ipsi	VB	2
Lateral posterior thalamic nucleus	ipsi	LP	2
Hippocampus	ipsi	HIPP	3
Ventral hippocampus	ipsi	HIPPv	2
Entorhinal cortex	ipsi	Ent	1
Limbic regions	ipsi	LR	1
Anterior cingulate cortex	ipsi	ACC	0
Cingulate cortex area 1	ipsi	Cg1	4
Prelimbic cortex	ipsi	PrL	4
Frontal association cortex	ipsi	FrA	-0.5
Perirhinal cortex	ipsi	A35	1
Somatomotoric regions	ipsi	SMR	-0.5
Medial prefrontal cortex	ipsi	mPFC	3
Primary somatosensory cortex	ipsi	S1	2
Secondary somatosensory cortex	ipsi	S2	2
Visual regions	ipsi	VR	-0.5
Primary visual cortex	ipsi	V1	2
Secondary visual cortex medial area	ipsi	V2M	2
Secondary visual cortex lateral area	ipsi	V2L	2
Anterior medial frontal cortex	ipsi	AMFC	0
Medial orbital cortex	ipsi	MO	4
Dorsal geniculate nucleus lateral part	ipsi	DLGl	2
Ventral lateral geniculate nucleus	ipsi	VLG	2
Area X C1	ipsi	SCL10C1	-0.5
Ventral horn C1	ipsi	VHC1	-0.5
Intermediate zone C1	ipsi	izVHC1	-0.5
Area X C2	ipsi	SCL10C2	-0.5
Ventral horn C2	ipsi	VHC2	-0.5
Intermediate zone C2	ipsi	izVHC2	-0.5
Area X C3	ipsi	SCL10C3	-0.5
Ventral horn C3	ipsi	VHC3	-0.5
Intermediate zone C3	ipsi	izVHC3	-0.5
Area X C4	ipsi	SCL10C4	-0.5
Ventral horn C4	ipsi	VHC4	-0.5
Intermediate zone C4	ipsi	izVHC4	-0.5
Area X C5	ipsi	SCL10C5	-0.5
Ventral horn C5	ipsi	VHC5	-0.5
Intermediate zone C5	ipsi	izVHC5	-0.5
Area X C6	ipsi	SCL10C6	-0.5
Ventral horn C6	ipsi	VHC6	-0.5
Intermediate zone C6	ipsi	izVHC6	-0.5
Area X C7	ipsi	SCL10C7	-0.5
Ventral horn C7	ipsi	VHC7	-0.5
Intermediate zone C7	ipsi	izVHC7	-0.5
Area X C8	ipsi	SCL10C8	-0.5
Ventral horn C8	ipsi	VHC8	-0.5
Intermediate zone C8	ipsi	izVHC8	-0.5
Area X T1	ipsi	SCL10T1	-0.5
Ventral horn T1	ipsi	VHT1	-0.5
Intermediate zone T1	ipsi	izVHT1	-0.5
Area X T2	ipsi	SCL10T2	-0.5
Ventral horn T2	ipsi	VHT2	-0.5
Intermediate zone T2	ipsi	izVHT2	-0.5
Area X T3	ipsi	SCL10T3	-0.5
Ventral horn T3	ipsi	VHT3	-0.5
Intermediate zone T3	ipsi	izVHT3	-0.5
Area X T4	ipsi	SCL10T4	-0.5
Ventral horn T4	ipsi	VHT4	-0.5
Intermediate zone T4	ipsi	izVHT4	-0.5
Area X T5	ipsi	SCL10T5	-0.5
Ventral horn T5	ipsi	VHT5	-0.5
Intermediate zone T5	ipsi	izVHT5	-0.5
Area X T6	ipsi	SCL10T6	-0.5
Ventral horn T6	ipsi	VHT6	-0.5
Intermediate zone T6	ipsi	izVHT6	-0.5
Area X T7	ipsi	SCL10T7	-0.5
Ventral horn T7	ipsi	VHT7	-0.5
Intermediate zone T7	ipsi	izVHT7	-0.5
Area X T8	ipsi	SCL10T8	-0.5
Ventral horn T8	ipsi	VHT8	-0.5
Intermediate zone T8	ipsi	izVHT8	-0.5
Area X T9	ipsi	SCL10T9	-0.5
Ventral horn T9	ipsi	VHT9	-0.5
Intermediate zone T9	ipsi	izVHT9	-0.5
Area X T10	ipsi	SCL10T10	-0.5
Ventral horn T10	ipsi	VHT10	-0.5
Intermediate zone T10	ipsi	izVHT10	-0.5
Area X T11	ipsi	SCL10T11	-0.5
Ventral horn T11	ipsi	VHT11	-0.5
Intermediate zone T11	ipsi	izVHT11	-0.5
