University of Rostock

Department of Anatomy

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Rat connectome



Substantia nigra reticular part lateral tier right


Abbreviation
SNRL
Color       
Superior regionsSubstantia nigra reticular part

SynonymsAbbr.Language
Substantia nigra reticular part lateral tierSNRL 
Lateralmost substantia nigra pars reticulata  
Lateralmost substantia nigra pars reticularis  

SubregionsSide
Middle third of the substantia nigra reticular part lateral tierright
Rostral half of the lateral part of the Substantia nigra reticular partright
Substantia nigra reticular part lateral halfright

Output to

NameSideAbbr.WeightDetails
Paralemniscal nucleusipsiPL-0.5
Periaqueductal grayipsiPAG2
Superior colliculusipsiSC-0.5
Superior colliculus deep layersipsiSCd-0.5
Substantia nigra A9ipsiSN-0.5
Substantia nigra compact partipsiSNC0
Substantia nigra lateral partipsiSNL0
Ventral tegmental area A10ipsiVTA0
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Reticular systemipsiRF2
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus oral part central partipsiPnOC-0.5
Cuneiforme nucleus caudal partipsiCnFc-0.5
Gigantocellular reticular nucleusipsiGi1
Medullary reticular nucleusipsiMdD-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Ventromedial thalamic nucleusipsiVM0.5
Caudate putamenipsiCPu1
Caudal striatumipsiCPuc-0.5
Medial part of caudalmost striatumipsiCPumcm1.5
Caudate putamen basal partipsiCPuBa1
Rostral striatumipsiCPur1
Caudate putamen rostrobasal partipsiCPurb1
Lateral striatumipsiCPul-0.5

Input from

NameSideAbbr.WeightDetails
Parvicellular nucleus of the pontomedullary reticular formationipsiMPRFp-0.5
Caudal globus pallidusipsiGPc2
Medial globus pallidusipsiMGP0.5
Caudate putamenipsiCPu-0.5
Medial part of caudalmost striatumipsiCPumcm3
Dorsal striatumipsiCPud2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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