Area X T12	ipsi	SCL10T12	-0.5
Ventral horn T12	ipsi	VHT12	-0.5
Intermediate zone T12	ipsi	izVHT12	-0.5
Area X T13	ipsi	SCL10T13	-0.5
Ventral horn T13	ipsi	VHT13	-0.5
Intermediate zone T13	ipsi	izVHT13	-0.5
Area X L1	ipsi	SCL10L1	-0.5
Ventral horn L1	ipsi	VHL1	-0.5
Intermediate zone L1	ipsi	izVHL1	-0.5
Area X L2	ipsi	SCL10L2	-0.5
Ventral horn L2	ipsi	VHL2	-0.5
Intermediate zone L2	ipsi	izVHL2	-0.5
Area X L3	ipsi	SCL10L3	-0.5
Ventral horn L3	ipsi	VHL3	-0.5
Intermediate zone L3	ipsi	izVHL3	-0.5
Area X L4	ipsi	SCL10L4	-0.5
Ventral horn L4	ipsi	VHL4	-0.5
Intermediate zone L4	ipsi	izVHL4	-0.5
Area X L5	ipsi	SCL10L5	-0.5
Ventral horn L5	ipsi	VHL5	-0.5
Intermediate zone L5	ipsi	izVHL5	-0.5
Intermediolateral cell column L6	ipsi	IMLL6	-0.5
Area X L6	ipsi	SCL10L6	-0.5
Ventral horn L6	ipsi	VHL6	-0.5
Intermediate zone L6	ipsi	izVHL6	-0.5
Area X S1	ipsi	SCL10S1	-0.5
Ventral horn S1	ipsi	VHSa1	-0.5
Intermediate zone S1	ipsi	izVHS1	-0.5
Area X S2	ipsi	SCL10S2	-0.5
Ventral horn S2	ipsi	VHSa2	-0.5
Intermediate zone S2	ipsi	izVHS2	-0.5
Area X S3	ipsi	SCL10S3	-0.5
Ventral horn S3	ipsi	VHSa3	-0.5
Intermediate zone S3	ipsi	izVHS3	-0.5
Area X S4	ipsi	SCL10S4	-0.5
Ventral horn S4	ipsi	VHSa4	-0.5
Intermediate zone S4	ipsi	izVHS4	-0.5
Area X Co1	ipsi	SCL10Co1	-0.5
Ventral horn Co1	ipsi	VHCo1	-0.5
Intermediate zone Co1	ipsi	izVHCo1	-0.5
Area X Co2	ipsi	SCL10Co2	-0.5
Ventral horn Co2	ipsi	VHCo2	-0.5
Intermediate zone Co2	ipsi	izVHCo2	-0.5
Area X Co3	ipsi	SCL10Co3	-0.5
Ventral horn Co3	ipsi	VHCo3	-0.5
Intermediate zone Co3	ipsi	izVHCo3	-0.5
Superior colliculus	contra	SC	2
Paraflocculus	contra	PFl	1
Cerebellar lobule 7	contra	CERL7	1
Cerebellar lobule 6	contra	CERL6	1
Principal sensory trigeminal nucleus	contra	Pr5	2
Cochlear root neurons	contra	CORN	1
Medial part of posterior thalamic nuclear group	contra	PoM	1
Ventrobasal complex	contra	VB	1
Lateral posterior thalamic nucleus	contra	LP	1.5
Cingulate cortex area 1	contra	Cg1	2
Prelimbic cortex	contra	PrL	2
Primary somatosensory cortex	contra	S1	0.5
Secondary somatosensory cortex	contra	S2	0.5
Primary visual cortex	contra	V1	1
Secondary visual cortex medial area	contra	V2M	1
Secondary visual cortex lateral area	contra	V2L	1
Medial orbital cortex	contra	MO	2
Dorsal geniculate nucleus lateral part	contra	DLGl	1.5
Ventral lateral geniculate nucleus	contra	VLG	1.5
Intermediolateral cell column L6	contra	IMLL6	-0.5

Input from

Name	Side	Abbr.	Weight
Central gray	ipsi	CG	1
Dorsolateral periaqueductal gray	ipsi	DLPAG	3
Lateral periaqueductal gray	ipsi	LPAG	3
Ventrolateral periaqueductal gray	ipsi	VLPAG	2
Substantia nigra compact part	ipsi	SNC	2
Substantia nigra reticular part	ipsi	SNR	1
Ventral tegmental area A10	ipsi	VTA	0
Barringtons nucleus	ipsi	Bar	1
Ventral dendritic zone of the locus coeruleus	ipsi	LCvd	-1
Dorsomedial tegmental area	ipsi	DMTg	1
Prepositus nucleus	ipsi	Pr	1
Deep mesencephalic nucleus	ipsi	DpMe	1
Pontine reticular nucleus	ipsi	PRN	1
Cuneiforme nucleus	ipsi	CnF	1
Parabrachial nucleus medial	ipsi	PBnMe	-1
Gigantocellular reticular nucleus	ipsi	Gi	1
Subcoeruleus nucleus	ipsi	SubC	1
Superior vestibular nucleus	ipsi	SuVe	1
Dorsal raphe nucleus	ipsi	DR	3
Dorsal raphe nucleus dorsomedial subdivision	ipsi	DRdm	1
Dorsal raphe nucleus lateral wing	ipsi	DRlw	3
Dorsal raphe nucleus medial longitudinal fasciculus subdivision	ipsi	DRmLF	2
Dorsal raphe nucleus ventromedial subdivision caudal part	ipsi	DRvmec	1
Dorsal raphe nucleus ventromedial subdivision rostral part	ipsi	DRvmer	2
Median raphe nucleus	ipsi	MnR	1
Raphe interpositus nucleus	ipsi	RIP	1
Raphe magnus nucleus	ipsi	RMg	1
Raphe obscurus nucleus	ipsi	ROb	1
Raphe pallidus nucleus	ipsi	RPa	1
Dorsal paragigantocellular nucleus	ipsi	DPGi	1
Lateral paragigantocellular nucleus	ipsi	LPGi	1
Diagonal band of Broca	ipsi	DBB	0
Medial tuberal nucleus	ipsi	MTuN	2
Preoptic region	ipsi	PREO	3
Medial preoptic area	ipsi	MPA	3
Lateral preoptic nucleus	ipsi	LPN	3
Ventral part of the median preoptic nucleus	ipsi	MnPOV	2
Dorsal median preoptic nucleus	ipsi	MnPOD	-0.5
Ventrolateral preoptic nucleus	ipsi	VLPO	2
Ventromedial preoptic nucleus	ipsi	VMPO	1
Tuberomammillary nucleus	ipsi	TuM	1
Tuberomammillary nucleus dorsomedial part	ipsi	TBMdm	0.5
Tuberomammillary nucleus ventrolateral part	ipsi	TBMvl	1
Ventral tuberomammillary nucleus	ipsi	VTM	1
Caudal tuberomammillary nucleus	ipsi	TuMC	1
Lateral hypothalamic area	ipsi	LH	3
Lateral hypothalamic area lateral part	ipsi	LHAL	3
Lateral hypothalamic area medial part	ipsi	LHAm	2
Lateral hypothalamic area perifornical part	ipsi	PFx	1
Anterior hypothalamic area	ipsi	AHA	1
Posterior hypothalamic area	ipsi	PHA	2
Periventricular zone	ipsi	PVZ	1
Arcuate nucleus	ipsi	Arc	2
Paraventricular hypothalamic nucleus	ipsi	Pa	1
Supraoptic nucleus [Supraoptic region]	ipsi	SO	1
Supramammillar nucleus	ipsi	SuM	1
Retrochiasmatic area	ipsi	RCh	0
Supraoculomotor periaqueductal gray	ipsi	Su3	1
Bed nucleus of the stria terminalis	ipsi	BST	0
Bed nucleus of the stria terminalis lateral division	ipsi	BSTL	3
Prelimbic cortex	ipsi	PrL	0
Infralimbic cortex	ipsi	IL	0
Ventrolateral periaqueductal gray	contra	VLPAG	1
Tuberomammillary nucleus dorsomedial part	contra	TBMdm	0.5
Tuberomammillary nucleus ventrolateral part	contra	TBMvl	0.5
Ventral tuberomammillary nucleus	contra	VTM	0.5
Caudal tuberomammillary nucleus	contra	TuMC	0.5

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong